Guide Gene
- Gene ID
- Mapoly0060s0064
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0010468] regulation of gene expression; [GO:0005777] peroxisome; [PTHR14379] LIMKAIN B (LKAP); [PF01936] NYN domain; [PF12872] OST-HTH/LOTUS domain
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0060s0064 [GO:0010468] regulation of gene expression; [GO:0005777] peroxisome; [PTHR14379] LIMKAIN B (LKAP); [PF01936] NYN domain; [PF12872] OST-HTH/LOTUS domain 0.00 1.0000 1 Mapoly0140s0005 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [KOG0942] E3 ubiquitin protein ligase; [6.3.2.19] Ubiquitin--protein ligase.; [K10589] ubiquitin-protein ligase E3 C [EC:6.3.2.19]; [GO:0004842] ubiquitin-protein ligase activity; [PF00632] HECT-domain (ubiquitin-transferase) 3.00 0.7765 2 Mapoly0054s0071 - 5.83 0.7816 3 Mapoly0016s0106 - 7.35 0.7184 4 Mapoly0107s0042 [PTHR23196:SF1] PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN; [PF00533] BRCA1 C Terminus (BRCT) domain; [PTHR23196] PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 11.14 0.7789 5 Mapoly0011s0090 [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein 15.49 0.7657 6 Mapoly0092s0028 [GO:0005515] protein binding; [PF00612] IQ calmodulin-binding motif; [PTHR25069] FAMILY NOT NAMED 16.85 0.7659 7 Mapoly0039s0032 [PTHR22999] PX SERINE/THREONINE KINASE (PXK); [PF00787] PX domain; [PF02194] PXA domain; [KOG2101] Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s); [GO:0035091] phosphatidylinositol binding; [PF08628] Sorting nexin C terminal 17.89 0.7252 8 Mapoly0140s0029 [GO:0016307] phosphatidylinositol phosphate kinase activity; [2.7.1.68] 1-phosphatidylinositol-4-phosphate 5-kinase.; [PF01504] Phosphatidylinositol-4-phosphate 5-Kinase; [KOG0229] Phosphatidylinositol-4-phosphate 5-kinase; [PTHR23086] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE; [K00889] 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]; [GO:0046488] phosphatidylinositol metabolic process; [PF02493] MORN repeat 20.35 0.7443 9 Mapoly0088s0014 [PF00628] PHD-finger; [GO:0005515] protein binding 25.10 0.7533 10 Mapoly0047s0138 [K12169] Kip1 ubiquitination-promoting complex protein 1 [EC:6.3.2.19]; [KOG4692] Predicted E3 ubiquitin ligase; [GO:0005515] protein binding; [6.3.2.19] Ubiquitin--protein ligase.; [PF00622] SPRY domain; [PTHR13363:SF1] SUBFAMILY NOT NAMED; [PTHR13363] RING FINGER AND SRY DOMAIN-CONTAINING 31.08 0.7321 11 Mapoly0061s0049 - 33.59 0.7446 12 Mapoly0001s0074 [KOG1021] Acetylglucosaminyltransferase EXT1/exostosin 1; [PF03016] Exostosin family; [PTHR11062] EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED 35.50 0.6310 13 Mapoly0008s0008 [K14409] protein SMG7; [PTHR15696] SMG-7 (SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7); [PF10373] Est1 DNA/RNA binding domain; [PF10374] Telomerase activating protein Est1; [PTHR15696:SF0] SUBFAMILY NOT NAMED 35.75 0.7608 14 Mapoly0038s0067 [PF09333] ATG C terminal domain; [GO:0006914] autophagy; [PTHR13190] FAMILY NOT NAMED; [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter 37.79 0.6966 15 Mapoly0008s0077 [PTHR31513] FAMILY NOT NAMED 41.74 0.7329 16 Mapoly0192s0005 [KOG1082] Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [GO:0005515] protein binding; [PF00856] SET domain; [GO:0008270] zinc ion binding; [PTHR22884] SET DOMAIN PROTEINS; [PF07496] CW-type Zinc Finger 42.54 0.7437 17 Mapoly0093s0032 [GO:0003677] DNA binding; [PF13891] Potential DNA-binding domain; [GO:0006355] regulation of transcription, DNA-dependent; [PF02362] B3 DNA binding domain; [PTHR31677] FAMILY NOT NAMED; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity 43.63 0.7241 18 Mapoly0002s0011 [K13145] integrator complex subunit 8; [PTHR13350] UNCHARACTERIZED 43.87 0.7433 19 Mapoly0038s0034 [GO:0016020] membrane; [K12385] Niemann-Pick C1 protein; [GO:0008158] hedgehog receptor activity; [KOG1933] Cholesterol transport protein (Niemann-Pick C disease protein); [PTHR10796] PATCHED-RELATED; [PF02460] Patched family; [PF12349] Sterol-sensing domain of SREBP cleavage-activation; [PTHR10796:SF35] NIEMANN-PICK C1 47.14 0.6078 20 Mapoly0090s0049 [PF13831] PHD-finger; [PF00628] PHD-finger; [GO:0005515] protein binding; [PF13832] PHD-zinc-finger like domain; [PF00856] SET domain; [KOG1080] Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; [PTHR13793] PHD FINGER PROTEINS; [PF00855] PWWP domain; [PTHR13793:SF5] TRITHORAX 48.34 0.7164 21 Mapoly0034s0106 [PTHR15574] WD REPEAT DOMAIN-CONTAINING FAMILY; [GO:0005515] protein binding; [KOG1334] WD40 repeat protein; [PF00400] WD domain, G-beta repeat 55.24 0.6413 22 Mapoly0091s0046 [PF05641] Agenet domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR24098] FAMILY NOT NAMED 57.03 0.7348 23 Mapoly0027s0156 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity 57.16 0.6976 24 Mapoly0029s0138 [PF00637] Region in Clathrin and VPS; [GO:0016192] vesicle-mediated transport; [PTHR12894:SF10] VAM6/VPS39 RELATED; [KOG2063] Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3; [PF10367] Vacuolar sorting protein 39 domain 2; [GO:0006886] intracellular protein transport; [PF00780] CNH domain; [GO:0005083] small GTPase regulator activity; [PTHR12894] CNH DOMAIN CONTAINING; [PF10366] Vacuolar sorting protein 39 domain 1 58.40 0.7007 25 Mapoly0023s0039 [PF00676] Dehydrogenase E1 component; [GO:0055114] oxidation-reduction process; [GO:0006099] tricarboxylic acid cycle; [1.2.4.2] Oxoglutarate dehydrogenase (succinyl-transferring).; [GO:0030976] thiamine pyrophosphate binding; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [K00164] 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]; [GO:0004591] oxoglutarate dehydrogenase (succinyl-transferring) activity; [PTHR23152] 2-OXOGLUTARATE DEHYDROGENASE; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; [KOG0450] 2-oxoglutarate dehydrogenase, E1 subunit 59.87 0.7004 26 Mapoly0002s0198 [PF13831] PHD-finger; [GO:0005515] protein binding; [PF13832] PHD-zinc-finger like domain; [PF00856] SET domain; [PTHR22884] SET DOMAIN PROTEINS 61.97 0.7297 27 Mapoly0047s0098 [PF12710] haloacid dehalogenase-like hydrolase; [K01552] arsenite-transporting ATPase [EC:3.6.3.16]; [GO:0000166] nucleotide binding; [3.6.3.-] Acting on acid anhydrides; catalyzing transmembrane movement of substances.; [PTHR24093] FAMILY NOT NAMED; [GO:0046872] metal ion binding; [KOG0208] Cation transport ATPase; [PF00122] E1-E2 ATPase; [PTHR24093:SF84] CATION-TRANSPORTING P-TYPE ATPASE 64.14 0.5599 28 Mapoly0001s0017 [PTHR11618:SF4] TRANSCRIPTION FACTOR IIIB; [GO:0006355] regulation of transcription, DNA-dependent; [PF00382] Transcription factor TFIIB repeat; [GO:0006352] DNA-dependent transcription, initiation; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0000126] transcription factor TFIIIB complex; [PF07741] Brf1-like TBP-binding domain; [GO:0008270] zinc ion binding; [GO:0017025] TBP-class protein binding; [GO:0006384] transcription initiation from RNA polymerase III promoter; [KOG1598] Transcription initiation factor TFIIIB, Brf1 subunit 66.09 0.7148 29 Mapoly0065s0003 [PTHR22849] WDSAM1 PROTEIN; [GO:0016567] protein ubiquitination; [KOG0166] Karyopherin (importin) alpha; [GO:0004842] ubiquitin-protein ligase activity; [PF04564] U-box domain 66.78 0.6013 30 Mapoly0021s0008 [PTHR12895] FAMILY NOT NAMED; [KOG2225] Proteins containing regions of low-complexity; [PF09742] Dyggve-Melchior-Clausen syndrome protein 68.01 0.7070 31 Mapoly0175s0011 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR15600] FAMILY NOT NAMED; [PF13920] Zinc finger, C3HC4 type (RING finger) 68.93 0.6843 32 Mapoly0001s0292 [KOG1913] Regucalcin gene promoter region-related protein (RGPR); [GO:0048208] COPII vesicle coating; [PF12932] Vesicle coat trafficking protein Sec16 mid-region; [PTHR13402] RGPR-RELATED; [PF12931] Sec23-binding domain of Sec16 69.73 0.7118 33 Mapoly0043s0132 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain; [PF00176] SNF2 family N-terminal domain; [PF06465] Domain of Unknown Function (DUF1087); [KOG0383] Predicted helicase 70.00 0.6761 34 Mapoly0028s0080 [GO:0005515] protein binding; [PTHR16266] WD REPEAT DOMAIN 9; [PF00439] Bromodomain; [KOG0644] Uncharacterized conserved protein, contains WD40 repeat and BROMO domains; [PF00400] WD domain, G-beta repeat 71.33 0.7077 35 Mapoly0002s0107 [KOG2177] Predicted E3 ubiquitin ligase 76.73 0.7098 36 Mapoly0005s0106 [PTHR21450:SF9] UNCHARACTERIZED; [PF04783] Protein of unknown function (DUF630); [PF04782] Protein of unknown function (DUF632); [PTHR21450] UNCHARACTERIZED 77.85 0.6684 37 Mapoly0036s0148 [PTHR15000:SF1] SUBFAMILY NOT NAMED; [PTHR15000] FAMILY NOT NAMED 78.74 0.7159 38 Mapoly0085s0091 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE 81.58 0.7058 39 Mapoly0110s0011 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG1875] Thyroid hormone receptor-associated coactivator complex component (TRAP170); [PTHR12809:SF2] SUBFAMILY NOT NAMED; [PTHR12809] MEDIATOR COMPLEX SUBUNIT; [PF08638] Mediator complex subunit MED14; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex 84.29 0.7040 40 Mapoly0049s0111 [GO:0016020] membrane; [PF13334] Domain of unknown function (DUF4094); [GO:0006486] protein glycosylation; [KOG2288] Galactosyltransferases; [GO:0008378] galactosyltransferase activity; [PF01762] Galactosyltransferase; [PTHR11214] BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 88.18 0.6738 41 Mapoly0043s0095 [PTHR21717:SF12] PROTEIN LCHN [SOURCE:UNIPROTKB/SWISS-PROT,ACC:Q1LX49]; [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN 88.95 0.6865 42 Mapoly0020s0144 [K11266] MAternally affected uncoordination; [PTHR21394] UNCHARACTERIZED; [PF10345] Cohesin loading factor; [KOG2300] Uncharacterized conserved protein 91.21 0.6345 43 Mapoly0022s0091 [PTHR23339] TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE; [PF14566] Inositol hexakisphosphate 93.08 0.6579 44 Mapoly0081s0024 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [KOG0389] SNF2 family DNA-dependent ATPase 94.68 0.7047 45 Mapoly0105s0039 [PF06101] Plant protein of unknown function (DUF946); [PF06650] Protein of unknown function (DUF1162); [PF06398] Integral peroxisomal membrane peroxin; [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter; [PTHR16166:SF61] PUTATIVE UNCHARACTERIZED PROTEIN 97.44 0.6482 46 Mapoly0013s0045 - 97.67 0.6948 47 Mapoly0162s0017 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799:SF131] SWI/SNF CHROMATIN REMODELING COMPLEX COMPONENT; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain; [PF00855] PWWP domain; [PF00176] SNF2 family N-terminal domain; [PF06465] Domain of Unknown Function (DUF1087); [PF00271] Helicase conserved C-terminal domain; [KOG0383] Predicted helicase 98.94 0.6903 48 Mapoly0020s0113 [GO:0000287] magnesium ion binding; [PTHR24092] FAMILY NOT NAMED; [GO:0005524] ATP binding; [PF12710] haloacid dehalogenase-like hydrolase; [KOG0206] P-type ATPase; [3.6.3.1] Phospholipid-translocating ATPase.; [GO:0000166] nucleotide binding; [GO:0015914] phospholipid transport; [GO:0016021] integral to membrane; [K01530] phospholipid-translocating ATPase [EC:3.6.3.1]; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [GO:0004012] phospholipid-translocating ATPase activity 101.14 0.7031 49 Mapoly0052s0082 - 101.83 0.6516 50 Mapoly0001s0118 [GO:0005515] protein binding; [PF00856] SET domain; [PTHR22884] SET DOMAIN PROTEINS 102.98 0.6956