Guide Gene

Gene ID
Mapoly0035s0104
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF01713] Smr domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0035s0104 [PF01713] Smr domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED 0.00 1.0000
1 Mapoly0022s0163 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0594] Protein kinase PCTAIRE and related kinases; [PTHR24056] CELL DIVISION PROTEIN KINASE1.000.6806
2 Mapoly0004s0069 [PF04842] Plant protein of unknown function (DUF639); [PTHR31860] FAMILY NOT NAMED10.770.5919
3 Mapoly0023s0096 -15.490.5699
4 Mapoly0152s0028 [KOG2819] Uncharacterized conserved protein; [PF03676] Uncharacterised protein family (UPF0183); [PTHR13465] UPF0183 PROTEIN17.750.5344
5 Mapoly0014s0050 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease; [PTHR15160:SF1] VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR22.000.5692
6 Mapoly0027s0151 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR10044] INHIBITOR OF APOPTOSIS; [PF13920] Zinc finger, C3HC4 type (RING finger)23.560.5576
7 Mapoly0124s0043 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED26.380.5382
8 Mapoly0116s0002 [PTHR21290] SPHINGOMYELIN SYNTHETASE; [PF00536] SAM domain (Sterile alpha motif)29.580.5466
9 Mapoly0007s0086 [PF00571] CBS domain; [KOG1764] 5'-AMP-activated protein kinase, gamma subunit; [PTHR13780] AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT; [GO:0030554] adenyl nucleotide binding29.730.5082
10 Mapoly0009s0167 [PF12483] E3 Ubiquitin ligase; [KOG1571] Predicted E3 ubiquitin ligase; [GO:0004842] ubiquitin-protein ligase activity; [GO:0007005] mitochondrion organization; [PF13920] Zinc finger, C3HC4 type (RING finger); [PTHR12183] UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN29.800.5559
11 Mapoly0082s0038 [KOG2964] Arginase family protein; [PTHR11358] ARGINASE/AGMATINASE; [3.5.3.1] Arginase.; [K01476] arginase [EC:3.5.3.1]; [PF00491] Arginase family; [GO:0046872] metal ion binding37.950.5311
12 Mapoly0037s0060 [PF00097] Zinc finger, C3HC4 type (RING finger); [PF04366] Family of unknown function (DUF500); [KOG1843] Uncharacterized conserved protein; [GO:0046872] metal ion binding; [PF01363] FYVE zinc finger; [PTHR15629] SH3YL1 PROTEIN40.250.4936
13 Mapoly0056s0073 -45.030.5169
14 Mapoly0053s0103 -56.670.5163
15 Mapoly0007s0197 [GO:0033926] glycopeptide alpha-N-acetylgalactosaminidase activity; [PF12899] Alkaline and neutral invertase; [PTHR31916] FAMILY NOT NAMED58.960.5231
16 Mapoly0019s0144 [PF02045] CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR12632] TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED59.040.5154
17 Mapoly0028s0025 [GO:0005097] Rab GTPase activator activity; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain59.330.4856
18 Mapoly0019s0103 [K09598] signal peptide peptidase-like 3 [EC:3.4.23.-]; [PTHR12174] SIGNAL PEPTIDE PEPTIDASE; [GO:0016021] integral to membrane; [PTHR12174:SF22] SIGNAL PEPTIDE PEPTIDASE-LIKE 3; [PF04258] Signal peptide peptidase; [KOG2443] Uncharacterized conserved protein; [GO:0004190] aspartic-type endopeptidase activity; [3.4.23.-] Aspartic endopeptidases.59.700.4895
19 Mapoly0102s0004 -60.930.4936
20 Mapoly0011s0039 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [K08869] aarF domain-containing kinase63.250.5043
21 Mapoly0033s0018 [K00207] dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2]; [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [1.3.1.2] Dihydropyrimidine dehydrogenase (NADP(+)).; [GO:0055114] oxidation-reduction process; [KOG1799] Dihydropyrimidine dehydrogenase; [PF01180] Dihydroorotate dehydrogenase; [GO:0004152] dihydroorotate dehydrogenase activity; [GO:0006222] UMP biosynthetic process64.990.4910
22 Mapoly0187s0016 [GO:0005524] ATP binding; [K01968] 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]; [GO:0016874] ligase activity; [6.4.1.4] Methylcrotonoyl-CoA carboxylase.; [PF02785] Biotin carboxylase C-terminal domain; [KOG0238] 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit; [PF00289] Carbamoyl-phosphate synthase L chain, N-terminal domain; [PF00364] Biotin-requiring enzyme; [GO:0008152] metabolic process; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE; [GO:0003824] catalytic activity; [PF02786] Carbamoyl-phosphate synthase L chain, ATP binding domain68.520.5114
23 Mapoly0154s0034 [KOG1256] Long-chain acyl-CoA synthetases (AMP-forming); [K01897] long-chain acyl-CoA synthetase [EC:6.2.1.3]; [PF00501] AMP-binding enzyme; [PTHR24096:SF46] PUTATIVE UNCHARACTERIZED PROTEIN; [6.2.1.3] Long-chain-fatty-acid--CoA ligase.; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED69.890.5015
24 Mapoly0053s0036 [PF00501] AMP-binding enzyme; [KOG1175] Acyl-CoA synthetase; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity71.330.4996
25 Mapoly0001s0505 [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat72.110.5108
26 Mapoly0154s0038 [GO:0055114] oxidation-reduction process; [PF00141] Peroxidase; [GO:0020037] heme binding; [PTHR31235] FAMILY NOT NAMED; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity72.830.4867
27 Mapoly0029s0078 [KOG1889] Putative phosphoinositide phosphatase; [PF02383] SacI homology domain; [PTHR11200] INOSITOL 5-PHOSPHATASE; [GO:0042578] phosphoric ester hydrolase activity73.970.4920
28 Mapoly0101s0014 -78.690.5081
29 Mapoly0005s0117 -79.000.4421
30 Mapoly0111s0005 [PF00168] C2 domain; [GO:0005515] protein binding79.530.4983
31 Mapoly0011s0038 [PF11815] Domain of unknown function (DUF3336); [KOG2214] Predicted esterase of the alpha-beta hydrolase superfamily; [PF01734] Patatin-like phospholipase; [K14674] TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]; [3.1.1.13] Sterol esterase.; [3.1.1.3] Triacylglycerol lipase.; [2.3.1.51] 1-acylglycerol-3-phosphate O-acyltransferase.; [3.1.1.4] Phospholipase A(2).; [PTHR14226] NEUROPATHY TARGET ESTERASE/SWISS CHEESE(D.MELANOGASTER); [GO:0006629] lipid metabolic process80.680.5002
32 Mapoly0046s0012 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0010277] chlorophyllide a oxygenase [overall] activity; [GO:0055114] oxidation-reduction process; [PF08417] Pheophorbide a oxygenase; [PTHR21266] IRON-SULFUR DOMAIN CONTAINING PROTEIN; [GO:0016491] oxidoreductase activity; [1.14.12.20] Pheophorbide a oxygenase.; [PF00355] Rieske [2Fe-2S] domain; [K13071] pheophorbide a oxygenase [EC:1.14.12.20]80.960.5076
33 Mapoly0072s0023 [PTHR13128] FAMILY NOT NAMED; [KOG2760] Vacuolar sorting protein VPS36; [PF04157] EAP30/Vps36 family; [K12190] ESCRT-II complex subunit VPS3684.000.4746
34 Mapoly0086s0068 [K01464] dihydropyrimidinase [EC:3.5.2.2]; [3.5.2.2] Dihydropyrimidinase.; [PTHR11647:SF1] DIHYDROPYRIMIDINASE; [KOG2584] Dihydroorotase and related enzymes; [PF13147] Amidohydrolase; [PTHR11647] AMINOHYDROLASE86.490.4908
35 Mapoly0002s0278 [PF09713] Plant protein 1589 of unknown function (A_thal_3526); [PTHR31871] FAMILY NOT NAMED88.740.4495
36 Mapoly0043s0139 [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF01764] Lipase (class 3); [GO:0006629] lipid metabolic process90.960.5021
37 Mapoly0121s0030 [PTHR15852] FAMILY NOT NAMED92.160.4929
38 Mapoly0154s0024 [KOG2761] START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer; [PTHR19308] PHOSPHATIDYLCHOLINE TRANSFER PROTEIN93.020.4947
39 Mapoly0026s0025 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting95.460.4086
40 Mapoly0030s0011 [PTHR20922] UNCHARACTERIZED; [GO:0008270] zinc ion binding; [PF05180] DNL zinc finger96.880.4969
41 Mapoly0134s0021 [PTHR11005:SF6] gb def: lipase 2 [drosophila melanogaster]; [PTHR11005] LYSOSOMAL ACID LIPASE-RELATED; [PF04083] Partial alpha/beta-hydrolase lipase region; [KOG2624] Triglyceride lipase-cholesterol esterase; [PF00561] alpha/beta hydrolase fold; [GO:0006629] lipid metabolic process101.090.4906
42 Mapoly0189s0007 -102.510.4210
43 Mapoly0079s0072 [GO:0008270] zinc ion binding; [PF12428] Protein of unknown function (DUF3675); [PF12906] RING-variant domain; [PTHR23012] MEMBRANE ASSOCIATED RING FINGER104.180.4602
44 Mapoly0173s0005 -104.990.4438
45 Mapoly0055s0094 [K03522] electron transfer flavoprotein alpha subunit; [PTHR10909] ELECTRON TRANSPORT OXIDOREDUCTASE; [KOG3954] Electron transfer flavoprotein, alpha subunit; [PF01012] Electron transfer flavoprotein domain; [PF00766] Electron transfer flavoprotein FAD-binding domain105.600.4853
46 Mapoly0012s0124 [GO:0004174] electron-transferring-flavoprotein dehydrogenase activity; [PF13450] NAD(P)-binding Rossmann-like domain; [GO:0055114] oxidation-reduction process; [K00311] electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE; [1.5.5.1] Electron-transferring-flavoprotein dehydrogenase.; [PF05187] Electron transfer flavoprotein-ubiquinone oxidoreductase; [KOG2415] Electron transfer flavoprotein ubiquinone oxidoreductase108.370.4781
47 Mapoly0090s0094 -110.450.4527
48 Mapoly0031s0130 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED113.470.4014
49 Mapoly0029s0042 [GO:0006355] regulation of transcription, DNA-dependent; [PF00382] Transcription factor TFIIB repeat; [GO:0006352] DNA-dependent transcription, initiation; [K03124] transcription initiation factor TFIIB; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [PTHR11618:SF13] TRANSCRIPTION INITIATION FACTOR IIB; [KOG1597] Transcription initiation factor TFIIB; [GO:0017025] TBP-class protein binding116.190.4564
50 Mapoly0009s0150 [PF01039] Carboxyl transferase domain; [GO:0016874] ligase activity; [6.4.1.4] Methylcrotonoyl-CoA carboxylase.; [K01969] 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]; [KOG0540] 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta; [PTHR22855] ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED; [PTHR22855:SF13] ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE-RELATED116.880.4774
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