Guide Gene

Gene ID
Mapoly0082s0015
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0008270] zinc ion binding; [PTHR13145] SSM4 PROTEIN; [PTHR13145:SF0] SUBFAMILY NOT NAMED; [6.3.2.19] Ubiquitin--protein ligase.; [K10661] E3 ubiquitin-protein ligase MARCH6 [EC:6.3.2.19]; [PF12906] RING-variant domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0082s0015 [GO:0008270] zinc ion binding; [PTHR13145] SSM4 PROTEIN; [PTHR13145:SF0] SUBFAMILY NOT NAMED; [6.3.2.19] Ubiquitin--protein ligase.; [K10661] E3 ubiquitin-protein ligase MARCH6 [EC:6.3.2.19]; [PF12906] RING-variant domain 0.00 1.0000
1 Mapoly0091s0020 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [GO:0006661] phosphatidylinositol biosynthetic process; [K00888] phosphatidylinositol 4-kinase [EC:2.7.1.67]; [GO:0046854] phosphatidylinositol phosphorylation; [KOG0903] Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion; [PTHR10048] PHOSPHATIDYLINOSITOL KINASE; [PF00454] Phosphatidylinositol 3- and 4-kinase; [GO:0004430] 1-phosphatidylinositol 4-kinase activity; [PTHR10048:SF22] PHOSPHATIDYLINOSITOL 4-KINASE BETA; [2.7.1.67] 1-phosphatidylinositol 4-kinase.; [GO:0048015] phosphatidylinositol-mediated signaling1.410.8387
2 Mapoly0151s0044 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF08263] Leucine rich repeat N-terminal domain; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420:SF237] SUBFAMILY NOT NAMED; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE7.940.7472
3 Mapoly0093s0032 [GO:0003677] DNA binding; [PF13891] Potential DNA-binding domain; [GO:0006355] regulation of transcription, DNA-dependent; [PF02362] B3 DNA binding domain; [PTHR31677] FAMILY NOT NAMED; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity9.950.7958
4 Mapoly0038s0067 [PF09333] ATG C terminal domain; [GO:0006914] autophagy; [PTHR13190] FAMILY NOT NAMED; [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter10.950.7563
5 Mapoly0030s0030 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE11.310.8059
6 Mapoly0139s0018 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies); [PF13920] Zinc finger, C3HC4 type (RING finger)12.370.7086
7 Mapoly0129s0046 [PTHR10218] GTP-BINDING PROTEIN ALPHA SUBUNIT; [GO:0031683] G-protein beta/gamma-subunit complex binding; [GO:0004871] signal transducer activity; [GO:0007186] G-protein coupled receptor signaling pathway; [KOG0082] G-protein alpha subunit (small G protein superfamily); [GO:0003924] GTPase activity; [GO:0019001] guanyl nucleotide binding; [PF00503] G-protein alpha subunit18.110.7930
8 Mapoly0034s0106 [PTHR15574] WD REPEAT DOMAIN-CONTAINING FAMILY; [GO:0005515] protein binding; [KOG1334] WD40 repeat protein; [PF00400] WD domain, G-beta repeat18.970.6960
9 Mapoly0031s0080 [GO:0016020] membrane; [PTHR12741] LYST-INTERACTING PROTEIN LIP5 (DOPAMINE RESPONSIVE PROTEIN DRG-1); [PF02364] 1,3-beta-glucan synthase component; [GO:0006075] (1-3)-beta-D-glucan biosynthetic process; [KOG0916] 1,3-beta-glucan synthase/callose synthase catalytic subunit; [GO:0000148] 1,3-beta-D-glucan synthase complex; [PF14288] 1,3-beta-glucan synthase subunit FKS1, domain-1; [K11000] callose synthase [EC:2.4.1.-]; [GO:0003843] 1,3-beta-D-glucan synthase activity; [2.4.1.-] Hexosyltransferases.; [PTHR12741:SF7] gb def: ENSANGP00000009396 (Fragment)20.780.7382
10 Mapoly0093s0025 -22.090.7695
11 Mapoly0011s0090 [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein22.580.7644
12 Mapoly0081s0024 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [KOG0389] SNF2 family DNA-dependent ATPase22.580.7905
13 Mapoly0036s0010 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [GO:0005515] protein binding; [KOG0940] Ubiquitin protein ligase RSP5/NEDD4; [6.3.2.19] Ubiquitin--protein ligase.; [K10591] E3 ubiquitin-protein ligase NEDD4 [EC:6.3.2.19]; [PF00240] Ubiquitin family; [GO:0004842] ubiquitin-protein ligase activity; [PF00632] HECT-domain (ubiquitin-transferase)23.020.7078
14 Mapoly0019s0134 [GO:0003677] DNA binding; [PTHR31251] FAMILY NOT NAMED; [GO:0005634] nucleus; [PF03110] SBP domain23.370.7758
15 Mapoly0140s0029 [GO:0016307] phosphatidylinositol phosphate kinase activity; [2.7.1.68] 1-phosphatidylinositol-4-phosphate 5-kinase.; [PF01504] Phosphatidylinositol-4-phosphate 5-Kinase; [KOG0229] Phosphatidylinositol-4-phosphate 5-kinase; [PTHR23086] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE; [K00889] 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]; [GO:0046488] phosphatidylinositol metabolic process; [PF02493] MORN repeat25.460.7525
16 Mapoly0065s0023 [GO:0016567] protein ubiquitination; [GO:0004842] ubiquitin-protein ligase activity; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING; [PF04564] U-box domain27.170.7859
17 Mapoly0085s0031 [KOG0431] Auxilin-like protein and related proteins containing DnaJ domain; [PF00226] DnaJ domain; [PTHR23172] AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED27.350.7453
18 Mapoly0115s0048 [PTHR31314] FAMILY NOT NAMED; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PF14379] MYB-CC type transfactor, LHEQLE motif30.820.7360
19 Mapoly0105s0039 [PF06101] Plant protein of unknown function (DUF946); [PF06650] Protein of unknown function (DUF1162); [PF06398] Integral peroxisomal membrane peroxin; [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter; [PTHR16166:SF61] PUTATIVE UNCHARACTERIZED PROTEIN31.020.7185
20 Mapoly0046s0076 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity32.030.7491
21 Mapoly0092s0028 [GO:0005515] protein binding; [PF00612] IQ calmodulin-binding motif; [PTHR25069] FAMILY NOT NAMED32.450.7577
22 Mapoly0068s0020 [GO:0005515] protein binding; [PTHR22874:SF1] SUBFAMILY NOT NAMED; [PTHR22874] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat35.410.6308
23 Mapoly0021s0055 [PF00249] Myb-like DNA-binding domain; [GO:0005515] protein binding; [PF00569] Zinc finger, ZZ type; [GO:0003682] chromatin binding; [GO:0008270] zinc ion binding; [PF04433] SWIRM domain; [KOG1279] Chromatin remodeling factor subunit and related transcription factors; [PTHR12802] SWI/SNF COMPLEX-RELATED; [K11649] SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C36.860.7654
24 Mapoly0133s0047 [PTHR23213] FORMIN-RELATED; [PF02181] Formin Homology 2 Domain37.460.7435
25 Mapoly0074s0081 [GO:0003677] DNA binding; [PF03859] CG-1 domain; [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [GO:0005634] nucleus; [PTHR23335] CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR (CAMTA); [PF00612] IQ calmodulin-binding motif; [PF01833] IPT/TIG domain; [KOG0520] Uncharacterized conserved protein, contains IPT/TIG domain37.520.7559
26 Mapoly0008s0253 [KOG4271] Rho-GTPase activating protein; [GO:0007165] signal transduction; [PF00620] RhoGAP domain; [PF00169] PH domain; [PTHR23176] RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN; [PF14389] Leucine-zipper of ternary complex factor MIP141.640.7531
27 Mapoly0020s0113 [GO:0000287] magnesium ion binding; [PTHR24092] FAMILY NOT NAMED; [GO:0005524] ATP binding; [PF12710] haloacid dehalogenase-like hydrolase; [KOG0206] P-type ATPase; [3.6.3.1] Phospholipid-translocating ATPase.; [GO:0000166] nucleotide binding; [GO:0015914] phospholipid transport; [GO:0016021] integral to membrane; [K01530] phospholipid-translocating ATPase [EC:3.6.3.1]; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [GO:0004012] phospholipid-translocating ATPase activity42.710.7599
28 Mapoly0006s0008 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE42.720.6959
29 Mapoly0068s0065 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family45.000.6567
30 Mapoly0008s0142 [PF13854] Kelch motif; [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN45.170.7172
31 Mapoly0007s0175 [PTHR14296] FAMILY NOT NAMED; [PTHR14296:SF3] SUBFAMILY NOT NAMED; [PF02791] DDT domain46.990.7291
32 Mapoly0008s0008 [K14409] protein SMG7; [PTHR15696] SMG-7 (SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7); [PF10373] Est1 DNA/RNA binding domain; [PF10374] Telomerase activating protein Est1; [PTHR15696:SF0] SUBFAMILY NOT NAMED47.600.7637
33 Mapoly0114s0023 [PTHR16122] MCTP-RELATED; [PF00168] C2 domain; [PF02893] GRAM domain; [GO:0005515] protein binding; [KOG1032] Uncharacterized conserved protein, contains GRAM domain51.500.7344
34 Mapoly0043s0055 [PTHR31115] FAMILY NOT NAMED; [PF10198] Histone acetyltransferases subunit 351.980.7565
35 Mapoly0061s0066 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF08381] Transcription factor regulating root and shoot growth via Pin352.520.6345
36 Mapoly0009s0158 -53.240.7239
37 Mapoly0087s0049 -54.080.6979
38 Mapoly0176s0005 [PF05678] VQ motif55.890.7142
39 Mapoly0002s0299 [K11796] Trpc4-associated protein; [PTHR31743] FAMILY NOT NAMED; [PF12463] Protein of unknown function (DUF3689)56.920.7135
40 Mapoly0002s0158 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [KOG1240] Protein kinase containing WD40 repeats; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PF02985] HEAT repeat; [PTHR17583] PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4; [K08333] phosphoinositide-3-kinase, regulatory subunit 4, p150 [EC:2.7.11.1]; [PF00400] WD domain, G-beta repeat56.990.6720
41 Mapoly0045s0030 [PF05964] F/Y-rich N-terminus; [PF02373] JmjC domain, hydroxylase; [GO:0005634] nucleus; [PF02375] jmjN domain; [PF05965] F/Y rich C-terminus; [PTHR10694] JUMONJI DOMAIN CONTAINING PROTEIN; [PF02928] C5HC2 zinc finger57.620.7483
42 Mapoly0019s0030 -57.630.7341
43 Mapoly0115s0057 -57.970.7114
44 Mapoly0005s0106 [PTHR21450:SF9] UNCHARACTERIZED; [PF04783] Protein of unknown function (DUF630); [PF04782] Protein of unknown function (DUF632); [PTHR21450] UNCHARACTERIZED58.740.6970
45 Mapoly0005s0200 [KOG1898] Splicing factor 3b, subunit 3; [PF10433] Mono-functional DNA-alkylating methyl methanesulfonate N-term; [PF03178] CPSF A subunit region; [GO:0005634] nucleus; [PTHR10644] DNA REPAIR/RNA PROCESSING CPSF FAMILY; [GO:0003676] nucleic acid binding; [PTHR10644:SF4] SUBFAMILY NOT NAMED63.000.6494
46 Mapoly0003s0272 [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [PF12812] PDZ-like domain; [PF13365] Trypsin-like peptidase domain63.070.7271
47 Mapoly0041s0092 [GO:0016020] membrane; [3.6.1.1] Inorganic diphosphatase.; [PF03030] Inorganic H+ pyrophosphatase; [GO:0004427] inorganic diphosphatase activity; [K01507] inorganic pyrophosphatase [EC:3.6.1.1]; [GO:0015992] proton transport; [GO:0009678] hydrogen-translocating pyrophosphatase activity; [PTHR31998] FAMILY NOT NAMED63.620.6297
48 Mapoly0071s0122 [GO:0008234] cysteine-type peptidase activity; [PTHR12606] SENTRIN/SUMO-SPECIFIC PROTEASE; [K08592] sentrin-specific protease 1 [EC:3.4.22.-]; [KOG3246] Sentrin-specific cysteine protease (Ulp1 family); [3.4.22.-] Cysteine endopeptidases.; [GO:0006508] proteolysis; [PF02902] Ulp1 protease family, C-terminal catalytic domain67.190.7143
49 Mapoly0008s0077 [PTHR31513] FAMILY NOT NAMED69.410.7282
50 Mapoly0072s0049 [GO:0030259] lipid glycosylation; [GO:0016758] transferase activity, transferring hexosyl groups; [PF03033] Glycosyltransferase family 28 N-terminal domain; [GO:0005975] carbohydrate metabolic process; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [2.4.1.173] Sterol 3-beta-glucosyltransferase.; [K05841] sterol 3beta-glucosyltransferase [EC:2.4.1.173]; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase71.830.7311
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