Guide Gene

Gene ID
Mapoly0092s0039
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0092s0039 [GO:0005524] ATP binding; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE 0.00 1.0000
1 Mapoly0051s0028 [GO:0003723] RNA binding; [PTHR23253] EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; [PF02854] MIF4G domain; [GO:0005515] protein binding; [PF02020] eIF4-gamma/eIF5/eIF2-epsilon; [KOG2992] Nucleolar GTPase/ATPase p130; [K03260] translation initiation factor eIF-4F; [PF02847] MA3 domain3.870.8687
2 Mapoly0121s0014 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR23329] TUFTELIN-INTERACTING PROTEIN 11-RELATED; [PF07842] GC-rich sequence DNA-binding factor-like protein; [KOG2184] Tuftelin-interacting protein TIP39, contains G-patch domain; [PF01585] G-patch domain; [PF12457] Tuftelin interacting protein N terminal; [GO:0005634] nucleus; [GO:0003676] nucleic acid binding; [PTHR23329:SF1] TUFTELIN INTERACTING PROTEIN 11; [K13103] tuftelin-interacting protein 113.870.8624
3 Mapoly0075s0033 -6.480.8687
4 Mapoly0026s0037 [KOG0733] Nuclear AAA ATPase (VCP subfamily); [GO:0005524] ATP binding; [PTHR23077:SF27] AAA FAMILY ATPASE-LIKE PROTEIN; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE8.000.7827
5 Mapoly0103s0072 [KOG1901] Uncharacterized high-glucose-regulated protein; [PTHR12357] YTH (YT521-B HOMOLOGY) DOMAIN-CONTAINING; [PF04146] YT521-B-like domain8.370.8285
6 Mapoly0080s0038 [PTHR14005:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [KOG2072] Translation initiation factor 3, subunit a (eIF-3a); [PF01399] PCI domain; [PTHR14005] EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT; [K03254] translation initiation factor eIF-3 subunit 10; [GO:0005852] eukaryotic translation initiation factor 3 complex11.000.8259
7 Mapoly0112s0026 [PF11987] Translation-initiation factor 2; [KOG1144] Translation initiation factor 5B (eIF-5B); [PF00009] Elongation factor Tu GTP binding domain; [GO:0003924] GTPase activity; [PF14578] Elongation factor Tu domain 4; [PTHR23115] TRANSLATION FACTOR; [K03243] translation initiation factor eIF-5B; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 211.400.8370
8 Mapoly0026s0069 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family14.140.7936
9 Mapoly0035s0121 [PF11935] Domain of unknown function (DUF3453); [K06100] symplekin; [KOG1895] mRNA cleavage and polyadenylation factor II complex, subunit PTA1; [PF12295] Symplekin tight junction protein C terminal; [PTHR15245] SYMPLEKIN-RELATED14.700.8430
10 Mapoly0025s0054 [PTHR12438] UBIQUITIN-LIKE PROTEASE PROTEIN 2; [KOG0778] Protease, Ulp1 family; [GO:0008234] cysteine-type peptidase activity; [GO:0006508] proteolysis; [PF02902] Ulp1 protease family, C-terminal catalytic domain15.490.8002
11 Mapoly0049s0043 [PTHR15682] FAMILY NOT NAMED; [PF10441] Urb2/Npa2 family16.250.8358
12 Mapoly0005s0127 -16.430.8186
13 Mapoly0043s0050 [PTHR23019:SF0] SUBFAMILY NOT NAMED; [K14314] nuclear pore complex protein Nup210; [PF02368] Bacterial Ig-like domain (group 2); [PTHR23019] NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED; [KOG1833] Nuclear pore complex, gp210 component17.320.8116
14 Mapoly0054s0075 [PTHR17695] UNCHARACTERIZED; [PTHR17695:SF11] SUBFAMILY NOT NAMED; [PF07539] Down-regulated in metastasis; [KOG1823] DRIM (Down-regulated in metastasis)-like proteins18.250.8295
15 Mapoly0016s0130 [PF14817] HAUS augmin-like complex subunit 5; [GO:0051225] spindle assembly18.970.8148
16 Mapoly0007s0204 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF01424] R3H domain; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [PF12796] Ankyrin repeats (3 copies)19.340.8033
17 Mapoly0053s0083 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [KOG0262] RNA polymerase I, large subunit; [PF05000] RNA polymerase Rpb1, domain 4; [GO:0008270] zinc ion binding; [GO:0005634] nucleus; [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [K02999] DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [2.7.7.6] DNA-directed RNA polymerase.; [PTHR19376:SF11] DNA-DIRECTED RNA POLYMERASE I LARGEST SUBUNIT20.320.8317
18 Mapoly0051s0017 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376:SF31] OS04G0572600 PROTEIN; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [GO:0008270] zinc ion binding; [K03018] DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]; [GO:0032549] ribonucleoside binding; [GO:0005634] nucleus; [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [2.7.7.6] DNA-directed RNA polymerase.; [KOG0261] RNA polymerase III, large subunit22.270.8314
19 Mapoly0042s0082 [GO:0005643] nuclear pore; [PF07926] TPR/MLP1/MLP2-like protein; [PTHR18898] NUCLEOPROTEIN TPR-RELATED; [K09291] nucleoprotein TPR; [KOG4674] Uncharacterized conserved coiled-coil protein; [GO:0006606] protein import into nucleus24.980.8194
20 Mapoly0119s0054 [GO:0008641] small protein activating enzyme activity; [GO:0005524] ATP binding; [PF09358] Ubiquitin-activating enzyme e1 C-terminal domain; [PF00899] ThiF family; [PF02134] Repeat in ubiquitin-activating (UBA) protein; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [PF10585] Ubiquitin-activating enzyme active site; [GO:0006464] cellular protein modification process; [PTHR10953:SF4] UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 1 (UBIQUITIN-ACTIVATING ENZYME E1)25.380.8096
21 Mapoly0170s0019 [PF07719] Tetratricopeptide repeat; [PTHR22767:SF3] PEPTIDE ALPHA-N-ACETYLTRANSFERASE-RELATED; [KOG2053] Mitochondrial inheritance and actin cytoskeleton organization protein; [PF09797] N-acetyltransferase B complex (NatB) non catalytic subunit; [PTHR22767] N-TERMINAL ACETLYTRANSFERASE-RELATED26.000.7931
22 Mapoly0075s0087 [PTHR31576] FAMILY NOT NAMED26.530.8173
23 Mapoly0035s0137 [GO:0005643] nuclear pore; [PTHR10350:SF6] NUCLEOPORIN 155; [PF03177] Non-repetitive/WGA-negative nucleoporin C-terminal; [K14312] nuclear pore complex protein Nup155; [KOG1900] Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170); [GO:0006913] nucleocytoplasmic transport; [PF08801] Nup133 N terminal like; [GO:0017056] structural constituent of nuclear pore; [PTHR10350] NUCLEAR PORE COMPLEX PROTEIN NUP15528.860.8159
24 Mapoly0011s0138 [PF12717] non-SMC mitotic condensation complex subunit 1; [K13141] integrator complex subunit 4; [PTHR20938] UNCHARACTERIZED; [PTHR20938:SF0] SUBFAMILY NOT NAMED29.800.8255
25 Mapoly0051s0008 [GO:0003723] RNA binding; [PTHR12537:SF12] PUMILIO 1, 2; [PF07990] Nucleic acid binding protein NABP; [PF00806] Pumilio-family RNA binding repeat; [PTHR12537] RNA BINDING PROTEIN PUMILIO-RELATED; [KOG1488] Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily)30.590.8122
26 Mapoly0015s0081 [PF11707] Ribosome 60S biogenesis N-terminal; [PTHR13500] NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 133.760.8141
27 Mapoly0148s0012 [PF02136] Nuclear transport factor 2 (NTF2) domain; [PTHR10693] RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0116] RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains; [GO:0006810] transport; [GO:0005622] intracellular33.990.7075
28 Mapoly0013s0152 [PTHR12436:SF4] LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER 8; [KOG1861] Leucine permease transcriptional regulator; [PTHR12436] 80 KDA MCM3-ASSOCIATED PROTEIN; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family36.280.8193
29 Mapoly0109s0022 [GO:0016020] membrane; [PTHR13302] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3; [GO:0005801] cis-Golgi network; [GO:0006886] intracellular protein transport; [KOG2604] Subunit of cis-Golgi transport vesicle tethering complex - Sec34p; [PF04136] Sec34-like family38.420.7476
30 Mapoly0011s0206 [GO:0005524] ATP binding; [PTHR24031:SF125] SUBFAMILY NOT NAMED; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0339] ATP-dependent RNA helicase; [K12835] ATP-dependent RNA helicase DDX42 [EC:3.6.4.13]; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding39.240.8138
31 Mapoly0156s0022 [PTHR11226] UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE; [GO:0006486] protein glycosylation; [PF06427] UDP-glucose:Glycoprotein Glucosyltransferase; [K11718] UDP-glucose:glycoprotein glucosyltransferase [EC:2.4.1.-]; [GO:0003980] UDP-glucose:glycoprotein glucosyltransferase activity; [PTHR11226:SF0] SUBFAMILY NOT NAMED; [KOG1879] UDP-glucose:glycoprotein glucosyltransferase; [2.4.1.-] Hexosyltransferases.41.640.7593
32 Mapoly0024s0131 -42.250.7933
33 Mapoly0125s0016 [GO:0005737] cytoplasm; [GO:0009058] biosynthetic process; [K01892] histidyl-tRNA synthetase [EC:6.1.1.21]; [GO:0016841] ammonia-lyase activity; [PF00221] Aromatic amino acid lyase; [PTHR11476:SF1] HISTIDYL-TRNA SYNTHETASE; [PF03129] Anticodon binding domain; [PTHR11476] HISTIDYL-TRNA SYNTHETASE; [PF13393] Histidyl-tRNA synthetase; [KOG1936] Histidyl-tRNA synthetase; [6.1.1.21] Histidine--tRNA ligase.43.710.8136
34 Mapoly0003s0124 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain; [KOG1801] tRNA-splicing endonuclease positive effector (SEN1)45.000.8107
35 Mapoly0121s0051 [KOG1003] Actin filament-coating protein tropomyosin46.000.8125
36 Mapoly0101s0062 [GO:0003677] DNA binding; [PTHR20856:SF7] DNA-DIRECTED RNA POLYMERASE II SUBUNIT 2; [KOG0214] RNA polymerase II, second largest subunit; [PF04567] RNA polymerase Rpb2, domain 5; [K03010] DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]; [PF04565] RNA polymerase Rpb2, domain 3; [PTHR20856] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [PF00562] RNA polymerase Rpb2, domain 6; [PF04566] RNA polymerase Rpb2, domain 4; [GO:0032549] ribonucleoside binding; [PF04561] RNA polymerase Rpb2, domain 2; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.; [PF04560] RNA polymerase Rpb2, domain 7; [PF04563] RNA polymerase beta subunit46.100.7472
37 Mapoly0096s0019 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family48.120.7190
38 Mapoly0029s0126 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PF09416] RNA helicase (UPF2 interacting domain); [GO:0004386] helicase activity; [GO:0005737] cytoplasm; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [KOG1802] RNA helicase nonsense mRNA reducing factor (pNORF1); [GO:0008270] zinc ion binding; [PF13086] AAA domain; [3.6.4.-] Acting on acid anhydrides; involved in cellular and subcellular movement.; [K14326] regulator of nonsense transcripts 1 [EC:3.6.4.-]; [GO:0000184] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; [PF13087] AAA domain48.910.8107
39 Mapoly0077s0055 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [K11665] DNA helicase INO80 [EC:3.6.4.12]; [PTHR10799:SF213] DNA HELICASE INO80-RELATED; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [PF13892] DNA-binding domain; [KOG0388] SNF2 family DNA-dependent ATPase48.970.8127
40 Mapoly0036s0119 [PF14500] Dos2-interacting transcription regulator of RNA-Pol-II; [PF12460] RNAPII transcription regulator C-terminal; [PTHR12891] DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS1950.910.8019
41 Mapoly0010s0175 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [K12735] peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]; [GO:0008270] zinc ion binding; [GO:0000413] protein peptidyl-prolyl isomerization; [PF00098] Zinc knuckle; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [GO:0003676] nucleic acid binding; [KOG0415] Predicted peptidyl prolyl cis-trans isomerase; [PTHR11071:SF156] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)51.210.8011
42 Mapoly0007s0016 -51.220.7291
43 Mapoly0029s0118 [KOG0959] N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily; [K01411] nardilysin [EC:3.4.24.61]; [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [3.4.24.61] Nardilysin.52.120.7023
44 Mapoly0177s0007 [GO:0016020] membrane; [3.6.1.1] Inorganic diphosphatase.; [PF03030] Inorganic H+ pyrophosphatase; [GO:0004427] inorganic diphosphatase activity; [PTHR31998:SF0] SUBFAMILY NOT NAMED; [K01507] inorganic pyrophosphatase [EC:3.6.1.1]; [GO:0015992] proton transport; [GO:0009678] hydrogen-translocating pyrophosphatase activity; [PTHR31998] FAMILY NOT NAMED53.120.7286
45 Mapoly0004s0129 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [PF12436] ICP0-binding domain of Ubiquitin-specific protease 7; [PF00917] MATH domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005515] protein binding; [KOG1863] Ubiquitin carboxyl-terminal hydrolase; [PF14533] Ubiquitin-specific protease C-terminal; [PTHR24619] FAMILY NOT NAMED; [K11838] ubiquitin carboxyl-terminal hydrolase 7 [EC:3.1.2.15]54.220.7941
46 Mapoly0102s0024 [GO:0006355] regulation of transcription, DNA-dependent; [PF14443] DBC1; [KOG3227] Calcium-responsive transcription coactivator; [PTHR14304] P30 DBC PROTEIN54.220.7984
47 Mapoly0028s0109 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [PTHR23069:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PF00439] Bromodomain; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0732] AAA+-type ATPase containing the bromodomain55.500.7976
48 Mapoly0032s0010 -57.590.8056
49 Mapoly0001s0041 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PF00271] Helicase conserved C-terminal domain; [GO:0005515] protein binding; [KOG0386] Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily); [PF00439] Bromodomain; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain58.250.8063
50 Mapoly0022s0121 -58.690.7991
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