Guide Gene

Gene ID
Mapoly0108s0028
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003723] RNA binding; [GO:0003743] translation initiation factor activity; [GO:0031369] translation initiation factor binding; [GO:0003676] nucleic acid binding; [GO:0006413] translational initiation; [K03253] translation initiation factor eIF-3 subunit 9; [PTHR14068:SF0] SUBFAMILY NOT NAMED; [KOG2314] Translation initiation factor 3, subunit b (eIF-3b); [PTHR14068] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 (EIF3)-RELATED; [PF08662] Eukaryotic translation initiation factor eIF2A; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0108s0028 [GO:0003723] RNA binding; [GO:0003743] translation initiation factor activity; [GO:0031369] translation initiation factor binding; [GO:0003676] nucleic acid binding; [GO:0006413] translational initiation; [K03253] translation initiation factor eIF-3 subunit 9; [PTHR14068:SF0] SUBFAMILY NOT NAMED; [KOG2314] Translation initiation factor 3, subunit b (eIF-3b); [PTHR14068] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 (EIF3)-RELATED; [PF08662] Eukaryotic translation initiation factor eIF2A; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000
1 Mapoly0005s0129 [KOG0466] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase); [PF00009] Elongation factor Tu GTP binding domain; [PF09173] Initiation factor eIF2 gamma, C terminal; [PTHR23115:SF9] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT (EIF-2- GAMMA); [GO:0003924] GTPase activity; [K03242] translation initiation factor eIF-2 gamma subunit; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 21.000.8287
2 Mapoly0044s0032 [PTHR12299] HYALURONIC ACID-BINDING PROTEIN 4; [PF09598] Stm1; [KOG2945] Predicted RNA-binding protein; [PF04774] Hyaluronan / mRNA binding family; [K13199] plasminogen activator inhibitor 1 RNA-binding protein6.160.7834
3 Mapoly0001s0474 [PTHR24012] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K11294] nucleolin; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG0148] Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily)19.000.7127
4 Mapoly0067s0081 [GO:0003723] RNA binding; [K13126] polyadenylate-binding protein; [PF00658] Poly-adenylate binding protein, unique domain; [KOG0123] Polyadenylate-binding protein (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)19.340.7210
5 Mapoly0116s0033 [GO:0005840] ribosome; [PTHR19431] 60S RIBOSOMAL PROTEIN L4; [K02930] large subunit ribosomal protein L4e; [KOG1475] Ribosomal protein RPL1/RPL2/RL4L4; [GO:0003735] structural constituent of ribosome; [PF00573] Ribosomal protein L4/L1 family; [GO:0006412] translation; [PF14374] 60S ribosomal protein L4 C-terminal domain20.250.6959
6 Mapoly0059s0037 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [PTHR10352] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G; [PF12353] Eukaryotic translation initiation factor 3 subunit G; [K03248] translation initiation factor eIF-3 subunit 4; [GO:0003676] nucleic acid binding; [KOG0122] Translation initiation factor 3, subunit g (eIF-3g); [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)21.700.7690
7 Mapoly0012s0119 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PF00467] KOW motif; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG0378] 40S ribosomal protein S4; [PTHR11581] 30S/40S RIBOSOMAL PROTEIN S4; [PF08071] RS4NT (NUC023) domain; [GO:0006412] translation; [PF01479] S4 domain; [PF00900] Ribosomal family S4e; [K02987] small subunit ribosomal protein S4e24.190.7531
8 Mapoly0090s0083 [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PTHR23149] G PATCH DOMAIN CONTAINING PROTEIN26.190.6883
9 Mapoly0025s0055 [GO:0005840] ribosome; [GO:0015935] small ribosomal subunit; [PF00318] Ribosomal protein S2; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR11489] 40S RIBOSOMAL PROTEIN SA; [GO:0006412] translation; [KOG0830] 40S ribosomal protein SA (P40)/Laminin receptor 126.380.7586
10 Mapoly0189s0010 [PTHR15272:SF0] SUBFAMILY NOT NAMED; [PF12253] Chromatin assembly factor 1 subunit A; [PTHR15272] CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A (CAF-1 SUBUNIT A)28.430.7267
11 Mapoly0057s0064 [PF06273] Plant specific eukaryotic initiation factor 4B; [PTHR32091] FAMILY NOT NAMED34.120.6199
12 Mapoly0007s0280 [GO:0005737] cytoplasm; [KOG3677] RNA polymerase I-associated factor - PAF67; [GO:0003743] translation initiation factor activity; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF10255] RNA polymerase I-associated factor PAF67; [PTHR13242] EUKARYOTIC TRANSLATION INITIATION FACTOR 338.570.6810
13 Mapoly0037s0030 [GO:0005840] ribosome; [PF03868] Ribosomal protein L6, N-terminal domain; [PTHR10715] 60S RIBOSOMAL PROTEIN L6; [K02934] large subunit ribosomal protein L6e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01159] Ribosomal protein L6e; [GO:0006412] translation; [KOG1694] 60s ribosomal protein L639.040.7382
14 Mapoly0005s0116 [GO:0005840] ribosome; [PF01294] Ribosomal protein L13e; [GO:0003735] structural constituent of ribosome; [PTHR11722] 60S RIBOSOMAL PROTEIN L13; [GO:0005622] intracellular; [PTHR11722:SF0] SUBFAMILY NOT NAMED; [K02873] large subunit ribosomal protein L13e; [KOG3295] 60S Ribosomal protein L13; [GO:0006412] translation46.360.7359
15 Mapoly0009s0136 [PTHR24012] FAMILY NOT NAMED; [KOG0126] Predicted RNA-binding protein (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)47.730.7168
16 Mapoly0043s0009 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0042254] ribosome biogenesis; [GO:0003735] structural constituent of ribosome; [PTHR21141:SF3] 60S ACIDIC RIBOSOMAL PROTEIN P0; [KOG0815] 60S acidic ribosomal protein P0; [GO:0005622] intracellular; [K02941] large subunit ribosomal protein LP0; [PF00466] Ribosomal protein L10; [PF00428] 60s Acidic ribosomal protein48.500.7081
17 Mapoly0043s0105 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0042254] ribosome biogenesis; [GO:0003735] structural constituent of ribosome; [PTHR21141:SF3] 60S ACIDIC RIBOSOMAL PROTEIN P0; [KOG0815] 60S acidic ribosomal protein P0; [GO:0005622] intracellular; [K02941] large subunit ribosomal protein LP0; [PF00466] Ribosomal protein L10; [PF00428] 60s Acidic ribosomal protein50.790.7206
18 Mapoly0146s0045 [GO:0003723] RNA binding; [PTHR11207:SF1] RIBONUCLEASE III; [PF00035] Double-stranded RNA binding motif; [GO:0004525] ribonuclease III activity; [GO:0016075] rRNA catabolic process; [PTHR11207] RIBONUCLEASE III51.230.7191
19 Mapoly0006s0227 [PTHR12626:SF0] SUBFAMILY NOT NAMED; [PTHR12626] PROGRAMMED CELL DEATH 4; [KOG0403] Neoplastic transformation suppressor Pdcd4/MA-3, contains MA3 domain; [PF02847] MA3 domain52.800.6728
20 Mapoly0072s0006 [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG3166] 60S ribosomal protein L7A; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [PTHR23105:SF1] 60S RIBOSOMAL PROTEIN L7A; [K02936] large subunit ribosomal protein L7Ae55.560.7242
21 Mapoly0084s0048 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [KOG0552] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [PF03066] Nucleoplasmin56.120.7012
22 Mapoly0149s0014 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [PTHR10410:SF3] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [K03247] translation initiation factor eIF-3 subunit 3; [KOG1560] Translation initiation factor 3, subunit h (eIF-3h); [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [GO:0005852] eukaryotic translation initiation factor 3 complex57.240.7062
23 Mapoly0071s0013 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [K02981] small subunit ribosomal protein S2e; [PF03719] Ribosomal protein S5, C-terminal domain58.100.7178
24 Mapoly0030s0100 [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG3166] 60S ribosomal protein L7A; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [PTHR23105:SF1] 60S RIBOSOMAL PROTEIN L7A; [K02936] large subunit ribosomal protein L7Ae60.610.7089
25 Mapoly0033s0117 [PTHR11721:SF3] SUBFAMILY NOT NAMED; [PF00828] Ribosomal protein L18e/L15; [PTHR11721] 60S RIBOSOMAL PROTEIN L27A; [K02900] large subunit ribosomal protein L27Ae; [KOG1742] 60s ribosomal protein L15/L2762.050.7211
26 Mapoly0041s0056 [PTHR15351] FAMILY NOT NAMED; [KOG2962] Prohibitin-related membrane protease subunits; [PF01145] SPFH domain / Band 7 family62.860.7075
27 Mapoly0084s0051 [2.1.1.43] Histone-lysine N-methyltransferase.; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1079] Transcriptional repressor EZH1; [PTHR22884] SET DOMAIN PROTEINS; [K11430] enhancer of zeste [EC:2.1.1.43]65.050.6891
28 Mapoly0016s0131 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain67.360.7198
29 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing68.010.7076
30 Mapoly0045s0142 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding68.160.7087
31 Mapoly0099s0059 [GO:0005840] ribosome; [PF00181] Ribosomal Proteins L2, RNA binding domain; [PTHR13691:SF16] 50S RIBOSOMAL PROTEIN L2; [PF03947] Ribosomal Proteins L2, C-terminal domain; [PTHR13691] RIBOSOMAL PROTEIN L2; [GO:0003735] structural constituent of ribosome; [KOG2309] 60s ribosomal protein L2/L8; [GO:0005622] intracellular; [GO:0006412] translation77.420.7164
32 Mapoly0086s0038 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation78.040.7193
33 Mapoly0125s0012 [GO:0016020] membrane; [GO:0005524] ATP binding; [PF08370] Plant PDR ABC transporter associated; [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF14510] ABC-transporter extracellular N-terminal; [KOG0065] Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily; [PF00005] ABC transporter84.080.6773
34 Mapoly0024s0037 [K13151] snurportin-1; [KOG3132] m3G-cap-specific nuclear import receptor (Snurportin1); [PTHR13403:SF6] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1); [PTHR13403] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1)86.240.6178
35 Mapoly0015s0154 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L1387.860.7124
36 Mapoly0043s0043 [GO:0005840] ribosome; [KOG1678] 60s ribosomal protein L15; [GO:0003735] structural constituent of ribosome; [PTHR11847] RIBOSOMAL PROTEIN L15; [PF00827] Ribosomal L15; [K02877] large subunit ribosomal protein L15e; [GO:0006412] translation90.730.7109
37 Mapoly0011s0132 -91.190.6851
38 Mapoly0083s0025 [K01962] acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]; [PTHR22855] ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED; [GO:0006633] fatty acid biosynthetic process; [GO:0003989] acetyl-CoA carboxylase activity; [6.4.1.2] Acetyl-CoA carboxylase.; [GO:0009317] acetyl-CoA carboxylase complex; [PF03255] Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit92.990.6660
39 Mapoly0007s0188 [PTHR10317] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E; [KOG2758] Translation initiation factor 3, subunit e (eIF-3e); [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [K03250] translation initiation factor eIF-3 subunit 6; [PF09440] eIF3 subunit 6 N terminal domain; [PF01399] PCI domain; [GO:0005852] eukaryotic translation initiation factor 3 complex93.950.6686
40 Mapoly0034s0037 [K09667] polypeptide N-acetylglucosaminyltransferase [EC:2.4.1.-]; [KOG4626] O-linked N-acetylglucosamine transferase OGT; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00515] Tetratricopeptide repeat; [PF13844] Glycosyl transferase family 41; [2.4.1.-] Hexosyltransferases.; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR94.350.6512
41 Mapoly0028s0094 [GO:0005840] ribosome; [PF03939] Ribosomal protein L23, N-terminal domain; [K02893] large subunit ribosomal protein L23Ae; [GO:0003735] structural constituent of ribosome; [KOG1751] 60s ribosomal protein L23; [PF00276] Ribosomal protein L23; [PTHR11620] 60S RIBOSOMAL PROTEIN L23A; [GO:0006412] translation96.110.7048
42 Mapoly0077s0024 [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED99.000.6647
43 Mapoly0012s0120 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PF00467] KOW motif; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG0378] 40S ribosomal protein S4; [PTHR11581] 30S/40S RIBOSOMAL PROTEIN S4; [PF08071] RS4NT (NUC023) domain; [GO:0006412] translation; [PF01479] S4 domain; [PF00900] Ribosomal family S4e; [K02987] small subunit ribosomal protein S4e100.320.7033
44 Mapoly0097s0065 [PTHR15350:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 7; [GO:0005515] protein binding; [PF01399] PCI domain; [PTHR15350] COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17; [KOG2753] Uncharacterized conserved protein, contains PCI domain100.680.6846
45 Mapoly0037s0139 [K02989] small subunit ribosomal protein S5e; [PTHR11205] RIBOSOMAL PROTEIN S7; [KOG3291] Ribosomal protein S7; [PF00177] Ribosomal protein S7p/S5e; [GO:0006412] translation103.530.7067
46 Mapoly0056s0041 [K04382] protein phosphatase 2 (formerly 2A), catalytic subunit [EC:3.1.3.16]; [PTHR11668] SERINE/THREONINE PROTEIN PHOSPHATASE; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [KOG0371] Serine/threonine protein phosphatase 2A, catalytic subunit; [3.1.3.16] Phosphoprotein phosphatase.105.100.6889
47 Mapoly0141s0015 [PTHR24412] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif105.470.6158
48 Mapoly0167s0015 [KOG1076] Translation initiation factor 3, subunit c (eIF-3c); [K03252] translation initiation factor eIF-3 subunit 8; [PF05470] Eukaryotic translation initiation factor 3 subunit 8 N-terminus; [PTHR13937:SF0] SUBFAMILY NOT NAMED; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [PTHR13937] EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 (EIF3S8)-RELATED; [GO:0031369] translation initiation factor binding; [PF01399] PCI domain; [GO:0006413] translational initiation; [GO:0005852] eukaryotic translation initiation factor 3 complex107.750.6709
49 Mapoly0179s0022 [PTHR10857] COPINE; [PF10539] Development and cell death domain107.980.6574
50 Mapoly0004s0112 -108.930.6626
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