Guide Gene

Gene ID
Mapoly0074s0013
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0018344] protein geranylgeranylation; [K05956] geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]; [KOG0366] Protein geranylgeranyltransferase type II, beta subunit; [PF13249] Prenyltransferase-like; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [2.5.1.60] Protein geranylgeranyltransferase type II.; [GO:0004663] Rab geranylgeranyltransferase activity

Coexpressed Gene Network

Gene ID Description Information
Mapoly0002s0332 [KOG2367] Alpha-isopropylmalate synthase/homocitrate synthase; [PF00682] HMGL-like; [2.3.3.13] 2-isopropylmalate synthase.; [GO:0003852] 2-isopropylmalate synthase activity; [K01649] 2-isopropylmalate synthase [EC:2.3.3.13]; [GO:0009098] leucine biosynthetic process; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [PTHR10277:SF9] 2-ISOPROPYLMALATE SYNTHASE; [PF08502] LeuA allosteric (dimerisation) domain; [GO:0003824] catalytic activity
Mapoly0007s0157 [4.2.2.2] Pectate lyase.; [K01728] pectate lyase [EC:4.2.2.2]; [PF00544] Pectate lyase; [PTHR31683] FAMILY NOT NAMED
Mapoly0014s0147 [PTHR10072] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN
Mapoly0015s0144 -
Mapoly0016s0169 -
Mapoly0020s0117 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG1947] Leucine rich repeat proteins, some proteins contain F-box
Mapoly0021s0032 -
Mapoly0023s0020 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]; [PTHR10291:SF0] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE
Mapoly0031s0113 [PTHR20854] INOSITOL MONOPHOSPHATASE; [GO:0046854] phosphatidylinositol phosphorylation; [3.1.3.7] 3'(2'),5'-bisphosphate nucleotidase.; [KOG1528] Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1; [PF00459] Inositol monophosphatase family; [K01082] 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
Mapoly0034s0109 [GO:0006396] RNA processing; [KOG3833] Uncharacterized conserved protein, contains RtcB domain; [PTHR11118] UNCHARACTERIZED; [PF01139] tRNA-splicing ligase RtcB; [GO:0008452] RNA ligase activity
Mapoly0045s0149 [PTHR22960:SF0] SUBFAMILY NOT NAMED; [KOG2876] Molybdenum cofactor biosynthesis pathway protein; [PF13353] 4Fe-4S single cluster domain; [GO:0006777] Mo-molybdopterin cofactor biosynthetic process; [PF04055] Radical SAM superfamily; [GO:0051539] 4 iron, 4 sulfur cluster binding; [PTHR22960] MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [GO:0019008] molybdopterin synthase complex; [PF06463] Molybdenum Cofactor Synthesis C; [K03639] molybdenum cofactor biosynthesis protein
Mapoly0058s0055 [PF06244] Protein of unknown function (DUF1014); [PTHR21680:SF0] SUBFAMILY NOT NAMED; [KOG3223] Uncharacterized conserved protein; [PTHR21680] UNCHARACTERIZED
Mapoly0061s0105 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN
Mapoly0067s0022 [PTHR12746] NONSENSE-MEDIATED MRNA DECAY PROTEIN 3; [KOG2613] NMD protein affecting ribosome stability and mRNA decay; [PTHR12746:SF2] gb def: Hypothetical protein; [K07562] nonsense-mediated mRNA decay protein 3; [PF04981] NMD3 family
Mapoly0071s0110 [GO:0042393] histone binding; [PF02182] SAD/SRA domain; [PTHR14140] E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED
Mapoly0074s0013 [GO:0018344] protein geranylgeranylation; [K05956] geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]; [KOG0366] Protein geranylgeranyltransferase type II, beta subunit; [PF13249] Prenyltransferase-like; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [2.5.1.60] Protein geranylgeranyltransferase type II.; [GO:0004663] Rab geranylgeranyltransferase activity
Mapoly0079s0003 [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [PTHR11863:SF3] SUR2 HYDROXYLASE/DESATURASE; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [PTHR11863] STEROL DESATURASE; [KOG0874] Sphingolipid hydroxylase
Mapoly0081s0061 [KOG0454] 3-isopropylmalate dehydratase (aconitase superfamily); [4.2.1.35] (R)-2-methylmalate dehydratase.; [4.2.1.33] 3-isopropylmalate dehydratase.; [K01703] 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]; [GO:0008152] metabolic process; [PTHR11670] ACONITASE; [PF00330] Aconitase family (aconitate hydratase)
Mapoly0085s0088 [PF03656] Pam16; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [PTHR12388] MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE; [KOG3442] Uncharacterized conserved protein; [GO:0030150] protein import into mitochondrial matrix
Mapoly0128s0016 [PTHR31715] FAMILY NOT NAMED; [K03189] urease accessory protein; [PF02492] CobW/HypB/UreG, nucleotide-binding domain
Mapoly0138s0041 [PTHR30602] AMINO-ACID ACETYLTRANSFERASE; [2.3.1.1] Amino-acid N-acetyltransferase.; [K14682] amino-acid N-acetyltransferase [EC:2.3.1.1]; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PF00696] Amino acid kinase family; [KOG2436] Acetylglutamate kinase/acetylglutamate synthase