Guide Gene

Gene ID
Mapoly0040s0116
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR31282] FAMILY NOT NAMED; [PF03106] WRKY DNA -binding domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0040s0116 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR31282] FAMILY NOT NAMED; [PF03106] WRKY DNA -binding domain 0.00 1.0000
1 Mapoly0046s0074 [PF08569] Mo25-like; [KOG1566] Conserved protein Mo25; [PTHR10182] CALCIUM-BINDING PROTEIN 39-RELATED; [K08272] calcium binding protein 393.460.6891
2 Mapoly0004s0104 [GO:0045454] cell redox homeostasis; [PF13848] Thioredoxin-like domain; [KOG0190] Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit); [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE7.750.6618
3 Mapoly0090s0043 [3.5.2.17] Hydroxyisourate hydrolase.; [K13484] 5-hydroxyisourate hydrolase / 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:3.5.2.17 4.1.1.-]; [PF00576] HIUase/Transthyretin family; [PF09349] OHCU decarboxylase; [4.1.1.-] Carboxy-lyases.; [KOG3006] Transthyretin and related proteins; [PTHR10395] URICASE AND TRANSTHYRETIN-RELATED11.400.6521
4 Mapoly0087s0066 [GO:0016021] integral to membrane; [PF06140] Interferon-induced 6-16 family11.660.6813
5 Mapoly0033s0162 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding12.770.7089
6 Mapoly0033s0059 [PF13950] UDP-glucose 4-epimerase C-term subunit; [GO:0003978] UDP-glucose 4-epimerase activity; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1371] UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase; [K12448] UDP-arabinose 4-epimerase [EC:5.1.3.5]; [GO:0006012] galactose metabolic process; [5.1.3.5] UDP-arabinose 4-epimerase.; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE13.230.6725
7 Mapoly0104s0031 [PF01885] RNA 2'-phosphotransferase, Tpt1 / KptA family; [PTHR12684] PUTATIVE PHOSPHOTRANSFERASE; [PTHR12684:SF2] SUBFAMILY NOT NAMED; [GO:0006388] tRNA splicing, via endonucleolytic cleavage and ligation; [KOG2278] RNA:NAD 2'-phosphotransferase TPT1; [GO:0016772] transferase activity, transferring phosphorus-containing groups13.420.6648
8 Mapoly0001s0147 [PF04535] Domain of unknown function (DUF588); [PTHR32021] FAMILY NOT NAMED14.870.6453
9 Mapoly0064s0029 [GO:0055114] oxidation-reduction process; [PF00141] Peroxidase; [GO:0020037] heme binding; [PTHR31235] FAMILY NOT NAMED; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity16.970.6538
10 Mapoly0067s0083 [PF05562] Cold acclimation protein WCOR41318.250.6860
11 Mapoly0029s0035 [PF10604] Polyketide cyclase / dehydrase and lipid transport20.860.6494
12 Mapoly0087s0065 [GO:0016021] integral to membrane; [PF06140] Interferon-induced 6-16 family22.980.6541
13 Mapoly0016s0107 [PF01522] Polysaccharide deacetylase; [GO:0005975] carbohydrate metabolic process; [PTHR10587] GLYCOSYL TRANSFERASE-RELATED; [GO:0016810] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds25.980.6095
14 Mapoly0094s0063 [PTHR24119:SF0] SUBFAMILY NOT NAMED; [PF00887] Acyl CoA binding protein; [PTHR24119] FAMILY NOT NAMED; [GO:0000062] fatty-acyl-CoA binding; [KOG0817] Acyl-CoA-binding protein; [PF12796] Ankyrin repeats (3 copies)31.080.6757
15 Mapoly0168s0012 -33.110.6689
16 Mapoly0003s0005 [KOG1577] Aldo/keto reductase family proteins; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family35.000.6162
17 Mapoly0027s0141 [GO:0016020] membrane; [GO:0005524] ATP binding; [KOG0061] Transporter, ABC superfamily (Breast cancer resistance protein); [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF00005] ABC transporter37.420.6238
18 Mapoly0045s0019 [PTHR10891] EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding; [KOG0027] Calmodulin and related proteins (EF-Hand superfamily); [PF13202] EF hand39.340.6159
19 Mapoly0031s0060 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45039.690.6793
20 Mapoly0149s0032 -40.600.6492
21 Mapoly0007s0062 [PTHR31142] FAMILY NOT NAMED; [PF06454] Protein of unknown function (DUF1084)42.990.6503
22 Mapoly0072s0092 [KOG0172] Lysine-ketoglutarate reductase/saccharopine dehydrogenase; [GO:0055114] oxidation-reduction process; [PF04455] LOR/SDH bifunctional enzyme conserved region; [PF03435] Saccharopine dehydrogenase; [GO:0016491] oxidoreductase activity; [PF01262] Alanine dehydrogenase/PNT, C-terminal domain; [PTHR11133] SACCHAROPINE DEHYDROGENASE; [PF05222] Alanine dehydrogenase/PNT, N-terminal domain43.630.5605
23 Mapoly0049s0096 [PF04535] Domain of unknown function (DUF588); [PTHR11615] NITRATE, FROMATE, IRON DEHYDROGENASE43.890.5690
24 Mapoly0044s0050 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding45.520.6011
25 Mapoly0006s0173 [PF12937] F-box-like; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN46.000.6091
26 Mapoly0030s0130 [PTHR24067:SF26] UBIQUITIN-CONJUGATING ENZYME E2 A, B; [K10573] ubiquitin-conjugating enzyme E2 A [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [KOG0419] Ubiquitin-protein ligase; [6.3.2.19] Ubiquitin--protein ligase.; [PF00179] Ubiquitin-conjugating enzyme47.330.6344
27 Mapoly0127s0006 [K05391] cyclic nucleotide gated channel, other eukaryote; [PTHR10217] VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL52.150.5935
28 Mapoly0015s0034 -52.440.6262
29 Mapoly0160s0030 [K01723] hydroperoxide dehydratase [EC:4.2.1.92]; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [4.2.1.92] Hydroperoxide dehydratase.; [GO:0020037] heme binding; [PF00067] Cytochrome P450; [PTHR24286] FAMILY NOT NAMED56.670.6299
30 Mapoly0003s0059 -57.240.5078
31 Mapoly0043s0072 [PTHR24322] FAMILY NOT NAMED; [KOG0725] Reductases with broad range of substrate specificities; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase57.620.6123
32 Mapoly0184s0026 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED59.060.6197
33 Mapoly0007s0088 [K08360] cytochrome b-561; [GO:0016021] integral to membrane; [KOG1619] Cytochrome b; [PTHR10106] CYTOCHROME B561-RELATED; [PF03188] Eukaryotic cytochrome b56159.710.6209
34 Mapoly0016s0180 [PTHR32419] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG2903] Predicted glutathione S-transferase; [PF13410] Glutathione S-transferase, C-terminal domain; [K07393] putative glutathione S-transferase; [PF13409] Glutathione S-transferase, N-terminal domain62.860.6138
35 Mapoly0122s0003 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE63.870.5851
36 Mapoly0015s0035 -68.150.6112
37 Mapoly0083s0064 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PTHR11711:SF31] ADP-RIBOSYLATION FACTOR-LIKE 5, ARL5; [PF00025] ADP-ribosylation factor family; [K07977] Arf/Sar family, other; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding69.710.5536
38 Mapoly0001s0115 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF12796] Ankyrin repeats (3 copies)70.650.5959
39 Mapoly0126s0038 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11959] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [GO:0055114] oxidation-reduction process; [PTHR11959:SF1] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [1.13.11.27] 4-hydroxyphenylpyruvate dioxygenase.; [KOG0638] 4-hydroxyphenylpyruvate dioxygenase; [K00457] 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]; [GO:0016701] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; [GO:0003868] 4-hydroxyphenylpyruvate dioxygenase activity; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily71.060.6253
40 Mapoly0053s0061 -74.460.6277
41 Mapoly0079s0031 [1.3.99.10] Transferred entry: 1.3.8.4.; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [K00253] isovaleryl-CoA dehydrogenase [EC:1.3.99.10]; [PF02771] Acyl-CoA dehydrogenase, N-terminal domain; [PTHR10909] ELECTRON TRANSPORT OXIDOREDUCTASE; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [GO:0008152] metabolic process; [PF02770] Acyl-CoA dehydrogenase, middle domain; [PF00441] Acyl-CoA dehydrogenase, C-terminal domain; [GO:0003995] acyl-CoA dehydrogenase activity; [KOG0141] Isovaleryl-CoA dehydrogenase75.220.5836
42 Mapoly0050s0109 -75.370.6296
43 Mapoly0037s0127 -78.130.6147
44 Mapoly0002s0291 [GO:0016020] membrane; [PF01758] Sodium Bile acid symporter family; [GO:0008508] bile acid:sodium symporter activity; [GO:0006814] sodium ion transport; [KOG2718] Na+-bile acid cotransporter; [PTHR10361] SODIUM-BILE ACID COTRANSPORTER79.490.5913
45 Mapoly0159s0009 [GO:0005524] ATP binding; [K09680] type II pantothenate kinase [EC:2.7.1.33]; [2.7.1.33] Pantothenate kinase.; [GO:0004594] pantothenate kinase activity; [PF01937] Protein of unknown function DUF89; [PTHR12280] PANTOTHENATE KINASE; [GO:0015937] coenzyme A biosynthetic process; [PF03630] Fumble; [KOG2201] Pantothenate kinase PanK and related proteins80.110.5756
46 Mapoly0109s0016 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0941] E3 ubiquitin protein ligase; [GO:0004842] ubiquitin-protein ligase activity; [K10587] ubiquitin-protein ligase E3 A [EC:6.3.2.19]; [PF00632] HECT-domain (ubiquitin-transferase)82.370.6000
47 Mapoly0012s0029 [PTHR10891:SF372] SUBFAMILY NOT NAMED; [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [PTHR10891] EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding85.400.6170
48 Mapoly0185s0005 [GO:0005515] protein binding; [PF00043] Glutathione S-transferase, C-terminal domain; [PF02798] Glutathione S-transferase, N-terminal domain; [KOG0867] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING85.980.5789
49 Mapoly0088s0025 [3.2.1.26] Beta-fructofuranosidase.; [K01193] beta-fructofuranosidase [EC:3.2.1.26]; [PF00251] Glycosyl hydrolases family 32 N-terminal domain; [KOG0228] Beta-fructofuranosidase (invertase); [PTHR31953] FAMILY NOT NAMED; [PF08244] Glycosyl hydrolases family 32 C terminal86.530.6125
50 Mapoly0001s0549 [PF00668] Condensation domain87.090.5279
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