Guide Gene

Gene ID
Mapoly0033s0059
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13950] UDP-glucose 4-epimerase C-term subunit; [GO:0003978] UDP-glucose 4-epimerase activity; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1371] UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase; [K12448] UDP-arabinose 4-epimerase [EC:5.1.3.5]; [GO:0006012] galactose metabolic process; [5.1.3.5] UDP-arabinose 4-epimerase.; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0033s0059 [PF13950] UDP-glucose 4-epimerase C-term subunit; [GO:0003978] UDP-glucose 4-epimerase activity; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1371] UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase; [K12448] UDP-arabinose 4-epimerase [EC:5.1.3.5]; [GO:0006012] galactose metabolic process; [5.1.3.5] UDP-arabinose 4-epimerase.; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE 0.00 1.0000
1 Mapoly0007s0088 [K08360] cytochrome b-561; [GO:0016021] integral to membrane; [KOG1619] Cytochrome b; [PTHR10106] CYTOCHROME B561-RELATED; [PF03188] Eukaryotic cytochrome b5611.000.8166
2 Mapoly0055s0056 -2.450.7595
3 Mapoly0009s0150 [PF01039] Carboxyl transferase domain; [GO:0016874] ligase activity; [6.4.1.4] Methylcrotonoyl-CoA carboxylase.; [K01969] 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]; [KOG0540] 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta; [PTHR22855] ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED; [PTHR22855:SF13] ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE-RELATED4.470.7664
4 Mapoly0008s0179 [K00167] 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]; [PTHR11624] DEHYDROGENASE RELATED; [PTHR11624:SF21] BRANCHED CHAIN ALPHA KETO ACID DEHYDROGENASE E1 BETA SUBUNIT; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [GO:0003824] catalytic activity; [KOG0525] Branched chain alpha-keto acid dehydrogenase E1, beta subunit; [PF02780] Transketolase, C-terminal domain6.000.7551
5 Mapoly0127s0006 [K05391] cyclic nucleotide gated channel, other eukaryote; [PTHR10217] VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL6.000.7007
6 Mapoly0079s0031 [1.3.99.10] Transferred entry: 1.3.8.4.; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [K00253] isovaleryl-CoA dehydrogenase [EC:1.3.99.10]; [PF02771] Acyl-CoA dehydrogenase, N-terminal domain; [PTHR10909] ELECTRON TRANSPORT OXIDOREDUCTASE; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [GO:0008152] metabolic process; [PF02770] Acyl-CoA dehydrogenase, middle domain; [PF00441] Acyl-CoA dehydrogenase, C-terminal domain; [GO:0003995] acyl-CoA dehydrogenase activity; [KOG0141] Isovaleryl-CoA dehydrogenase6.630.7206
7 Mapoly0109s0016 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0941] E3 ubiquitin protein ligase; [GO:0004842] ubiquitin-protein ligase activity; [K10587] ubiquitin-protein ligase E3 A [EC:6.3.2.19]; [PF00632] HECT-domain (ubiquitin-transferase)7.350.7385
8 Mapoly0037s0069 -7.480.7285
9 Mapoly0126s0038 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11959] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [GO:0055114] oxidation-reduction process; [PTHR11959:SF1] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [1.13.11.27] 4-hydroxyphenylpyruvate dioxygenase.; [KOG0638] 4-hydroxyphenylpyruvate dioxygenase; [K00457] 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]; [GO:0016701] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; [GO:0003868] 4-hydroxyphenylpyruvate dioxygenase activity; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily10.950.7442
10 Mapoly0004s0104 [GO:0045454] cell redox homeostasis; [PF13848] Thioredoxin-like domain; [KOG0190] Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit); [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE12.450.6623
11 Mapoly0056s0009 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED12.960.7089
12 Mapoly0040s0116 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR31282] FAMILY NOT NAMED; [PF03106] WRKY DNA -binding domain13.230.6725
13 Mapoly0012s0124 [GO:0004174] electron-transferring-flavoprotein dehydrogenase activity; [PF13450] NAD(P)-binding Rossmann-like domain; [GO:0055114] oxidation-reduction process; [K00311] electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE; [1.5.5.1] Electron-transferring-flavoprotein dehydrogenase.; [PF05187] Electron transfer flavoprotein-ubiquinone oxidoreductase; [KOG2415] Electron transfer flavoprotein ubiquinone oxidoreductase13.270.7264
14 Mapoly0070s0008 [KOG0698] Serine/threonine protein phosphatase; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity13.420.7255
15 Mapoly0121s0030 [PTHR15852] FAMILY NOT NAMED18.330.7012
16 Mapoly0078s0002 [KOG1417] Homogentisate 1,2-dioxygenase; [GO:0055114] oxidation-reduction process; [PTHR11056:SF0] HOMOGENTISATE 1,2-DIOXYGENASE; [PTHR11056] HOMOGENTISATE 1,2-DIOXYGENASE; [GO:0006559] L-phenylalanine catabolic process; [PF04209] homogentisate 1,2-dioxygenase; [GO:0004411] homogentisate 1,2-dioxygenase activity; [GO:0006570] tyrosine metabolic process18.440.7227
17 Mapoly0161s0004 [K01376] cathepsin V [EC:3.4.22.43]; [GO:0008234] cysteine-type peptidase activity; [PF00396] Granulin; [3.4.22.-] Cysteine endopeptidases.; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis19.440.6673
18 Mapoly0011s0097 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [K06892] ATP-dependent Clp protease adaptor protein ClpS; [PF03171] 2OG-Fe(II) oxygenase superfamily19.750.6021
19 Mapoly0082s0038 [KOG2964] Arginase family protein; [PTHR11358] ARGINASE/AGMATINASE; [3.5.3.1] Arginase.; [K01476] arginase [EC:3.5.3.1]; [PF00491] Arginase family; [GO:0046872] metal ion binding20.350.6749
20 Mapoly0029s0078 [KOG1889] Putative phosphoinositide phosphatase; [PF02383] SacI homology domain; [PTHR11200] INOSITOL 5-PHOSPHATASE; [GO:0042578] phosphoric ester hydrolase activity20.740.6410
21 Mapoly0123s0022 -21.000.6808
22 Mapoly0040s0100 -21.170.6667
23 Mapoly0001s0147 [PF04535] Domain of unknown function (DUF588); [PTHR32021] FAMILY NOT NAMED21.630.6465
24 Mapoly0028s0140 [KOG0409] Predicted dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03446] NAD binding domain of 6-phosphogluconate dehydrogenase; [K00020] 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]; [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [GO:0004616] phosphogluconate dehydrogenase (decarboxylating) activity; [GO:0051287] NAD binding; [GO:0006098] pentose-phosphate shunt; [1.1.1.31] 3-hydroxyisobutyrate dehydrogenase.; [PF14833] NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase21.630.6511
25 Mapoly0103s0043 [PTHR16007] EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED; [PF04819] Family of unknown function (DUF716)21.930.6499
26 Mapoly0153s0034 [GO:0016021] integral to membrane; [PTHR21433] TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA; [KOG4758] Predicted membrane protein; [PF07851] TMPIT-like protein22.650.6958
27 Mapoly0019s0144 [PF02045] CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR12632] TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED23.450.6758
28 Mapoly0058s0041 [PTHR23309] 3-HYDROXYACYL-COA DEHYROGENASE; [K00074] 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]; [GO:0055114] oxidation-reduction process; [KOG2304] 3-hydroxyacyl-CoA dehydrogenase; [GO:0006631] fatty acid metabolic process; [1.1.1.157] 3-hydroxybutyryl-CoA dehydrogenase.; [GO:0016491] oxidoreductase activity; [PF00725] 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; [PF02737] 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; [GO:0003857] 3-hydroxyacyl-CoA dehydrogenase activity26.720.6543
29 Mapoly0087s0072 -26.740.7184
30 Mapoly0111s0005 [PF00168] C2 domain; [GO:0005515] protein binding27.280.6726
31 Mapoly0134s0029 [KOG4450] Uncharacterized conserved protein; [PTHR12510] TROPONIN C-AKIN-1 PROTEIN; [PTHR12510:SF4] SUBFAMILY NOT NAMED; [PF06094] AIG2-like family27.460.6698
32 Mapoly0168s0011 -29.150.6289
33 Mapoly0020s0148 -29.660.6821
34 Mapoly0132s0020 -30.250.7024
35 Mapoly0084s0013 [PTHR31351] FAMILY NOT NAMED; [PF05703] Auxin canalisation; [PF08458] Plant pleckstrin homology-like region30.400.6389
36 Mapoly0032s0095 [PF13855] Leucine rich repeat; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN33.630.6663
37 Mapoly0043s0072 [PTHR24322] FAMILY NOT NAMED; [KOG0725] Reductases with broad range of substrate specificities; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase34.410.6601
38 Mapoly0053s0061 -35.230.7011
39 Mapoly0046s0074 [PF08569] Mo25-like; [KOG1566] Conserved protein Mo25; [PTHR10182] CALCIUM-BINDING PROTEIN 39-RELATED; [K08272] calcium binding protein 3937.470.6274
40 Mapoly0160s0020 [KOG1404] Alanine-glyoxylate aminotransferase AGT2; [PTHR11986] AMINOTRANSFERASE CLASS III; [GO:0030170] pyridoxal phosphate binding; [GO:0008483] transaminase activity; [PTHR11986:SF49] 4-AMINOBUTYRATE AMINOTRANSFERASE; [PF00202] Aminotransferase class-III39.190.7198
41 Mapoly0058s0037 [PTHR12626:SF1] PDCD4-RELATED; [PTHR12626] PROGRAMMED CELL DEATH 440.620.6566
42 Mapoly0090s0094 -43.630.5826
43 Mapoly0053s0036 [PF00501] AMP-binding enzyme; [KOG1175] Acyl-CoA synthetase; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity44.280.6273
44 Mapoly0003s0299 [GO:0055114] oxidation-reduction process; [PTHR11695:SF264] ZINC-BINDING ALCOHOL DEHYDROGENASE DOMAIN-CONTAINING PROTEIN 2; [K07119] uncharacterized protein; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase; [KOG4169] 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED44.730.6097
45 Mapoly0053s0103 -45.060.6539
46 Mapoly0090s0043 [3.5.2.17] Hydroxyisourate hydrolase.; [K13484] 5-hydroxyisourate hydrolase / 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:3.5.2.17 4.1.1.-]; [PF00576] HIUase/Transthyretin family; [PF09349] OHCU decarboxylase; [4.1.1.-] Carboxy-lyases.; [KOG3006] Transthyretin and related proteins; [PTHR10395] URICASE AND TRANSTHYRETIN-RELATED45.520.6047
47 Mapoly0004s0014 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED46.090.6191
48 Mapoly0149s0032 -46.800.6653
49 Mapoly0029s0035 [PF10604] Polyketide cyclase / dehydrase and lipid transport49.480.6289
50 Mapoly0046s0083 [PTHR13148] PER1-RELATED; [PF04080] Per1-like; [KOG2970] Predicted membrane protein; [PTHR13148:SF0] SUBFAMILY NOT NAMED52.920.6198
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