Guide Gene
- Gene ID
- Mapoly0100s0047
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG3263] Nucleic acid binding protein; [PTHR22849] WDSAM1 PROTEIN; [GO:0016567] protein ubiquitination; [GO:0004842] ubiquitin-protein ligase activity; [PF04564] U-box domain
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0100s0047 [KOG3263] Nucleic acid binding protein; [PTHR22849] WDSAM1 PROTEIN; [GO:0016567] protein ubiquitination; [GO:0004842] ubiquitin-protein ligase activity; [PF04564] U-box domain 0.00 1.0000 1 Mapoly0170s0008 [K06111] exocyst complex component 4; [GO:0006904] vesicle docking involved in exocytosis; [PF04048] Sec8 exocyst complex component specific domain; [GO:0000145] exocyst; [PTHR14146] EXOCYST COMPLEX COMPONENT 4; [GO:0015031] protein transport 9.49 0.7011 2 Mapoly0008s0250 [PTHR24007] BRCA1-ASSOCIATED PROTEIN; [PF00917] MATH domain; [GO:0005515] protein binding; [GO:0006281] DNA repair; [PF14631] Fanconi anaemia protein FancD2 nuclease; [KOG1987] Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains 10.82 0.7141 3 Mapoly0058s0047 [PF00091] Tubulin/FtsZ family, GTPase domain; [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat 14.07 0.6611 4 Mapoly0011s0201 [GO:0031625] ubiquitin protein ligase binding; [GO:0031461] cullin-RING ubiquitin ligase complex; [KOG2166] Cullins; [GO:0006511] ubiquitin-dependent protein catabolic process; [PF10557] Cullin protein neddylation domain; [K03869] cullin 3; [PTHR11932] CULLIN; [PF00888] Cullin family 25.65 0.6690 5 Mapoly0047s0119 [KOG0891] DNA-dependent protein kinase; [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [PF08771] Rapamycin binding domain; [K07203] FKBP12-rapamycin complex-associated protein; [GO:0005515] protein binding; [GO:0008144] drug binding; [PF11865] Domain of unknown function (DUF3385); [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED 27.35 0.6972 6 Mapoly0064s0056 [GO:0003677] DNA binding; [PF00628] PHD-finger; [GO:0005515] protein binding; [PF01429] Methyl-CpG binding domain; [GO:0005634] nucleus; [PF15612] WSTF, HB1, Itc1p, MBD9 motif 1; [PTHR14140] E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 29.65 0.7006 7 Mapoly0162s0013 [PF00929] Exonuclease; [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [PF05188] MutS domain II; [PTHR11361:SF34] DNA MISMATCH REPAIR PROTEIN MUTS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [KOG0218] Mismatch repair MSH3; [PF01624] MutS domain I; [PF05192] MutS domain III; [PF05190] MutS family domain IV 33.39 0.6959 8 Mapoly0004s0170 [PF04357] Family of unknown function (DUF490) 34.91 0.6579 9 Mapoly0038s0024 [PTHR19878] AUTOPHAGY PROTEIN 16-LIKE 39.10 0.6767 10 Mapoly0111s0052 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [KOG1015] Transcription regulator XNP/ATRX, DEAD-box superfamily; [K11681] helicase SWR1 [EC:3.6.4.12]; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [PF07529] HSA; [PF13921] Myb-like DNA-binding domain 40.25 0.6940 11 Mapoly0090s0047 [PF07719] Tetratricopeptide repeat; [PF13371] Tetratricopeptide repeat; [PF13414] TPR repeat; [KOG4162] Predicted calmodulin-binding protein; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 43.24 0.6664 12 Mapoly0025s0106 [PF14635] Helix-hairpin-helix motif; [GO:0003677] DNA binding; [PTHR10145:SF6] TRANSCRIPTION ELONGATION FACTOR SPT6-RELATED; [PF14641] Helix-turn-helix DNA-binding domain of SPT6; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [GO:0005515] protein binding; [PF14633] SH2 domain; [PF14639] Holliday-junction resolvase-like of SPT6; [PF14878] Death-like domain of SPT6; [GO:0032784] regulation of DNA-dependent transcription, elongation; [PF14632] Acidic N-terminal SPT6; [K11292] transcription elongation factor SPT6; [KOG1856] Transcription elongation factor SPT6; [PTHR10145] TRANSCRIPTION ELONGATION FACTOR SPT6 47.77 0.6923 13 Mapoly0131s0010 [PTHR15921:SF3] SUBFAMILY NOT NAMED; [KOG2071] mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11; [PF04818] RNA polymerase II-binding domain.; [PTHR15921] PRE-MRNA CLEAVAGE COMPLEX II 48.66 0.6912 14 Mapoly0144s0002 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [KOG0151] Predicted splicing regulator, contains RRM, SWAP and RPR domains; [K12842] U2-associated protein SR140; [GO:0003676] nucleic acid binding; [PTHR23140] RNA PROCESSING PROTEIN LD23810P; [PF01805] Surp module; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50.47 0.6879 15 Mapoly0029s0052 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR12950] FAMILY NOT NAMED; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [PF06333] Mediator complex subunit 13 C-terminal 52.15 0.6795 16 Mapoly0035s0057 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [K08869] aarF domain-containing kinase 53.44 0.5971 17 Mapoly0011s0209 - 54.27 0.6662 18 Mapoly0058s0074 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [PTHR12526] GLYCOSYLTRANSFERASE 54.44 0.6424 19 Mapoly0013s0059 [GO:0005515] protein binding; [PF02213] GYF domain; [PTHR14445] GRB10 INTERACTING GYF PROTEIN 58.58 0.6729 20 Mapoly0059s0047 [PTHR23092] TOPOISOMERASE-RELATED PROTEIN; [PF01909] Nucleotidyltransferase domain; [GO:0016779] nucleotidyltransferase activity; [PTHR23092:SF15] SUBFAMILY NOT NAMED; [PF10539] Development and cell death domain 59.25 0.6566 21 Mapoly0125s0035 [PTHR23081] RNA POLYMERASE II CTD PHOSPHATASE; [PF00035] Double-stranded RNA binding motif; [PF03031] NLI interacting factor-like phosphatase; [GO:0005515] protein binding; [PTHR23081:SF1] RNA POLYMERASE II CTD PHOSPHATASE 60.00 0.6662 22 Mapoly0006s0149 [KOG4732] Uncharacterized conserved protein; [PTHR21483] FAMILY NOT NAMED; [PF08620] RPAP1-like, C-terminal; [PF08621] RPAP1-like, N-terminal 60.55 0.6028 23 Mapoly0008s0009 - 64.40 0.6220 24 Mapoly0020s0130 [PF06839] GRF zinc finger; [GO:0008270] zinc ion binding 66.21 0.6671 25 Mapoly0043s0034 [PTHR13233] MICROSPHERULE PROTEIN 1; [GO:0005515] protein binding; [PTHR13233:SF0] SUBFAMILY NOT NAMED; [PF13325] N-terminal region of micro-spherule protein; [PF00498] FHA domain 67.26 0.6708 26 Mapoly0012s0024 - 70.21 0.6534 27 Mapoly0072s0011 [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [KOG1077] Vesicle coat complex AP-2, alpha subunit; [PF02883] Adaptin C-terminal domain; [PF02296] Alpha adaptin AP2, C-terminal domain; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [PTHR22780:SF4] ADAPTER-RELATED PROTEIN COMPLEX 2 ALPHA 1 SUBUNIT (ALPHA-ADAPTIN A); [K11824] AP-2 complex subunit alpha 72.99 0.6442 28 Mapoly0044s0125 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [PF00628] PHD-finger; [GO:0005515] protein binding; [PF02791] DDT domain 73.28 0.6689 29 Mapoly0140s0044 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [PTHR24361:SF148] SERINE/THREONINE PROTEIN KINASE; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE 73.48 0.6640 30 Mapoly0064s0101 [K10571] de-etiolated-1; [PTHR13374] DET1 HOMOLOG (DE-ETIOLATED-1 HOMOLOG); [PF09737] De-etiolated protein 1 Det1; [KOG2558] Negative regulator of histones 74.56 0.5146 31 Mapoly0135s0025 [PF13513] HEAT-like repeat; [GO:0005515] protein binding; [PTHR23346] TRANSLATIONAL ACTIVATOR GCN1-RELATED; [PF02985] HEAT repeat; [PTHR23346:SF7] TRANSLATIONAL ACTIVATOR GCN1-RELATED; [PF12074] Domain of unknown function (DUF3554); [KOG1242] Protein containing adaptin N-terminal region; [PF13646] HEAT repeats 75.89 0.6530 32 Mapoly0074s0001 [PF03810] Importin-beta N-terminal domain; [PF08767] CRM1 C terminal; [KOG2020] Nuclear transport receptor CRM1/MSN5 (importin beta superfamily); [PTHR11223] EXPORTIN 1/5; [GO:0006886] intracellular protein transport; [PTHR11223:SF2] EXPORTIN 1 (CHROMOSOME REGION MAINTENANCE PROTEIN 1); [K14290] exportin-1; [GO:0008536] Ran GTPase binding; [PF08389] Exportin 1-like protein 75.91 0.6321 33 Mapoly0119s0035 - 77.92 0.6507 34 Mapoly0063s0006 [KOG2217] U4/U6.U5 snRNP associated protein; [K11984] U4/U6.U5 tri-snRNP-associated protein 1; [PTHR14152:SF5] SUBFAMILY NOT NAMED; [PTHR14152] SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES; [PF03343] SART-1 family 78.57 0.6638 35 Mapoly0099s0003 [GO:0000922] spindle pole; [PF04130] Spc97 / Spc98 family; [GO:0005815] microtubule organizing center; [GO:0000226] microtubule cytoskeleton organization; [PTHR19302] GAMMA TUBULIN COMPLEX PROTEIN 80.50 0.6555 36 Mapoly0024s0107 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [K03350] anaphase-promoting complex subunit 3; [KOG1126] DNA-binding cell division cycle control protein; [PF13181] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF11] CELL DIVISION CYCLE 27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 3 82.70 0.6540 37 Mapoly0107s0053 [GO:0008601] protein phosphatase type 2A regulator activity; [PTHR10257] SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B; [GO:0000159] protein phosphatase type 2A complex; [KOG2085] Serine/threonine protein phosphatase 2A, regulatory subunit; [GO:0007165] signal transduction; [K11584] protein phosphatase 2 (formerly 2A), regulatory subunit B'; [PF01603] Protein phosphatase 2A regulatory B subunit (B56 family) 83.35 0.6463 38 Mapoly0045s0076 - 84.84 0.6223 39 Mapoly0007s0100 [PTHR15828] CYTOKINE RECEPTOR-LIKE FACTOR 3 90.69 0.6568 40 Mapoly0042s0082 [GO:0005643] nuclear pore; [PF07926] TPR/MLP1/MLP2-like protein; [PTHR18898] NUCLEOPROTEIN TPR-RELATED; [K09291] nucleoprotein TPR; [KOG4674] Uncharacterized conserved coiled-coil protein; [GO:0006606] protein import into nucleus 94.23 0.6575 41 Mapoly0042s0035 [PF01433] Peptidase family M1; [GO:0008237] metallopeptidase activity; [3.4.11.2] Membrane alanyl aminopeptidase.; [GO:0008270] zinc ion binding; [PTHR11533] PROTEASE M1 ZINC METALLOPROTEASE; [KOG1046] Puromycin-sensitive aminopeptidase and related aminopeptidases; [K01256] aminopeptidase N [EC:3.4.11.2]; [GO:0006508] proteolysis; [PF11940] Domain of unknown function (DUF3458) 96.56 0.6191 42 Mapoly0102s0016 [GO:0055114] oxidation-reduction process; [PTHR11063] GLUTAMATE SEMIALDEHYDE DEHYDROGENASE; [KOG4165] Gamma-glutamyl phosphate reductase; [GO:0016491] oxidoreductase activity; [K12657] delta-1-pyrroline-5-carboxylate synthetase [EC:2.7.2.11 1.2.1.41]; [2.7.2.11] Glutamate 5-kinase.; [PF00696] Amino acid kinase family; [GO:0008152] metabolic process; [1.2.1.41] Glutamate-5-semialdehyde dehydrogenase.; [PF00171] Aldehyde dehydrogenase family 98.16 0.5819 43 Mapoly0124s0011 [KOG1825] Fry-like conserved proteins; [PF14225] Cell morphogenesis C-terminal; [PTHR12295] UNCHARACTERIZED; [PF14222] Cell morphogenesis N-terminal; [PF14228] Cell morphogenesis central region 99.77 0.6273 44 Mapoly0026s0077 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [GO:0005515] protein binding; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF08064] UME (NUC010) domain; [PF00454] Phosphatidylinositol 3- and 4-kinase; [K06640] ataxia telangiectasia and Rad3 related [EC:2.7.11.1]; [GO:0004674] protein serine/threonine kinase activity; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED; [KOG0890] Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination 101.33 0.6480 45 Mapoly0010s0177 [PF09247] TATA box-binding protein binding; [PTHR13900:SF0] SUBFAMILY NOT NAMED; [PF15288] Zinc knuckle; [GO:0005515] protein binding; [PF00439] Bromodomain; [K03125] transcription initiation factor TFIID subunit 1; [PF12157] Protein of unknown function (DUF3591); [PTHR13900] TRANSCRIPTION INITIATION FACTOR TFIID; [PF00240] Ubiquitin family; [KOG0008] Transcription initiation factor TFIID, subunit TAF1 104.36 0.6555 46 Mapoly0082s0083 [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [KOG1788] Uncharacterized conserved protein; [PF02138] Beige/BEACH domain; [PF13385] Concanavalin A-like lectin/glucanases superfamily; [PF14844] PH domain associated with Beige/BEACH; [PF00400] WD domain, G-beta repeat 107.55 0.6394 47 Mapoly0013s0180 [PF12329] TATA element modulatory factor 1 DNA binding; [PTHR13140] MYOSIN; [KOG4673] Transcription factor TMF, TATA element modulatory factor; [PF12325] TATA element modulatory factor 1 TATA binding 110.54 0.6309 48 Mapoly0142s0005 [PF14874] Flagellar-associated PapD-like; [PTHR23053:SF0] SUBFAMILY NOT NAMED; [PTHR23053] DLEC1 (DELETED IN LUNG AND ESOPHAGEAL CANCER 1) 111.36 0.5993 49 Mapoly0091s0014 [PTHR12596:SF1] GB DEF: T27C4.14 PROTEIN; [PTHR12596] EXPORTIN 4,7-RELATED; [KOG4541] Nuclear transport receptor exportin 4 (importin beta superfamily) 112.62 0.6407 50 Mapoly0014s0006 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0752] Mitochondrial solute carrier protein 112.96 0.5163