Guide Gene

Gene ID
Mapoly0121s0023
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003723] RNA binding; [KOG3298] DNA-directed RNA polymerase subunit E'; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [PF00575] S1 RNA binding domain; [K03015] DNA-directed RNA polymerase II subunit RPB7; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0121s0023 [GO:0003723] RNA binding; [KOG3298] DNA-directed RNA polymerase subunit E'; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [PF00575] S1 RNA binding domain; [K03015] DNA-directed RNA polymerase II subunit RPB7; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III 0.00 1.0000
1 Mapoly0027s0126 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [K02981] small subunit ribosomal protein S2e; [PF03719] Ribosomal protein S5, C-terminal domain11.620.8030
2 Mapoly0065s0096 [KOG3493] Ubiquitin-like protein; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR13042] FAMILY NOT NAMED; [K13113] ubiquitin-like protein 519.290.7804
3 Mapoly0087s0053 [PF10294] Putative methyltransferase; [PTHR13539] UNCHARACTERIZED; [KOG3201] Uncharacterized conserved protein21.070.7077
4 Mapoly0014s0206 -29.700.7781
5 Mapoly0009s0154 [GO:0005840] ribosome; [GO:0005515] protein binding; [GO:0003735] structural constituent of ribosome; [KOG0004] Ubiquitin/40S ribosomal protein S27a fusion; [GO:0005622] intracellular; [PF01599] Ribosomal protein S27a; [PF00240] Ubiquitin family; [K02977] small subunit ribosomal protein S27Ae; [PTHR10666] UBIQUITIN; [GO:0006412] translation30.850.7730
6 Mapoly0151s0024 [GO:0000103] sulfate assimilation; [GO:0005524] ATP binding; [K00860] adenylylsulfate kinase [EC:2.7.1.25]; [PTHR11055] ADENYLSULFATE KINASE/SULFATE ADENYLTRANSFERASE; [2.7.1.25] Adenylyl-sulfate kinase.; [KOG0635] Adenosine 5'-phosphosulfate kinase; [GO:0004020] adenylylsulfate kinase activity; [PF01583] Adenylylsulphate kinase33.050.7236
7 Mapoly0047s0085 [GO:0005840] ribosome; [PF00238] Ribosomal protein L14p/L23e; [GO:0003735] structural constituent of ribosome; [KOG0901] 60S ribosomal protein L14/L17/L23; [PTHR11761] 50S/60S RIBOSOMAL PROTEIN L14/L23; [GO:0006412] translation36.910.7710
8 Mapoly0065s0019 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [K02905] large subunit ribosomal protein L29e; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR12884] 60S RIBOSOMAL PROTEIN L29; [PF01779] Ribosomal L29e protein family37.550.7730
9 Mapoly0003s0284 [GO:0005840] ribosome; [GO:0005515] protein binding; [GO:0003735] structural constituent of ribosome; [KOG0004] Ubiquitin/40S ribosomal protein S27a fusion; [GO:0005622] intracellular; [PF01599] Ribosomal protein S27a; [PF00240] Ubiquitin family; [K02977] small subunit ribosomal protein S27Ae; [PTHR10666] UBIQUITIN; [GO:0006412] translation46.480.7654
10 Mapoly0004s0156 [GO:0005840] ribosome; [PF01200] Ribosomal protein S28e; [GO:0003735] structural constituent of ribosome; [K02979] small subunit ribosomal protein S28e; [GO:0005622] intracellular; [KOG3502] 40S ribosomal protein S28; [PTHR10769] 40S RIBOSOMAL PROTEIN S28; [GO:0006412] translation46.880.7660
11 Mapoly0013s0067 [PTHR13078] FAMILY NOT NAMED; [PF01575] MaoC like domain48.810.5979
12 Mapoly0052s0059 [GO:0005801] cis-Golgi network; [PF04099] Sybindin-like family; [KOG3368] Transport protein particle (TRAPP) complex subunit; [PTHR23249] SYNBINDIN; [GO:0006888] ER to Golgi vesicle-mediated transport51.280.7642
13 Mapoly0052s0065 [GO:0005840] ribosome; [K02889] large subunit ribosomal protein L21e; [PTHR20981] 60S RIBOSOMAL PROTEIN L21; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG1732] 60S ribosomal protein L21; [GO:0006412] translation; [PF01157] Ribosomal protein L21e51.790.7649
14 Mapoly0002s0311 [K01669] deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]; [GO:0003913] DNA photolyase activity; [KOG0133] Deoxyribodipyrimidine photolyase/cryptochrome; [PTHR11455] CRYPTOCHROME; [PF00875] DNA photolyase; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair; [4.1.99.3] Deoxyribodipyrimidine photo-lyase.52.650.7036
15 Mapoly0033s0120 [PF00887] Acyl CoA binding protein; [GO:0000062] fatty-acyl-CoA binding; [PTHR23310] ACYL-COA-BINDING PROTEIN, ACBP53.440.7563
16 Mapoly0057s0081 [PTHR12174] SIGNAL PEPTIDE PEPTIDASE; [GO:0016021] integral to membrane; [PF04258] Signal peptide peptidase; [KOG2443] Uncharacterized conserved protein; [GO:0004190] aspartic-type endopeptidase activity; [3.4.23.-] Aspartic endopeptidases.; [K09595] minor histocompatibility antigen H13 [EC:3.4.23.-]54.170.6899
17 Mapoly0033s0117 [PTHR11721:SF3] SUBFAMILY NOT NAMED; [PF00828] Ribosomal protein L18e/L15; [PTHR11721] 60S RIBOSOMAL PROTEIN L27A; [K02900] large subunit ribosomal protein L27Ae; [KOG1742] 60s ribosomal protein L15/L2754.900.7637
18 Mapoly0084s0084 [PF01221] Dynein light chain type 1; [GO:0005875] microtubule associated complex; [GO:0007017] microtubule-based process; [KOG3430] Dynein light chain type 1; [PTHR11886] DYNEIN LIGHT CHAIN; [K10418] dynein light chain LC8-type56.500.7244
19 Mapoly0020s0150 [GO:0005840] ribosome; [KOG3418] 60S ribosomal protein L27; [PF01777] Ribosomal L27e protein family; [K02901] large subunit ribosomal protein L27e; [PTHR10497] 60S RIBOSOMAL PROTEIN L27; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR10497:SF0] 60S RIBOSOMAL PROTEIN L27; [GO:0006412] translation59.700.7596
20 Mapoly0077s0052 -64.650.7540
21 Mapoly0148s0016 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG1790] 60s ribosomal protein L34; [GO:0005622] intracellular; [PTHR10759] 60S RIBOSOMAL PROTEIN L34; [K02915] large subunit ribosomal protein L34e; [GO:0006412] translation; [PF01199] Ribosomal protein L34e65.020.7577
22 Mapoly0036s0018 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [K02960] small subunit ribosomal protein S16e; [GO:0006412] translation66.680.7586
23 Mapoly0055s0071 [GO:0005840] ribosome; [PF01294] Ribosomal protein L13e; [GO:0003735] structural constituent of ribosome; [PTHR11722] 60S RIBOSOMAL PROTEIN L13; [GO:0005622] intracellular; [PTHR11722:SF0] SUBFAMILY NOT NAMED; [K02873] large subunit ribosomal protein L13e; [KOG3295] 60S Ribosomal protein L13; [GO:0006412] translation72.880.7565
24 Mapoly0073s0056 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG3252] Uncharacterized conserved protein; [PTHR13022] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family73.690.7566
25 Mapoly0015s0153 [GO:0005840] ribosome; [K02973] small subunit ribosomal protein S23e; [GO:0003735] structural constituent of ribosome; [PF00164] Ribosomal protein S12/S23; [GO:0005622] intracellular; [KOG1749] 40S ribosomal protein S23; [PTHR11652] 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER; [GO:0006412] translation76.500.7544
26 Mapoly0083s0020 [GO:0005840] ribosome; [KOG1754] 40S ribosomal protein S15/S22; [PTHR11758] 30S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [K02957] small subunit ribosomal protein S15Ae; [PF00410] Ribosomal protein S8; [GO:0006412] translation77.070.7549
27 Mapoly0080s0013 [GO:0003677] DNA binding; [PTHR10840] PROGRAMMED CELL DEATH PROTEIN 5; [KOG3431] Apoptosis-related protein/predicted DNA-binding protein; [PF01984] Double-stranded DNA-binding domain78.490.7482
28 Mapoly0016s0064 [PTHR21385:SF0] SUBFAMILY NOT NAMED; [PTHR21385] ZINC FINGER PROTEIN-RELATED78.940.6945
29 Mapoly0001s0230 [3.6.3.14] H(+)-transporting two-sector ATPase.; [PF04627] Mitochondrial ATP synthase epsilon chain; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [KOG3495] Mitochondrial F1F0-ATP synthase, subunit epsilon/ATP15; [GO:0015986] ATP synthesis coupled proton transport; [PTHR12448] ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL; [K02135] F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]; [GO:0000275] mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); [PTHR12448:SF0] SUBFAMILY NOT NAMED80.960.7521
30 Mapoly0001s0014 [GO:0005840] ribosome; [GO:0003723] RNA binding; [KOG3181] 40S ribosomal protein S3; [PF07650] KH domain; [PF00189] Ribosomal protein S3, C-terminal domain; [GO:0006412] translation; [K02985] small subunit ribosomal protein S3e; [GO:0003735] structural constituent of ribosome; [PTHR11760] 30S/40S RIBOSOMAL PROTEIN S381.240.7535
31 Mapoly0158s0031 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [K02969] small subunit ribosomal protein S20e; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e82.460.7542
32 Mapoly0044s0132 [GO:0005840] ribosome; [K02953] small subunit ribosomal protein S13e; [PTHR11885] RIBOSOMAL PROTEIN S15P/S13E; [KOG0400] 40S ribosomal protein S13; [PF00312] Ribosomal protein S15; [PF08069] Ribosomal S13/S15 N-terminal domain; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation82.850.7500
33 Mapoly0015s0101 [PTHR31134] FAMILY NOT NAMED83.140.7494
34 Mapoly1100s0002 [GO:0042254] ribosome biogenesis; [KOG1723] 60s ribosomal protein L30 isolog; [K02896] large subunit ribosomal protein L24e; [PF01246] Ribosomal protein L24e; [PTHR10792] 60S RIBOSOMAL PROTEIN L2487.660.7499
35 Mapoly0014s0159 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PTHR10496] 40S RIBOSOMAL PROTEIN S24; [PF01282] Ribosomal protein S24e; [GO:0005622] intracellular; [K02974] small subunit ribosomal protein S24e; [GO:0006412] translation; [KOG3424] 40S ribosomal protein S2488.990.7519
36 Mapoly0063s0067 [PTHR10072:SF31] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN; [PTHR10072] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN; [KOG1120] Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain); [K13628] iron-sulfur cluster assembly protein; [PF01521] Iron-sulphur cluster biosynthesis91.900.7439
37 Mapoly0026s0131 [GO:0005840] ribosome; [PF01907] Ribosomal protein L37e; [K02922] large subunit ribosomal protein L37e; [PTHR10768] 60S RIBOSOMAL PROTEIN L37; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3475] 60S ribosomal protein L37; [GO:0006412] translation94.070.7504
38 Mapoly0148s0030 [K03945] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 1 [EC:1.6.5.3 1.6.99.3]; [1.6.99.3] NADH dehydrogenase.; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [PTHR17098] NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT95.530.7499
39 Mapoly0007s0048 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain95.540.7499
40 Mapoly0046s0044 [PF10247] Reactive mitochondrial oxygen species modulator 1; [KOG4096] Uncharacterized conserved protein99.330.7484
41 Mapoly0003s0256 [GO:0005840] ribosome; [K02912] large subunit ribosomal protein L32e; [KOG0878] 60S ribosomal protein L32; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N; [PF01655] Ribosomal protein L3299.800.7497
42 Mapoly0020s0123 [PTHR12642] FAMILY NOT NAMED; [PTHR12642:SF0] SUBFAMILY NOT NAMED; [KOG3163] Uncharacterized conserved protein related to ribosomal protein S8E; [PF01201] Ribosomal protein S8e99.860.7480
43 Mapoly0102s0008 [GO:0005840] ribosome; [KOG0893] 60S ribosomal protein L31; [PTHR10956] 60S RIBOSOMAL PROTEIN L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01198] Ribosomal protein L31e; [K02910] large subunit ribosomal protein L31e; [GO:0006412] translation100.490.7483
44 Mapoly0149s0032 -101.490.6746
45 Mapoly0072s0064 [PTHR12718] CELL CYCLE CONTROL PROTEIN CWF15; [K12863] protein CWC15; [GO:0005681] spliceosomal complex; [GO:0000398] mRNA splicing, via spliceosome; [PF04889] Cwf15/Cwc15 cell cycle control protein; [KOG3228] Uncharacterized conserved protein103.730.7343
46 Mapoly0086s0038 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation104.460.7491
47 Mapoly0003s0161 [GO:0005840] ribosome; [PTHR11843] 40S RIBOSOMAL PROTEIN S12; [GO:0003735] structural constituent of ribosome; [KOG3406] 40S ribosomal protein S12; [GO:0005622] intracellular; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [GO:0006412] translation; [K02951] small subunit ribosomal protein S12e110.270.7474
48 Mapoly0107s0014 -113.140.7131
49 Mapoly0025s0101 [GO:0005840] ribosome; [K02929] large subunit ribosomal protein L44e; [PF00935] Ribosomal protein L44; [GO:0003735] structural constituent of ribosome; [KOG3464] 60S ribosomal protein L44; [PTHR10369] 60S RIBOSOMAL PROTEIN L36A/L44; [GO:0005622] intracellular; [PTHR10369:SF3] 60S RIBOSOMAL PROTEIN L44; [GO:0006412] translation114.470.7438
50 Mapoly0063s0011 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [K02983] small subunit ribosomal protein S30e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion116.530.7476
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