Guide Gene

Gene ID
Mapoly0041s0126
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR32098] FAMILY NOT NAMED; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0016117] carotenoid biosynthetic process; [K14606] lycopene cyclase CruP; [PF05834] Lycopene cyclase protein

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0041s0126 [PTHR32098] FAMILY NOT NAMED; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0016117] carotenoid biosynthetic process; [K14606] lycopene cyclase CruP; [PF05834] Lycopene cyclase protein 0.00 1.0000
1 Mapoly0071s0065 [PF04134] Protein of unknown function, DUF3931.410.7274
2 Mapoly0050s0038 [KOG4245] Predicted metal-dependent hydrolase of the TIM-barrel fold; [PTHR21240:SF5] SUBFAMILY NOT NAMED; [PF04909] Amidohydrolase; [GO:0008152] metabolic process; [PTHR21240] 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE; [GO:0003824] catalytic activity3.160.6790
3 Mapoly0005s0071 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE4.470.7198
4 Mapoly0016s0142 [GO:0005524] ATP binding; [KOG2355] Predicted ABC-type transport, ATPase component/CCR4 associated factor; [K12608] CCR4-NOT complex subunit CAF16; [GO:0016887] ATPase activity; [PTHR12847:SF6] SUBFAMILY NOT NAMED; [PTHR12847] ATP-BINDING CASSETTE (ABC) TRANSPORTER-RELATED; [PF00005] ABC transporter6.630.6875
5 Mapoly0180s0025 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily7.750.6752
6 Mapoly0002s0333 [1.8.1.7] Glutathione-disulfide reductase.; [GO:0050660] flavin adenine dinucleotide binding; [KOG0405] Pyridine nucleotide-disulphide oxidoreductase; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [K00383] glutathione reductase (NADPH) [EC:1.8.1.7]; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [PF07992] Pyridine nucleotide-disulphide oxidoreductase9.540.6728
7 Mapoly0193s0023 [GO:0005515] protein binding; [PF00043] Glutathione S-transferase, C-terminal domain; [PF13417] Glutathione S-transferase, N-terminal domain; [KOG0867] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING10.200.6266
8 Mapoly0028s0048 [GO:0004106] chorismate mutase activity; [5.4.99.5] Chorismate mutase.; [GO:0046417] chorismate metabolic process; [KOG0795] Chorismate mutase; [GO:0009073] aromatic amino acid family biosynthetic process; [PTHR21145:SF0] SUBFAMILY NOT NAMED; [PF01817] Chorismate mutase type II; [K01850] chorismate mutase [EC:5.4.99.5]; [PTHR21145] CHORISMATE MUTASE10.680.6123
9 Mapoly0105s0016 [GO:0005524] ATP binding; [KOG1051] Chaperone HSP104 and related ATP-dependent Clp proteases; [PF07724] AAA domain (Cdc48 subfamily); [K03695] ATP-dependent Clp protease ATP-binding subunit ClpB; [PF02861] Clp amino terminal domain; [PF10431] C-terminal, D2-small domain, of ClpB protein; [PTHR11638] ATP-DEPENDENT CLP PROTEASE; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0019538] protein metabolic process12.370.6939
10 Mapoly0011s0175 [GO:0016020] membrane; [GO:0006814] sodium ion transport; [GO:0055085] transmembrane transport; [PTHR10283] SOLUTE CARRIER FAMILY 13 MEMBER; [PF00939] Sodium:sulfate symporter transmembrane region; [GO:0005215] transporter activity15.490.6590
11 Mapoly0186s0017 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase18.000.6149
12 Mapoly0003s0021 [GO:0017004] cytochrome complex assembly; [GO:0005886] plasma membrane; [GO:0017003] protein-heme linkage; [PF03100] CcmE20.830.6264
13 Mapoly0175s0009 [PTHR13068] CGI-12 PROTEIN-RELATED21.350.6059
14 Mapoly0053s0025 [K01711] GDPmannose 4,6-dehydratase [EC:4.2.1.47]; [PTHR10366:SF32] GDP MANNOSE-4,6-DEHYDRATASE; [4.2.1.47] GDP-mannose 4,6-dehydratase.; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1372] GDP-mannose 4,6 dehydratase; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE26.460.6089
15 Mapoly0135s0018 [PTHR11662] SODIUM-DEPENDENT PHOSPHATE TRANSPORTERS; [GO:0016021] integral to membrane; [KOG2532] Permease of the major facilitator superfamily; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily26.980.5982
16 Mapoly0035s0102 [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [K03885] NADH dehydrogenase [EC:1.6.99.3]; [1.6.99.3] NADH dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [KOG2495] NADH-dehydrogenase (ubiquinone); [PF07992] Pyridine nucleotide-disulphide oxidoreductase; [PTHR22915] NADH DEHYDROGENASE-RELATED27.060.6297
17 Mapoly0087s0086 -32.860.5292
18 Mapoly0005s0066 [PTHR22749] RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE; [GO:0009231] riboflavin biosynthetic process; [GO:0008531] riboflavin kinase activity; [PF01687] Riboflavin kinase; [PTHR22749:SF1] RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE; [2.7.1.26] Riboflavin kinase.; [PF13419] Haloacid dehalogenase-like hydrolase; [K00861] riboflavin kinase [EC:2.7.1.26]; [KOG3110] Riboflavin kinase33.470.6244
19 Mapoly0014s0065 [PTHR13593] UNCHARACTERIZED35.210.5795
20 Mapoly0045s0101 [KOG1396] Uncharacterized conserved protein; [PTHR12953] MEMBRANE PROTEIN CH1 RELATED; [PF07738] Sad1 / UNC-like C-terminal; [PTHR12953:SF1] MEMBRANE PROTEIN CH1 RELATED35.720.5972
21 Mapoly0046s0069 [PTHR31096] FAMILY NOT NAMED36.000.5698
22 Mapoly0029s0117 [KOG1344] Predicted histone deacetylase; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE38.680.6343
23 Mapoly0067s0028 [GO:0051087] chaperone binding; [PTHR21237] GRPE PROTEIN; [PF01025] GrpE; [GO:0006457] protein folding; [GO:0042803] protein homodimerization activity; [K03687] molecular chaperone GrpE; [KOG3003] Molecular chaperone of the GrpE family; [GO:0000774] adenyl-nucleotide exchange factor activity38.920.6245
24 Mapoly0089s0006 [PF03781] Sulfatase-modifying factor enzyme 1; [PTHR30468] ALPHA-KETOGLUTARATE-DEPENDENT SULFONATE DIOXYGENASE; [PF12867] DinB superfamily; [PF10017] Histidine-specific methyltransferase, SAM-dependent39.120.6382
25 Mapoly0001s0079 [GO:0008152] metabolic process; [PTHR24322] FAMILY NOT NAMED; [PF00106] short chain dehydrogenase; [KOG0725] Reductases with broad range of substrate specificities; [GO:0016491] oxidoreductase activity41.420.6035
26 Mapoly0246s0004 [GO:0055114] oxidation-reduction process; [PTHR31155] ACYL-(ACYL-CARRIER-PROTEIN) DESATURASE-RELATED; [GO:0006631] fatty acid metabolic process; [1.14.19.2] Acyl-[acyl-carrier-protein] desaturase.; [PF03405] Fatty acid desaturase; [K03921] acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2]; [GO:0045300] acyl-[acyl-carrier-protein] desaturase activity43.010.5834
27 Mapoly0080s0011 [PTHR22870:SF29] SUBFAMILY NOT NAMED; [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF00415] Regulator of chromosome condensation (RCC1) repeat43.990.5753
28 Mapoly0009s0130 [GO:0050660] flavin adenine dinucleotide binding; [K00384] thioredoxin reductase (NADPH) [EC:1.8.1.9]; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [1.8.1.9] Thioredoxin-disulfide reductase.; [KOG0404] Thioredoxin reductase; [PF07992] Pyridine nucleotide-disulphide oxidoreductase47.370.5752
29 Mapoly0067s0039 [GO:0055114] oxidation-reduction process; [K00430] peroxidase [EC:1.11.1.7]; [PF00141] Peroxidase; [GO:0020037] heme binding; [1.11.1.7] Peroxidase.; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity; [PTHR31388] FAMILY NOT NAMED48.290.6061
30 Mapoly0093s0052 -50.080.5590
31 Mapoly0004s0190 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [KOG2602] Predicted cell surface protein homologous to bacterial outer membrane proteins; [PF01103] Surface antigen52.100.6061
32 Mapoly0027s0096 [PF01430] Hsp33 protein; [GO:0005737] cytoplasm; [PTHR30111] HEAT-SHOCK PROTEIN HSP33; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding54.420.6427
33 Mapoly0066s0007 [PF00291] Pyridoxal-phosphate dependent enzyme; [KOG1252] Cystathionine beta-synthase and related enzymes; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE56.830.6193
34 Mapoly0023s0119 [KOG1322] GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase; [PF00483] Nucleotidyl transferase; [GO:0009058] biosynthetic process; [PTHR22572] SUGAR-1-PHOSPHATE GUANYL TRANSFERASE; [GO:0016779] nucleotidyltransferase activity; [2.7.7.27] Glucose-1-phosphate adenylyltransferase.; [K00975] glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]62.350.5393
35 Mapoly0089s0038 [PTHR18959] CALPONIN/TRANSGELIN; [PF01476] LysM domain66.180.5457
36 Mapoly0248s0004 [GO:0016020] membrane; [PF01554] MatE; [GO:0015238] drug transmembrane transporter activity; [GO:0015297] antiporter activity; [GO:0055085] transmembrane transport; [PTHR11206] MULTIDRUG RESISTANCE PROTEIN; [KOG1347] Uncharacterized membrane protein, predicted efflux pump; [GO:0006855] drug transmembrane transport66.810.5462
37 Mapoly0129s0051 [GO:0050660] flavin adenine dinucleotide binding; [K00384] thioredoxin reductase (NADPH) [EC:1.8.1.9]; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [PF00085] Thioredoxin; [1.8.1.9] Thioredoxin-disulfide reductase.; [KOG0404] Thioredoxin reductase; [PF07992] Pyridine nucleotide-disulphide oxidoreductase67.530.5958
38 Mapoly0014s0161 [PTHR23029] PHOSPHOGLYCERATE MUTASE; [KOG0235] Phosphoglycerate mutase; [PF00300] Histidine phosphatase superfamily (branch 1)67.820.5545
39 Mapoly0095s0045 [PF00475] Imidazoleglycerol-phosphate dehydratase; [PTHR23133] IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7; [GO:0000105] histidine biosynthetic process; [GO:0004424] imidazoleglycerol-phosphate dehydratase activity; [4.2.1.19] Imidazoleglycerol-phosphate dehydratase.; [KOG3143] Imidazoleglycerol-phosphate dehydratase; [K01693] imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]69.650.5909
40 Mapoly0171s0004 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PTHR24223] FAMILY NOT NAMED; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG0054] Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [K05672] ATP-binding cassette, subfamily C (CFTR/MRP), member 12; [PF00005] ABC transporter70.990.5851
41 Mapoly0009s0122 [K00036] glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]; [GO:0055114] oxidation-reduction process; [PF02781] Glucose-6-phosphate dehydrogenase, C-terminal domain; [PF00479] Glucose-6-phosphate dehydrogenase, NAD binding domain; [GO:0006006] glucose metabolic process; [1.1.1.49] Glucose-6-phosphate dehydrogenase.; [GO:0004345] glucose-6-phosphate dehydrogenase activity; [GO:0050661] NADP binding; [KOG0563] Glucose-6-phosphate 1-dehydrogenase; [PTHR23429] GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE (G6PD)72.560.5797
42 Mapoly0037s0097 [PF08547] Complex I intermediate-associated protein 30 (CIA30); [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR13194:SF7] COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30; [PTHR13194] COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 3079.520.5508
43 Mapoly0015s0052 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE80.550.6081
44 Mapoly0062s0101 [PF03018] Dirigent-like protein; [PTHR21495] NUCLEOPORIN-RELATED84.710.5121
45 Mapoly0187s0001 [GO:0005840] ribosome; [PTHR21569:SF1] RIBOSOMAL PROTEIN S9; [KOG1753] 40S ribosomal protein S16; [K02996] small subunit ribosomal protein S9; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [GO:0006412] translation85.290.6054
46 Mapoly0041s0059 [PF00501] AMP-binding enzyme; [KOG1175] Acyl-CoA synthetase; [K01895] acetyl-CoA synthetase [EC:6.2.1.1]; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity; [6.2.1.1] Acetate--CoA ligase.86.420.5330
47 Mapoly0068s0095 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF45] SUBFAMILY NOT NAMED; [KOG0768] Mitochondrial carrier protein PET887.240.5180
48 Mapoly0202s0014 [KOG0625] Phosphoglucomutase; [K01835] phosphoglucomutase [EC:5.4.2.2]; [PTHR22573] PHOSPHOHEXOMUTASE FAMILY MEMBER; [GO:0016868] intramolecular transferase activity, phosphotransferases; [GO:0005975] carbohydrate metabolic process; [5.4.2.2] Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent).; [PF02879] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; [PF02878] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; [PF02880] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; [PF00408] Phosphoglucomutase/phosphomannomutase, C-terminal domain89.120.5747
49 Mapoly1717s0001 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF01453] D-mannose binding lectin; [PF00332] Glycosyl hydrolases family 1789.170.5491
50 Mapoly0033s0118 [K00831] phosphoserine aminotransferase [EC:2.6.1.52]; [KOG2790] Phosphoserine aminotransferase; [GO:0008152] metabolic process; [PTHR21152] AMINOTRANSFERASE CLASS V; [2.6.1.52] Phosphoserine transaminase.; [PF00266] Aminotransferase class-V90.830.5532
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