Guide Gene

Gene ID
Mapoly0028s0101
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF25] NAI1, DNA BINDING / TRANSCRIPTION FACTOR; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0028s0101 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF25] NAI1, DNA BINDING / TRANSCRIPTION FACTOR; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS 0.00 1.0000
1 Mapoly0028s0100 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR31945] FAMILY NOT NAMED1.410.8072
2 Mapoly0112s0050 -2.830.7779
3 Mapoly0031s0098 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily8.660.7825
4 Mapoly0168s0012 -12.000.7594
5 Mapoly0025s0122 [3.4.13.9] Xaa-Pro dipeptidase.; [PF05195] Aminopeptidase P, N-terminal domain; [GO:0004177] aminopeptidase activity; [K14213] Xaa-Pro dipeptidase [EC:3.4.13.9]; [GO:0030145] manganese ion binding; [PF00557] Metallopeptidase family M24; [PTHR10804:SF17] XAA-PRO DIPEPTIDASE; [KOG2737] Putative metallopeptidase; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)12.730.7844
6 Mapoly0092s0020 [PTHR13199] FAMILY NOT NAMED; [PF13915] Domain of unknown function (DUF4210); [PF13889] Chromosome segregation during meiosis17.320.7406
7 Mapoly0009s0237 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24349] SERINE/THREONINE-PROTEIN KINASE; [GO:0006468] protein phosphorylation; [KOG0032] Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily19.420.7511
8 Mapoly0001s0216 [KOG0121] Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily); [PTHR24012] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)22.140.7703
9 Mapoly0001s0136 -28.710.7595
10 Mapoly0140s0024 [K06689] ubiquitin-conjugating enzyme E2 D/E [EC:6.3.2.19]; [GO:0016881] acid-amino acid ligase activity; [PTHR24068] FAMILY NOT NAMED; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme31.460.7693
11 Mapoly0003s0005 [KOG1577] Aldo/keto reductase family proteins; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family32.370.6739
12 Mapoly0020s0010 -32.470.7451
13 Mapoly0009s0032 [PF04278] Tic22-like family38.080.7338
14 Mapoly0002s0002 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [GO:0050660] flavin adenine dinucleotide binding; [PTHR13878] GULONOLACTONE OXIDASE; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PF01565] FAD binding domain38.830.7356
15 Mapoly0055s0044 [KOG1515] Arylacetamide deacetylase; [GO:0016787] hydrolase activity; [K14493] gibberellin receptor GID1 [EC:3.-.-.-]; [GO:0008152] metabolic process; [PF07859] alpha/beta hydrolase fold; [3.-.-.-] Hydrolases.; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES39.420.7218
16 Mapoly0050s0118 [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF01764] Lipase (class 3); [GO:0006629] lipid metabolic process40.410.7029
17 Mapoly0010s0043 [PTHR11999] GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE42.250.6844
18 Mapoly0021s0162 [PF07969] Amidohydrolase family; [PTHR22642] IMIDAZOLONEPROPIONASE43.750.7554
19 Mapoly0002s0232 [KOG1385] Nucleoside phosphatase; [GO:0016787] hydrolase activity; [PTHR11782] ADENOSINE/GUANOSINE DIPHOSPHATASE; [K14641] apyrase [EC:3.6.1.5]; [3.6.1.5] Apyrase.; [PF01150] GDA1/CD39 (nucleoside phosphatase) family43.990.7464
20 Mapoly0142s0024 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45044.360.7164
21 Mapoly0039s0072 -44.720.7461
22 Mapoly0014s0129 [GO:0016021] integral to membrane; [GO:0006813] potassium ion transport; [GO:0005242] inward rectifier potassium channel activity; [PF01007] Inward rectifier potassium channel; [PTHR11767] INWARD RECTIFIER POTASSIUM CHANNEL45.920.7103
23 Mapoly0031s0128 [GO:0006096] glycolysis; [PF00274] Fructose-bisphosphate aldolase class-I; [K01623] fructose-bisphosphate aldolase, class I [EC:4.1.2.13]; [PTHR11627] FRUCTOSE-BISPHOSPHATE ALDOLASE; [GO:0004332] fructose-bisphosphate aldolase activity; [4.1.2.13] Fructose-bisphosphate aldolase.; [KOG1557] Fructose-biphosphate aldolase46.090.7524
24 Mapoly0153s0035 [PF01381] Helix-turn-helix; [GO:0043565] sequence-specific DNA binding; [K03627] putative transcription factor; [KOG3398] Transcription factor MBF1; [PTHR10245] ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1); [PF08523] Multiprotein bridging factor 146.960.7638
25 Mapoly0019s0081 -49.360.7399
26 Mapoly0008s0199 [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR22762] ALPHA-GLUCOSIDASE; [PF01055] Glycosyl hydrolases family 31; [PTHR22762:SF7] NEUTRAL ALPHA-GLUCOSIDASE AB PRECURSOR (GLUCOSIDASE II ALPHA SUBUNIT) (ALPHA GLUCOSIDASE 2); [KOG1065] Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 3149.960.7138
27 Mapoly0029s0059 [PF00132] Bacterial transferase hexapeptide (six repeats); [GO:0005737] cytoplasm; [PTHR23416:SF2] SERINE ACETYLTRANSFERASE; [2.3.1.30] Serine O-acetyltransferase.; [GO:0009001] serine O-acetyltransferase activity; [KOG4750] Serine O-acetyltransferase; [PTHR23416] SIALIC ACID SYNTHASE-RELATED; [GO:0006535] cysteine biosynthetic process from serine; [PF06426] Serine acetyltransferase, N-terminal; [K00640] serine O-acetyltransferase [EC:2.3.1.30]50.650.7431
28 Mapoly0188s0010 -51.190.7561
29 Mapoly0084s0075 [PF01823] MAC/Perforin domain52.660.7094
30 Mapoly0033s0162 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding52.990.7354
31 Mapoly0024s0003 -56.000.7104
32 Mapoly0201s0002 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45056.680.6646
33 Mapoly0082s0016 -59.880.6109
34 Mapoly0025s0025 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [K13463] coronatine-insensitive protein 1; [KOG1947] Leucine rich repeat proteins, some proteins contain F-box60.160.6992
35 Mapoly0090s0017 -62.210.7440
36 Mapoly0091s0004 [1.2.1.16] Succinate-semialdehyde dehydrogenase (NAD(P)(+)).; [K00135] succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]; [GO:0055114] oxidation-reduction process; [KOG2451] Aldehyde dehydrogenase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [PF00171] Aldehyde dehydrogenase family; [PTHR11699:SF49] SUCCINATE SEMIALDEHYDE DEHYDROGENASE62.210.6936
37 Mapoly0113s0032 [GO:0006396] RNA processing; [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF02170] PAZ domain; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0005515] protein binding; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [PF03368] Dicer dimerisation domain; [PF00270] DEAD/DEAH box helicase; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [GO:0003676] nucleic acid binding62.930.7111
38 Mapoly0153s0026 [PF00650] CRAL/TRIO domain; [PTHR10174] RETINALDEHYDE BINDING PROTEIN-RELATED; [KOG1471] Phosphatidylinositol transfer protein SEC14 and related proteins67.820.7363
39 Mapoly0148s0016 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG1790] 60s ribosomal protein L34; [GO:0005622] intracellular; [PTHR10759] 60S RIBOSOMAL PROTEIN L34; [K02915] large subunit ribosomal protein L34e; [GO:0006412] translation; [PF01199] Ribosomal protein L34e68.070.7473
40 Mapoly0141s0013 [PF00682] HMGL-like; [K01640] hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]; [PTHR10277:SF1] HYDROXYMETHYLGLUTARYL-COA LYASE; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [4.1.3.4] Hydroxymethylglutaryl-CoA lyase.; [KOG2368] Hydroxymethylglutaryl-CoA lyase; [GO:0003824] catalytic activity68.190.6640
41 Mapoly0109s0037 [KOG1327] Copine; [PF00168] C2 domain; [PTHR10857] COPINE; [PF07002] Copine; [GO:0005515] protein binding70.990.7206
42 Mapoly0045s0102 [GO:0003723] RNA binding; [PF01287] Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold; [GO:0003746] translation elongation factor activity; [GO:0045905] positive regulation of translational termination; [GO:0008612] peptidyl-lysine modification to hypusine; [GO:0006452] translational frameshifting; [K03263] translation initiation factor eIF-5A; [KOG3271] Translation initiation factor 5A (eIF-5A); [PTHR11673] TRANSLATION INITIATION FACTOR 5A-RELATED; [GO:0043022] ribosome binding; [GO:0045901] positive regulation of translational elongation74.070.7328
43 Mapoly0075s0073 [PF02713] Domain of unknown function DUF220; [PTHR31385] FAMILY NOT NAMED76.640.7386
44 Mapoly0107s0048 [KOG1303] Amino acid transporters; [PTHR22950:SF3] AUX1-LIKE AMINO ACID PERMEASE; [PF01490] Transmembrane amino acid transporter protein; [K13946] auxin influx carrier (AUX1 LAX family); [PTHR22950] AMINO ACID TRANSPORTER77.360.5938
45 Mapoly0001s0115 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF12796] Ankyrin repeats (3 copies)78.000.6377
46 Mapoly0064s0033 [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [PTHR11595] ELONGATION FACTOR 1-BETA; [K03232] elongation factor EF-1 beta subunit; [GO:0005853] eukaryotic translation elongation factor 1 complex; [KOG1668] Elongation factor 1 beta/delta chain; [PF00736] EF-1 guanine nucleotide exchange domain80.600.7352
47 Mapoly0013s0080 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE85.640.6492
48 Mapoly0012s0048 [PF05648] Peroxisomal biogenesis factor 11 (PEX11); [PTHR12652] PEROXISOMAL BIOGENESIS FACTOR 11; [KOG4186] Peroxisomal biogenesis protein (peroxin); [GO:0005779] integral to peroxisomal membrane; [GO:0016559] peroxisome fission85.920.7376
49 Mapoly0134s0027 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN86.990.6551
50 Mapoly0054s0038 [3.4.11.9] Xaa-Pro aminopeptidase.; [GO:0016787] hydrolase activity; [K01262] Xaa-Pro aminopeptidase [EC:3.4.11.9]; [PF00557] Metallopeptidase family M24; [KOG2413] Xaa-Pro aminopeptidase; [PF01321] Creatinase/Prolidase N-terminal domain; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)87.260.7115
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