Guide Gene

Gene ID
Mapoly0122s0055
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0031625] ubiquitin protein ligase binding; [PTHR11932:SF5] ANAPHASE-PROMOTING COMPLEX SUBUNIT 2; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03349] anaphase-promoting complex subunit 2; [KOG2165] Anaphase-promoting complex (APC), subunit 2; [PTHR11932] CULLIN; [PF00888] Cullin family; [PF08672] Anaphase promoting complex (APC) subunit 2

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0040 [PTHR12466:SF8] SUBFAMILY NOT NAMED; [PF05179] RNA pol II accessory factor, Cdc73 family; [KOG3786] RNA polymerase II assessory factor Cdc73p; [PTHR12466] CDC73 DOMAIN PROTEIN
Mapoly0002s0046 [PF07986] Tubulin binding cofactor C; [KOG2512] Beta-tubulin folding cofactor C; [PTHR15139] TUBULIN FOLDING COFACTOR C; [GO:0007023] post-chaperonin tubulin folding pathway
Mapoly0008s0195 [PTHR13304] GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN; [PF04114] Gaa1-like, GPI transamidase component; [GO:0016021] integral to membrane; [PTHR13304:SF0] SUBFAMILY NOT NAMED; [GO:0042765] GPI-anchor transamidase complex; [K05289] glycosylphosphatidylinositol transamidase; [KOG3566] Glycosylphosphatidylinositol anchor attachment protein GAA1
Mapoly0009s0169 [GO:0006355] regulation of transcription, DNA-dependent; [PF04494] WD40 associated region in TFIID subunit; [GO:0005515] protein binding; [K03130] transcription initiation factor TFIID subunit 5; [GO:0005634] nucleus; [PTHR19879] TRANSCRIPTION INITIATION FACTOR TFIID; [KOG0263] Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA); [PTHR19879:SF1] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat
Mapoly0011s0185 [KOG0919] C-5 cytosine-specific DNA methylase; [GO:0008168] methyltransferase activity; [PTHR10629] CYTOSINE-SPECIFIC METHYLTRANSFERASE; [K00558] DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]; [PF00145] C-5 cytosine-specific DNA methylase; [2.1.1.37] DNA (cytosine-5-)-methyltransferase.
Mapoly0016s0042 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG4393] Predicted pseudouridylate synthase; [PTHR11142:SF1] PSEUDOURIDYLATE SYNTHASE-RELATED; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase.
Mapoly0019s0056 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family
Mapoly0027s0100 [PTHR21678] GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88
Mapoly0031s0053 [PF12796] Ankyrin repeats (3 copies); [PTHR24142] FAMILY NOT NAMED
Mapoly0032s0049 [KOG0144] RNA-binding protein CUGBP1/BRUNO (RRM superfamily); [GO:0003676] nucleic acid binding; [PTHR24622] FAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Mapoly0039s0104 [GO:0006396] RNA processing; [3.1.26.5] Ribonuclease P.; [GO:0004526] ribonuclease P activity; [PF06978] Ribonucleases P/MRP protein subunit POP1; [K01164] ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]; [GO:0001682] tRNA 5'-leader removal; [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT; [PF08170] POPLD (NUC188) domain
Mapoly0056s0054 [GO:0006506] GPI anchor biosynthetic process; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K03857] phosphatidylinositol glycan, class A [EC:2.4.1.198]; [PTHR12526] GLYCOSYLTRANSFERASE; [KOG1111] N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase; [2.4.1.198] Phosphatidylinositol N-acetylglucosaminyltransferase.; [PF08288] PIGA (GPI anchor biosynthesis)
Mapoly0061s0123 [GO:0005515] protein binding; [PTHR19846] WD40 REPEAT PROTEIN; [KOG0272] U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats); [K12662] U4/U6 small nuclear ribonucleoprotein PRP4; [PF00400] WD domain, G-beta repeat; [PF08799] pre-mRNA processing factor 4 (PRP4) like
Mapoly0062s0011 [KOG2654] Uncharacterized conserved protein; [K13106] pre-mRNA-splicing factor CWC26; [PTHR31809] FAMILY NOT NAMED; [PF09736] Pre-mRNA-splicing factor of RES complex
Mapoly0064s0032 [GO:0005515] protein binding; [KOG1063] RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily; [PTHR13729] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [K11374] elongator complex protein 2; [PTHR13729:SF2] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [PF00400] WD domain, G-beta repeat
Mapoly0071s0030 [PF03725] 3' exoribonuclease family, domain 2; [K12586] exosome complex component RRP43; [PTHR11097:SF9] EXOSOME COMPLEX EXONUCLEASE RRP43 (RIBOSOMAL RNA PROCESSING PROTEIN 43); [PTHR11097] EXOSOME COMPLEX EXONUCLEASE (RIBOSOMAL RNA PROCESSING PROTEIN); [PF01138] 3' exoribonuclease family, domain 1; [KOG1613] Exosomal 3'-5' exoribonuclease complex, subunit Rrp43
Mapoly0084s0050 [PTHR10751] GUANYLATE BINDING PROTEIN; [PF02263] Guanylate-binding protein, N-terminal domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding
Mapoly0090s0009 [PTHR13130] 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED; [PF11571] Mediator complex subunit 27
Mapoly0107s0026 [GO:0003723] RNA binding; [GO:0005737] cytoplasm; [K12839] survival of motor neuron-related-splicing factor 30; [GO:0006397] mRNA processing; [KOG3026] Splicing factor SPF30; [GO:0005634] nucleus; [PF06003] Survival motor neuron protein (SMN); [PTHR12664] SURVIVAL MOTOR NEURON PROTEIN
Mapoly0122s0055 [GO:0031625] ubiquitin protein ligase binding; [PTHR11932:SF5] ANAPHASE-PROMOTING COMPLEX SUBUNIT 2; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03349] anaphase-promoting complex subunit 2; [KOG2165] Anaphase-promoting complex (APC), subunit 2; [PTHR11932] CULLIN; [PF00888] Cullin family; [PF08672] Anaphase promoting complex (APC) subunit 2
Mapoly0161s0009 [GO:0003723] RNA binding; [PTHR13452] THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; [PF02926] THUMP domain