Guide Gene

Gene ID
Mapoly0019s0086
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0019s0086 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 0.00 1.0000
1 Mapoly0001s0400 [GO:0016020] membrane; [PF00571] CBS domain; [GO:0006821] chloride transport; [PF00654] Voltage gated chloride channel; [GO:0055085] transmembrane transport; [GO:0005247] voltage-gated chloride channel activity; [KOG0475] Cl- channel CLC-3 and related proteins (CLC superfamily); [GO:0030554] adenyl nucleotide binding; [PTHR11689] CHLORIDE CHANNEL2.450.7737
2 Mapoly0001s0380 [K06962] ribosomal RNA assembly protein; [PF05991] YacP-like NYN domain3.320.7166
3 Mapoly0046s0035 -3.870.7537
4 Mapoly0015s0011 [GO:0005524] ATP binding; [PF03461] TRCF domain; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [PF02559] CarD-like/TRCF domain; [KOG0344] ATP-dependent RNA helicase; [GO:0003676] nucleic acid binding; [PTHR14025] FAMILY NOT NAMED11.750.7502
5 Mapoly0036s0110 [PF10296] Putative integral membrane protein conserved region (DUF2404); [KOG2238] Uncharacterized conserved protein TEX2, contains PH domain; [PTHR13466:SF0] SUBFAMILY NOT NAMED; [PTHR13466] TEX2 PROTEIN-RELATED13.040.7241
6 Mapoly0046s0011 [3.4.11.9] Xaa-Pro aminopeptidase.; [GO:0016787] hydrolase activity; [K01262] Xaa-Pro aminopeptidase [EC:3.4.11.9]; [PF00557] Metallopeptidase family M24; [KOG2413] Xaa-Pro aminopeptidase; [PF01321] Creatinase/Prolidase N-terminal domain; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)14.000.7400
7 Mapoly0049s0076 [PF01936] NYN domain16.000.7299
8 Mapoly0025s0135 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PTHR10436:SF53] SUBFAMILY NOT NAMED16.970.7663
9 Mapoly0043s0066 [PF01963] TraB family; [PTHR21530:SF1] gb def: Hypothetical protein At2g32340; [KOG2860] Uncharacterized conserved protein, contains TraB domain; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN19.600.7012
10 Mapoly0090s0080 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family20.120.7630
11 Mapoly2529s0001 [PF07645] Calcium-binding EGF domain; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [PF13947] Wall-associated receptor kinase galacturonan-binding; [GO:0030247] polysaccharide binding; [GO:0006468] protein phosphorylation; [GO:0005509] calcium ion binding; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE23.240.6773
12 Mapoly0140s0016 [GO:0005524] ATP binding; [KOG0061] Transporter, ABC superfamily (Breast cancer resistance protein); [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF00005] ABC transporter23.490.7616
13 Mapoly0038s0061 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family26.870.6985
14 Mapoly0009s0140 [K13950] para-aminobenzoate synthetase [EC:2.6.1.85]; [2.6.1.85] Aminodeoxychorismate synthase.; [PF04715] Anthranilate synthase component I, N terminal region; [GO:0009058] biosynthetic process; [PF00425] chorismate binding enzyme; [KOG1224] Para-aminobenzoate (PABA) synthase ABZ1; [GO:0016833] oxo-acid-lyase activity; [PTHR11236] AMINOBENZOATE/ANTHRANILATE SYNTHASE; [PF00117] Glutamine amidotransferase class-I38.370.5630
15 Mapoly0052s0014 -38.520.6837
16 Mapoly0056s0052 [PTHR31142] FAMILY NOT NAMED; [PF06454] Protein of unknown function (DUF1084)39.200.6833
17 Mapoly0022s0124 -39.500.6943
18 Mapoly0034s0014 [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA); [K03650] tRNA modification GTPase; [PF10396] GTP-binding protein TrmE N-terminus; [GO:0005525] GTP binding39.800.6912
19 Mapoly0035s0052 [KOG2303] Predicted NAD synthase, contains CN hydrolase domain; [GO:0006807] nitrogen compound metabolic process; [PTHR23090] NH(3)/GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE; [PF00795] Carbon-nitrogen hydrolase; [K01950] NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]; [GO:0016810] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; [PF02540] NAD synthase; [6.3.5.1] NAD(+) synthase (glutamine-hydrolyzing).41.740.7084
20 Mapoly0065s0015 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF02272] DHHA1 domain; [PTHR11777] ALANYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [PF01411] tRNA synthetases class II (A); [KOG0188] Alanyl-tRNA synthetase; [GO:0003676] nucleic acid binding; [K01872] alanyl-tRNA synthetase [EC:6.1.1.7]; [GO:0006419] alanyl-tRNA aminoacylation; [6.1.1.7] Alanine--tRNA ligase.; [GO:0004813] alanine-tRNA ligase activity43.310.7043
21 Mapoly0064s0016 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED47.430.7278
22 Mapoly0138s0035 [PTHR11851] METALLOPROTEASE48.870.7144
23 Mapoly0072s0042 [PF12937] F-box-like; [GO:0005515] protein binding53.830.6726
24 Mapoly0098s0045 -53.830.6228
25 Mapoly0159s0012 [PTHR22749] RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE; [GO:0009231] riboflavin biosynthetic process; [GO:0008531] riboflavin kinase activity; [PF01687] Riboflavin kinase; [KOG3110] Riboflavin kinase55.860.6863
26 Mapoly0005s0071 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE58.480.6437
27 Mapoly0087s0022 [PTHR32133] FAMILY NOT NAMED; [PF12937] F-box-like; [GO:0005515] protein binding58.860.5943
28 Mapoly0185s0006 [PTHR13414] HUEL-CATION TRANSPORTER; [PF01545] Cation efflux family; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity59.400.5587
29 Mapoly0029s0044 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED59.700.6582
30 Mapoly0200s0003 [PF13614] AAA domain; [PTHR23264] NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED; [PTHR23264:SF4] MRP-RELATED NUCLEOTIDE-BINDING PROTEIN; [PF10609] ParA/MinD ATPase like; [K03593] ATP-binding protein involved in chromosome partitioning; [KOG3022] Predicted ATPase, nucleotide-binding61.160.6571
31 Mapoly0014s0147 [PTHR10072] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN61.430.7011
32 Mapoly0020s0110 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family66.810.6997
33 Mapoly0093s0005 [GO:0005515] protein binding; [PF13414] TPR repeat; [GO:0043531] ADP binding; [PF00515] Tetratricopeptide repeat; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING; [PF00931] NB-ARC domain; [PF13646] HEAT repeats67.190.6714
34 Mapoly0105s0016 [GO:0005524] ATP binding; [KOG1051] Chaperone HSP104 and related ATP-dependent Clp proteases; [PF07724] AAA domain (Cdc48 subfamily); [K03695] ATP-dependent Clp protease ATP-binding subunit ClpB; [PF02861] Clp amino terminal domain; [PF10431] C-terminal, D2-small domain, of ClpB protein; [PTHR11638] ATP-DEPENDENT CLP PROTEASE; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0019538] protein metabolic process70.000.6664
35 Mapoly0114s0029 [GO:0016567] protein ubiquitination; [GO:0004842] ubiquitin-protein ligase activity; [PF04564] U-box domain71.360.6577
36 Mapoly0010s0074 -72.660.6669
37 Mapoly0104s0040 -76.730.6816
38 Mapoly0088s0066 [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase77.140.5221
39 Mapoly0023s0082 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family80.400.6588
40 Mapoly0095s0004 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding85.120.6563
41 Mapoly0012s0091 -87.360.6377
42 Mapoly0036s0017 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PF13041] PPR repeat family; [GO:0005634] nucleus; [PTHR12683:SF10] PREDICTED PROTEIN; [PTHR12683] FAMILY NOT NAMED; [GO:0007049] cell cycle88.170.6677
43 Mapoly0112s0009 [PF13513] HEAT-like repeat; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING89.200.6659
44 Mapoly0041s0109 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family89.330.7036
45 Mapoly0036s0084 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0387] Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [PF00271] Helicase conserved C-terminal domain; [PTHR10799:SF49] DNA EXCISION REPAIR PROTEIN ERCC-6 (COCKAYNE SYNDROME PROTEIN CSB); [K10841] DNA excision repair protein ERCC-691.040.6625
46 Mapoly0008s0004 [PTHR11601] CYSTEINE DESULFURYLASE; [GO:0008152] metabolic process; [PF00266] Aminotransferase class-V94.370.6605
47 Mapoly0015s0143 [PF12204] Domain of unknown function (DUF3598)95.900.6747
48 Mapoly0078s0043 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family96.120.6932
49 Mapoly0086s0079 -97.950.6513
50 Mapoly0015s0012 [PTHR22093] LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER 198.750.6886
Showing 1 to 50 of 200 records
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