Guide Gene

Gene ID
Mapoly0029s0042
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006355] regulation of transcription, DNA-dependent; [PF00382] Transcription factor TFIIB repeat; [GO:0006352] DNA-dependent transcription, initiation; [K03124] transcription initiation factor TFIIB; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [PTHR11618:SF13] TRANSCRIPTION INITIATION FACTOR IIB; [KOG1597] Transcription initiation factor TFIIB; [GO:0017025] TBP-class protein binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0029s0042 [GO:0006355] regulation of transcription, DNA-dependent; [PF00382] Transcription factor TFIIB repeat; [GO:0006352] DNA-dependent transcription, initiation; [K03124] transcription initiation factor TFIIB; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [PTHR11618:SF13] TRANSCRIPTION INITIATION FACTOR IIB; [KOG1597] Transcription initiation factor TFIIB; [GO:0017025] TBP-class protein binding 0.00 1.0000
1 Mapoly0014s0060 [GO:0003677] DNA binding; [PF00046] Homeobox domain; [PTHR24326] FAMILY NOT NAMED; [PTHR24326:SF67] SUBFAMILY NOT NAMED; [KOG0492] Transcription factor MSH, contains HOX domain1.000.7412
2 Mapoly0039s0092 [GO:0003677] DNA binding; [KOG2732] DNA polymerase delta, regulatory subunit 55; [GO:0006260] DNA replication; [PTHR10416] DNA POLYMERASE DELTA SUBUNIT 2; [PF04042] DNA polymerase alpha/epsilon subunit B; [GO:0003887] DNA-directed DNA polymerase activity; [PTHR10416:SF0] DNA POLYMERASE DELTA SUBUNIT 2; [K02328] DNA polymerase delta subunit 23.740.6327
3 Mapoly0027s0072 [PF13716] Divergent CRAL/TRIO domain; [KOG2633] Hismacro and SEC14 domain-containing proteins; [PTHR11106] GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED4.240.7388
4 Mapoly0082s0063 [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [KOG0496] Beta-galactosidase; [GO:0005975] carbohydrate metabolic process; [PF02140] Galactose binding lectin domain; [GO:0030246] carbohydrate binding; [PTHR23421] BETA-GALACTOSIDASE RELATED; [PF01301] Glycosyl hydrolases family 354.900.7252
5 Mapoly0068s0035 -5.660.6291
6 Mapoly0069s0030 [PF03735] ENT domain; [KOG4675] Uncharacterized conserved protein, contains ENT domain5.660.7069
7 Mapoly0015s0203 -8.060.7033
8 Mapoly0001s0510 [PTHR12677] UNCHARACTERIZED; [KOG3140] Predicted membrane protein; [PF09335] SNARE associated Golgi protein8.830.6390
9 Mapoly0168s0005 [PTHR14255:SF4] SUBFAMILY NOT NAMED; [PTHR14255] ATP-DEPENDENT PROTEASE (CEREBLON); [KOG1400] Predicted ATP-dependent protease PIL, contains LON domain; [GO:0004176] ATP-dependent peptidase activity; [K11793] cereblon; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis8.940.6703
10 Mapoly0102s0004 -10.390.6687
11 Mapoly0009s0167 [PF12483] E3 Ubiquitin ligase; [KOG1571] Predicted E3 ubiquitin ligase; [GO:0004842] ubiquitin-protein ligase activity; [GO:0007005] mitochondrion organization; [PF13920] Zinc finger, C3HC4 type (RING finger); [PTHR12183] UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN10.680.7016
12 Mapoly0051s0007 [PF06047] Ras-induced vulval development antagonist; [KOG2812] Uncharacterized conserved protein; [PTHR13087] NF-KAPPA B ACTIVATING PROTEIN11.490.6417
13 Mapoly0130s0028 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED12.000.6120
14 Mapoly0063s0079 [KOG3974] Predicted sugar kinase; [PF01256] Carbohydrate kinase; [PTHR12592] UNCHARACTERIZED18.330.5532
15 Mapoly0004s0239 [PF07063] Domain of unknown function (DUF1338); [PTHR31136] FAMILY NOT NAMED18.710.6707
16 Mapoly0127s0040 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [K09699] 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]; [PF00364] Biotin-requiring enzyme; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain; [KOG0558] Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit); [2.3.1.168] Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase.18.710.6664
17 Mapoly0189s0007 -19.180.5674
18 Mapoly0063s0065 [PTHR23177:SF1] MKIAA1688 PROTEIN; [PTHR23177] MKIAA1688 PROTEIN; [PF00784] MyTH4 domain; [GO:0005856] cytoskeleton19.620.6652
19 Mapoly0184s0013 -20.350.6208
20 Mapoly0079s0072 [GO:0008270] zinc ion binding; [PF12428] Protein of unknown function (DUF3675); [PF12906] RING-variant domain; [PTHR23012] MEMBRANE ASSOCIATED RING FINGER21.560.6307
21 Mapoly0124s0043 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED22.230.6268
22 Mapoly0048s0012 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [PTHR10168] GLUTAREDOXIN; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity27.500.6073
23 Mapoly0024s0085 [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR10696] GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; [PF02668] Taurine catabolism dioxygenase TauD, TfdA family28.140.6271
24 Mapoly0036s0098 [GO:0005516] calmodulin binding; [PF07839] Plant calmodulin-binding domain28.810.5328
25 Mapoly0070s0086 [PF07748] Glycosyl hydrolases family 38 C-terminal domain; [3.2.1.24] Alpha-mannosidase.; [GO:0015923] mannosidase activity; [KOG1959] Glycosyl hydrolase, family 38 - alpha-mannosidase; [PTHR11607] ALPHA-MANNOSIDASE; [GO:0004559] alpha-mannosidase activity; [GO:0006013] mannose metabolic process; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [PF09261] Alpha mannosidase, middle domain; [GO:0005975] carbohydrate metabolic process; [GO:0008270] zinc ion binding; [PF01074] Glycosyl hydrolases family 38 N-terminal domain; [K01191] alpha-mannosidase [EC:3.2.1.24]33.820.6079
26 Mapoly0028s0025 [GO:0005097] Rab GTPase activator activity; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain34.640.5646
27 Mapoly0095s0067 -35.000.6114
28 Mapoly0079s0061 [PTHR12736:SF7] SUBFAMILY NOT NAMED; [PF05147] Lanthionine synthetase C-like protein; [KOG2787] Lanthionine synthetase C-like protein 1; [PTHR12736] LANC-LIKE PROTEIN37.950.6034
29 Mapoly0012s0124 [GO:0004174] electron-transferring-flavoprotein dehydrogenase activity; [PF13450] NAD(P)-binding Rossmann-like domain; [GO:0055114] oxidation-reduction process; [K00311] electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE; [1.5.5.1] Electron-transferring-flavoprotein dehydrogenase.; [PF05187] Electron transfer flavoprotein-ubiquinone oxidoreductase; [KOG2415] Electron transfer flavoprotein ubiquinone oxidoreductase38.610.6213
30 Mapoly0022s0025 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [KOG0595] Serine/threonine-protein kinase involved in autophagy; [K08269] unc51-like kinase [EC:2.7.11.1]; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PTHR24348] SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED39.800.5282
31 Mapoly0001s0505 [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat40.500.6249
32 Mapoly0071s0022 [PF14901] Cleavage inducing molecular chaperone; [KOG0720] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER42.740.6039
33 Mapoly0011s0039 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [K08869] aarF domain-containing kinase43.630.5966
34 Mapoly0016s0015 [PTHR12277] UNCHARACTERIZED; [KOG1552] Predicted alpha/beta hydrolase; [PF12695] Alpha/beta hydrolase family44.160.5372
35 Mapoly0050s0017 [PTHR31587] FAMILY NOT NAMED; [PF10225] Uncharacterized conserved protein (DUF2215)44.180.5991
36 Mapoly0078s0002 [KOG1417] Homogentisate 1,2-dioxygenase; [GO:0055114] oxidation-reduction process; [PTHR11056:SF0] HOMOGENTISATE 1,2-DIOXYGENASE; [PTHR11056] HOMOGENTISATE 1,2-DIOXYGENASE; [GO:0006559] L-phenylalanine catabolic process; [PF04209] homogentisate 1,2-dioxygenase; [GO:0004411] homogentisate 1,2-dioxygenase activity; [GO:0006570] tyrosine metabolic process44.790.6285
37 Mapoly0001s0243 -45.900.5713
38 Mapoly0100s0012 [PF08879] WRC47.370.5455
39 Mapoly0051s0037 [PF07714] Protein tyrosine kinase; [KOG0198] MEKK and related serine/threonine protein kinases; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR22967] SERINE/THREONINE PROTEIN KINASE47.830.6211
40 Mapoly0020s0030 [PF15346] Arginine and glutamate-rich 1; [PTHR31711] FAMILY NOT NAMED53.440.6063
41 Mapoly0004s0292 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity54.710.5780
42 Mapoly0122s0015 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding55.700.5468
43 Mapoly0031s0135 [KOG2944] Glyoxalase; [PTHR10374:SF1] LACTOYLGLUTATHIONE LYASE; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [PF12681] Glyoxalase-like domain57.050.5959
44 Mapoly0204s0006 -59.450.6019
45 Mapoly0067s0002 [PTHR11019:SF4] THIJ-RELATED; [PF01965] DJ-1/PfpI family; [K03152] 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis; [PTHR11019] THIJ/PFPI; [KOG2764] Putative transcriptional regulator DJ-160.600.5560
46 Mapoly0075s0015 [PTHR14732:SF0] SUBFAMILY NOT NAMED; [PTHR14732] UNCHARACTERIZED; [PF04181] Rtr1/RPAP2 family60.880.5124
47 Mapoly0068s0036 [PTHR10457] MEVALONATE KINASE/GALACTOKINASE; [GO:0005524] ATP binding; [KOG0631] Galactokinase; [PF10509] Galactokinase galactose-binding signature; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [PTHR10457:SF7] GALACTOKINASE 261.970.5051
48 Mapoly0048s0107 [PTHR14110:SF5] gb def: T22K18.6 protein; [PF02466] Tim17/Tim22/Tim23/Pmp24 family; [PTHR14110] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM2262.030.5181
49 Mapoly0001s0130 [PTHR13914] PROLINE OXIDASE; [K00318] proline dehydrogenase [EC:1.5.99.8]; [GO:0004657] proline dehydrogenase activity; [KOG0186] Proline oxidase; [PTHR13914:SF0] SUBFAMILY NOT NAMED; [PF01619] Proline dehydrogenase; [GO:0006562] proline catabolic process; [1.5.99.8] Proline dehydrogenase.62.230.5712
50 Mapoly0079s0033 -62.560.5848
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