Guide Gene

Gene ID
Mapoly0102s0026
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003677] DNA binding; [GO:0000786] nucleosome; [GO:0005634] nucleus; [KOG1744] Histone H2B; [PF00125] Core histone H2A/H2B/H3/H4; [K11252] histone H2B; [PTHR23428] HISTONE H2B

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0102s0026 [GO:0003677] DNA binding; [GO:0000786] nucleosome; [GO:0005634] nucleus; [KOG1744] Histone H2B; [PF00125] Core histone H2A/H2B/H3/H4; [K11252] histone H2B; [PTHR23428] HISTONE H2B 0.00 1.0000
1 Mapoly0111s0046 [PF00581] Rhodanese-like domain; [PTHR18838:SF17] UNCHARACTERIZED; [PTHR18838] RHODANESE-LIKE DOMAIN-CONTAINING3.320.7925
2 Mapoly0070s0021 [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN6.320.7808
3 Mapoly0108s0056 -14.700.7301
4 Mapoly0132s0041 [K05752] chromosome 3 open reading frame 1015.360.6712
5 Mapoly0007s0151 [PF05768] Glutaredoxin-like domain (DUF836)15.720.7126
6 Mapoly0044s0034 [PF01259] SAICAR synthetase; [KOG2835] Phosphoribosylamidoimidazole-succinocarboxamide synthase; [K01923] phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]; [6.3.2.6] Phosphoribosylaminoimidazolesuccinocarboxamide synthase.; [PTHR11609] PURINE BIOSYNTHESIS PROTEIN 6/7, PUR6/7; [PTHR11609:SF1] PURINE BIOSYNTHESIS PROTEIN 7, PUR717.090.7530
7 Mapoly0034s0065 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED18.170.6941
8 Mapoly0091s0003 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [GO:0030071] regulation of mitotic metaphase/anaphase transition; [KOG1155] Anaphase-promoting complex (APC), Cdc23 subunit; [PF13181] Tetratricopeptide repeat; [PF04049] Anaphase promoting complex subunit 8 / Cdc23; [GO:0005680] anaphase-promoting complex; [PF00515] Tetratricopeptide repeat; [K03355] anaphase-promoting complex subunit 8; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF10] CELL DIVISION CYCLE 2318.170.7519
9 Mapoly0094s0071 [GO:0016020] membrane; [KOG1563] Mitochondrial protein Surfeit 1/SURF1/SHY1, required for expression of cytochrome oxidase; [PTHR23427:SF2] SURFEIT LOCUS PROTEIN 1; [PTHR23427] SURFEIT LOCUS PROTEIN; [PF02104] SURF1 family20.930.7512
10 Mapoly0008s0196 [KOG2505] Ankyrin repeat protein; [GO:0005515] protein binding; [PTHR16036:SF2] SUBFAMILY NOT NAMED; [PF13606] Ankyrin repeat; [PTHR16036] FAMILY NOT NAMED21.280.7746
11 Mapoly0015s0049 [PF09353] Domain of unknown function (DUF1995)22.000.7344
12 Mapoly0015s0143 [PF12204] Domain of unknown function (DUF3598)23.960.7493
13 Mapoly0046s0081 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding24.000.7418
14 Mapoly0072s0110 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [GO:0016491] oxidoreductase activity; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES24.980.6756
15 Mapoly0114s0040 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family31.300.7121
16 Mapoly0049s0044 [PTHR18838:SF16] UNCHARACTERIZED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase; [PTHR18838] RHODANESE-LIKE DOMAIN-CONTAINING32.560.7406
17 Mapoly0013s0064 [KOG1401] Acetylornithine aminotransferase; [PTHR11986] AMINOTRANSFERASE CLASS III; [GO:0030170] pyridoxal phosphate binding; [PTHR11986:SF23] ALANINE-GLYOXYLATE AMINOTRANSFERASE 2; [2.6.1.11] Acetylornithine transaminase.; [GO:0008483] transaminase activity; [PF00202] Aminotransferase class-III; [K00818] acetylornithine aminotransferase [EC:2.6.1.11]34.390.7257
18 Mapoly0008s0207 [GO:0009607] response to biotic stimulus; [PF00407] Pathogenesis-related protein Bet v I family; [GO:0006952] defense response34.640.6193
19 Mapoly0006s0155 [GO:0003723] RNA binding; [PTHR11078] N UTILIZATION SUBSTANCE PROTEIN B-RELATED; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [GO:0006353] DNA-dependent transcription, termination35.720.7082
20 Mapoly0007s0246 [PTHR14911] FAMILY NOT NAMED; [PF01170] Putative RNA methylase family UPF002036.500.7128
21 Mapoly0143s0034 [PTHR20922] UNCHARACTERIZED; [GO:0008270] zinc ion binding; [PTHR20922:SF13] UNCHARACTERIZED; [PF05180] DNL zinc finger37.740.7419
22 Mapoly0007s0273 [PTHR30239:SF0] ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT; [2.2.1.6] Acetolactate synthase.; [PTHR30239] ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT; [K01653] acetolactate synthase I/III small subunit [EC:2.2.1.6]; [PF13710] ACT domain; [KOG2663] Acetolactate synthase, small subunit; [PF10369] Small subunit of acetolactate synthase37.790.7195
23 Mapoly0085s0068 [PF01936] NYN domain40.120.6888
24 Mapoly0066s0044 [GO:0016020] membrane; [PTHR13046:SF0] SUBFAMILY NOT NAMED; [KOG4130] Prenyl protein protease; [PTHR13046] PROTEASE U48 CAAX PRENYL PROTEASE RCE1; [3.4.22.-] Cysteine endopeptidases.; [PF02517] CAAX protease self-immunity; [K08658] prenyl protein peptidase [EC:3.4.22.-]42.710.6590
25 Mapoly0081s0053 [PF04452] RNA methyltransferase; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR30027] RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E; [K09761] ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]; [GO:0006364] rRNA processing44.540.6956
26 Mapoly0037s0029 -45.380.7010
27 Mapoly0082s0028 [K00620] glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]; [GO:0006526] arginine biosynthetic process; [2.3.1.1] Amino-acid N-acetyltransferase.; [PTHR23100:SF0] SUBFAMILY NOT NAMED; [GO:0004358] glutamate N-acetyltransferase activity; [PTHR23100] ARGININE BIOSYNTHESIS BIFUNCTIONAL PROTEIN ARGJ; [PF01960] ArgJ family; [2.3.1.35] Glutamate N-acetyltransferase.; [KOG2786] Putative glutamate/ornithine acetyltransferase49.750.7060
28 Mapoly0014s0054 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family51.380.6774
29 Mapoly0035s0097 [KOG0295] WD40 repeat-containing protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat51.530.5712
30 Mapoly0047s0093 [PTHR11079] CYTOSINE DEAMINASE; [GO:0016787] hydrolase activity; [PF00383] Cytidine and deoxycytidylate deaminase zinc-binding region; [GO:0008270] zinc ion binding; [KOG1018] Cytosine deaminase FCY1 and related enzymes52.150.7133
31 Mapoly0122s0052 [PF00011] Hsp20/alpha crystallin family52.390.7173
32 Mapoly0012s0025 [PF01453] D-mannose binding lectin53.390.6871
33 Mapoly0027s0012 [PTHR12049] UNCHARACTERIZED; [PF02636] Putative S-adenosyl-L-methionine-dependent methyltransferase; [PTHR12049:SF5] SUBFAMILY NOT NAMED; [KOG2901] Uncharacterized conserved protein56.000.7171
34 Mapoly0028s0125 [PF07719] Tetratricopeptide repeat; [PTHR12197:SF13] SET AND MYND DOMAIN CONTAINING; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00856] SET domain; [PTHR12197] SET AND MYND DOMAIN CONTAINING56.330.6123
35 Mapoly0035s0101 [PTHR31833] FAMILY NOT NAMED57.710.6878
36 Mapoly0159s0002 -61.940.7016
37 Mapoly0059s0019 -64.340.6881
38 Mapoly0002s0153 [K01696] tryptophan synthase beta chain [EC:4.2.1.20]; [4.2.1.20] Tryptophan synthase.; [PF00291] Pyridoxal-phosphate dependent enzyme; [KOG1395] Tryptophan synthase beta chain; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE66.330.6375
39 Mapoly0065s0015 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF02272] DHHA1 domain; [PTHR11777] ALANYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [PF01411] tRNA synthetases class II (A); [KOG0188] Alanyl-tRNA synthetase; [GO:0003676] nucleic acid binding; [K01872] alanyl-tRNA synthetase [EC:6.1.1.7]; [GO:0006419] alanyl-tRNA aminoacylation; [6.1.1.7] Alanine--tRNA ligase.; [GO:0004813] alanine-tRNA ligase activity67.530.6970
40 Mapoly0053s0020 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [KOG2145] Cytoplasmic tryptophanyl-tRNA synthetase; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [PTHR10055:SF1] TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0006436] tryptophanyl-tRNA aminoacylation; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity69.970.6911
41 Mapoly0009s0023 [PF04483] Protein of unknown function (DUF565)72.290.6647
42 Mapoly0029s0063 [PTHR20982:SF7] RIBOSOME RECYCLING FACTOR; [PTHR20982] RIBOSOME RECYCLING FACTOR; [KOG4759] Ribosome recycling factor; [PF01765] Ribosome recycling factor; [K02838] ribosome recycling factor; [GO:0006412] translation72.830.6435
43 Mapoly0027s0128 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [PTHR10302:SF0] SINGLE-STRANDED DNA-BINDING PROTEIN; [PF00436] Single-strand binding protein family73.200.6729
44 Mapoly0093s0042 [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [KOG2683] Sirtuin 4 and related class II sirtuins (SIR2 family)74.300.6516
45 Mapoly0066s0092 [K03127] transcription initiation factor TFIID subunit 13; [KOG3901] Transcription initiation factor IID subunit; [PF02269] Transcription initiation factor IID, 18kD subunit; [GO:0006366] transcription from RNA polymerase II promoter; [PTHR11380] TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED74.700.6705
46 Mapoly0044s0128 [K01687] dihydroxy-acid dehydratase [EC:4.2.1.9]; [PF00920] Dehydratase family; [KOG2448] Dihydroxy-acid dehydratase; [GO:0008152] metabolic process; [PTHR21000] DIHYDROXY-ACID DEHYDRATASE (DAD); [GO:0003824] catalytic activity; [4.2.1.9] Dihydroxy-acid dehydratase.76.540.7093
47 Mapoly0002s0141 -77.330.6779
48 Mapoly0066s0058 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0330] ATP-dependent RNA helicase77.970.6856
49 Mapoly0007s0165 -78.000.6339
50 Mapoly0050s0070 [GO:0016020] membrane; [PF01758] Sodium Bile acid symporter family; [GO:0008508] bile acid:sodium symporter activity; [GO:0006814] sodium ion transport; [K03453] bile acid:Na+ symporter, BASS family; [KOG2718] Na+-bile acid cotransporter; [PTHR10361] SODIUM-BILE ACID COTRANSPORTER78.490.6799
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