Guide Gene

Gene ID
Mapoly0015s0076
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF07719] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [PF13424] Tetratricopeptide repeat; [PTHR19959] KINESIN LIGHT CHAIN

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0015s0076 [PF07719] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [PF13424] Tetratricopeptide repeat; [PTHR19959] KINESIN LIGHT CHAIN 0.00 1.0000
1 Mapoly0067s0028 [GO:0051087] chaperone binding; [PTHR21237] GRPE PROTEIN; [PF01025] GrpE; [GO:0006457] protein folding; [GO:0042803] protein homodimerization activity; [K03687] molecular chaperone GrpE; [KOG3003] Molecular chaperone of the GrpE family; [GO:0000774] adenyl-nucleotide exchange factor activity1.410.8354
2 Mapoly0032s0093 [PF02096] 60Kd inner membrane protein; [KOG1239] Inner membrane protein translocase involved in respiratory chain assembly; [K03217] preprotein translocase subunit YidC; [GO:0016021] integral to membrane; [PTHR12428] OXA1; [GO:0051205] protein insertion into membrane3.320.7960
3 Mapoly0141s0005 [GO:0031072] heat shock protein binding; [KOG0715] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding3.740.7849
4 Mapoly0070s0010 [PTHR10721] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44; [PF04280] Tim44-like domain; [KOG2580] Mitochondrial import inner membrane translocase, subunit TIM443.870.8114
5 Mapoly0046s0027 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT4.000.7839
6 Mapoly0029s0089 [PTHR12184] BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG (ZIC3-BINDING PROTEIN); [PF03981] Ubiquinol-cytochrome C chaperone; [PTHR12184:SF1] ZIC3 BINDING PROTEIN-RELATED4.360.7765
7 Mapoly0028s0021 -4.470.8443
8 Mapoly0085s0044 [PTHR13182] ZINC FINGER PROTEIN 622; [PF12171] Zinc-finger double-stranded RNA-binding; [PF12756] C2H2 type zinc-finger (2 copies); [KOG2785] C2H2-type Zn-finger protein11.830.7641
9 Mapoly0036s0031 [GO:0003723] RNA binding; [K02945] small subunit ribosomal protein S1; [PF00575] S1 RNA binding domain; [PTHR15838] FAMILY NOT NAMED12.000.7997
10 Mapoly0033s0014 [PF08772] Nin one binding (NOB1) Zn-ribbon like; [PTHR12814] RNA-BINDING PROTEIN NOB1; [K11883] RNA-binding protein NOB112.610.8186
11 Mapoly0016s0061 [KOG1605] TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation); [PF03031] NLI interacting factor-like phosphatase; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [GO:0005515] protein binding; [GO:0015031] protein transport; [PTHR12210:SF3] TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 50-RELATED; [PTHR12210] NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED; [GO:0005743] mitochondrial inner membrane13.490.8081
12 Mapoly0003s0227 [GO:0042254] ribosome biogenesis; [KOG2917] Predicted exosome subunit; [PTHR10927] RIBOSOME MATURATION PROTEIN SBDS; [PF09377] SBDS protein C-terminal domain; [PTHR10927:SF1] UNCHARACTERIZED; [K14574] ribosome maturation protein SDO1; [PF01172] Shwachman-Bodian-Diamond syndrome (SBDS) protein15.490.7962
13 Mapoly0007s0098 [GO:0005524] ATP binding; [KOG0742] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23075] PUTATIVE ATP-ASE; [PF12037] Domain of unknown function (DUF3523)15.680.8085
14 Mapoly0144s0016 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [PTHR10352] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G; [PF12353] Eukaryotic translation initiation factor 3 subunit G; [K03248] translation initiation factor eIF-3 subunit 4; [GO:0003676] nucleic acid binding; [KOG0122] Translation initiation factor 3, subunit g (eIF-3g); [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)16.730.7355
15 Mapoly0043s0003 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.1] Dimethylallyltranstransferase.; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [K14066] geranyl diphosphate synthase [EC:2.5.1.1]16.880.7340
16 Mapoly0055s0055 [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [KOG0722] Molecular chaperone (DnaJ superfamily)17.320.7314
17 Mapoly0144s0013 [KOG2434] RNA polymerase I transcription factor; [PF05327] RNA polymerase I specific transcription initiation factor RRN3; [PTHR12790] TRANSCRIPTION INITIATION FACTOR IA (RRN3)18.000.7817
18 Mapoly0013s0060 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [PF00012] Hsp70 protein; [KOG0102] Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily18.550.8140
19 Mapoly0079s0035 [PTHR21531] LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED; [KOG2637] Uncharacterized conserved protein18.760.7720
20 Mapoly0001s0085 [PTHR19852] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG0282] mRNA splicing factor; [K12816] pre-mRNA-processing factor 17; [PF00400] WD domain, G-beta repeat23.640.7887
21 Mapoly0003s0021 [GO:0017004] cytochrome complex assembly; [GO:0005886] plasma membrane; [GO:0017003] protein-heme linkage; [PF03100] CcmE24.740.7015
22 Mapoly0002s0303 [GO:0005524] ATP binding; [PTHR10046:SF23] LON PROTEASE HOMOLOG, MITOCHONDRIAL; [3.4.21.-] Serine endopeptidases.; [K08675] Lon-like ATP-dependent protease [EC:3.4.21.-]; [PF05362] Lon protease (S16) C-terminal proteolytic domain; [GO:0004176] ATP-dependent peptidase activity; [KOG2004] Mitochondrial ATP-dependent protease PIM1/LON; [GO:0004252] serine-type endopeptidase activity; [PF00004] ATPase family associated with various cellular activities (AAA); [PF02190] ATP-dependent protease La (LON) domain; [GO:0030163] protein catabolic process; [PTHR10046] ATP DEPENDENT LON PROTEASE FAMILY MEMBER; [GO:0006508] proteolysis25.240.7436
23 Mapoly0065s0028 [GO:0005840] ribosome; [PF00312] Ribosomal protein S15; [PTHR23321] RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation25.460.7895
24 Mapoly0007s0267 -25.500.7262
25 Mapoly0121s0027 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF50] SUBFAMILY NOT NAMED; [KOG0767] Mitochondrial phosphate carrier protein26.120.7290
26 Mapoly0072s0009 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family27.660.7993
27 Mapoly0074s0044 -28.250.6833
28 Mapoly0114s0007 [KOG0724] Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09522] DnaJ homolog subfamily C member 229.390.7438
29 Mapoly0004s0190 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [KOG2602] Predicted cell surface protein homologous to bacterial outer membrane proteins; [PF01103] Surface antigen30.980.7172
30 Mapoly0011s0012 [GO:0016020] membrane; [KOG2620] Prohibitins and stomatins of the PID superfamily; [PTHR10264] BAND 7 PROTEIN-RELATED; [PTHR10264:SF27] UNCHARACTERIZED; [PF01145] SPFH domain / Band 7 family32.760.7590
31 Mapoly0002s0333 [1.8.1.7] Glutathione-disulfide reductase.; [GO:0050660] flavin adenine dinucleotide binding; [KOG0405] Pyridine nucleotide-disulphide oxidoreductase; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [K00383] glutathione reductase (NADPH) [EC:1.8.1.7]; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [PF07992] Pyridine nucleotide-disulphide oxidoreductase32.860.6821
32 Mapoly0028s0095 [GO:0005744] mitochondrial inner membrane presequence translocase complex; [PTHR10485] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17; [PTHR10485:SF0] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17; [KOG1652] Mitochondrial import inner membrane translocase, subunit TIM17; [GO:0006886] intracellular protein transport; [PF02466] Tim17/Tim22/Tim23/Pmp24 family; [GO:0015450] P-P-bond-hydrolysis-driven protein transmembrane transporter activity32.860.7592
33 Mapoly0071s0060 -33.590.7447
34 Mapoly0014s0066 [KOG2271] Nuclear pore complex component (sc Nup85); [K14304] nuclear pore complex protein Nup85; [PF07575] Nup85 Nucleoporin; [PTHR13373] FROUNT PROTEIN-RELATED34.790.7362
35 Mapoly0156s0015 [GO:0005524] ATP binding; [KOG0361] Chaperonin complex component, TCP-1 eta subunit (CCT7); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [PTHR11353:SF22] CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ETA SUBUNIT, TCPH; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding35.410.7618
36 Mapoly0023s0025 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF14497] Glutathione S-transferase, C-terminal domain; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF03950] tRNA synthetases class I (E and Q), anti-codon binding domain; [KOG1147] Glutamyl-tRNA synthetase; [6.1.1.17] Glutamate--tRNA ligase.; [PTHR10119:SF15] GLUTAMINYL-TRNA SYNTHETASE; [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [GO:0006418] tRNA aminoacylation for protein translation; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]; [GO:0004812] aminoacyl-tRNA ligase activity37.340.7823
37 Mapoly0029s0132 [K02355] elongation factor EF-G [EC:3.6.5.3]; [PF14492] Elongation Factor G, domain II; [3.6.5.3] Protein-synthesizing GTPase.; [PF00009] Elongation factor Tu GTP binding domain; [KOG0465] Mitochondrial elongation factor; [PF00679] Elongation factor G C-terminus; [GO:0003924] GTPase activity; [PTHR23115:SF66] SUBFAMILY NOT NAMED; [PTHR23115] TRANSLATION FACTOR; [PF03764] Elongation factor G, domain IV; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 238.500.7192
38 Mapoly0025s0013 [GO:0010468] regulation of gene expression; [GO:0005777] peroxisome; [PTHR14379] LIMKAIN B (LKAP); [PF01936] NYN domain; [PF12872] OST-HTH/LOTUS domain42.630.7681
39 Mapoly0024s0015 [GO:0005524] ATP binding; [K03655] ATP-dependent DNA helicase RecG [EC:3.6.4.12]; [3.6.4.12] DNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0344] ATP-dependent RNA helicase; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF50] SUBFAMILY NOT NAMED43.050.6971
40 Mapoly0070s0045 [PF00483] Nucleotidyl transferase; [K03241] translation initiation factor eIF-2B gamma subunit; [GO:0009058] biosynthetic process; [PTHR22572] SUGAR-1-PHOSPHATE GUANYL TRANSFERASE; [KOG1462] Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1); [GO:0016779] nucleotidyltransferase activity; [PTHR22572:SF8] TRANSLATION INITIATION FACTOR EIF-2B GAMMA SUBUNIT43.120.6792
41 Mapoly0061s0019 [PF12937] F-box-like; [PTHR12480:SF8] TRANSCRIPTION FACTOR JUMONJI, JMJC DOMAIN-CONTAINING PROTEIN; [GO:0005515] protein binding; [PTHR12480] PHOSPHATIDYLSERINE RECEPTOR; [KOG2130] Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain; [PF13621] Cupin-like domain44.000.6888
42 Mapoly0006s0240 [PF13343] Bacterial extracellular solute-binding protein; [PTHR30222] SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN44.500.7261
43 Mapoly0182s0008 [PF05450] Nicastrin; [GO:0016485] protein processing; [GO:0016021] integral to membrane; [KOG2657] Transmembrane glycoprotein nicastrin; [K06171] nicastrin; [PTHR21092:SF0] SUBFAMILY NOT NAMED; [PTHR21092] NICASTRIN45.830.6648
44 Mapoly0093s0033 [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [PTHR22939:SF1] SERINE ENDOPEPTIDASE DEGP2; [PF13365] Trypsin-like peptidase domain48.370.7842
45 Mapoly0023s0103 [KOG2792] Putative cytochrome C oxidase assembly protein; [PF02630] SCO1/SenC; [PTHR12151] SCO1/SENC; [K07152] dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119]; [PTHR12151:SF5] SENC49.820.7615
46 Mapoly0001s0055 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family50.600.7762
47 Mapoly0052s0107 [GO:0009116] nucleoside metabolic process; [PF00215] Orotidine 5'-phosphate decarboxylase / HUMPS family; [KOG1377] Uridine 5'- monophosphate synthase/orotate phosphoribosyltransferase; [K13421] uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]; [PTHR19278] FAMILY NOT NAMED; [4.1.1.23] Orotidine-5'-phosphate decarboxylase.; [GO:0004590] orotidine-5'-phosphate decarboxylase activity; [PTHR19278:SF9] SUBFAMILY NOT NAMED; [2.4.2.10] Orotate phosphoribosyltransferase.; [PF00156] Phosphoribosyl transferase domain; [GO:0006207] 'de novo' pyrimidine nucleobase biosynthetic process50.790.6501
48 Mapoly0081s0022 [PF04068] Possible Fer4-like domain in RNase L inhibitor, RLI; [GO:0005524] ATP binding; [PF00037] 4Fe-4S binding domain; [GO:0016887] ATPase activity; [K06174] ATP-binding cassette, sub-family E, member 1; [KOG0063] RNAse L inhibitor, ABC superfamily; [GO:0051536] iron-sulfur cluster binding; [PTHR19248] ATP-BINDING TRANSPORT PROTEIN-RELATED; [PF00005] ABC transporter51.500.7655
49 Mapoly0070s0050 [GO:0004843] ubiquitin-specific protease activity; [PTHR10589] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; [K05610] ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12]; [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG2778] Ubiquitin C-terminal hydrolase; [GO:0005622] intracellular; [3.4.19.12] Ubiquitinyl hydrolase 1.; [PTHR10589:SF16] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L5; [PF01088] Ubiquitin carboxyl-terminal hydrolase, family 152.960.7396
50 Mapoly0102s0020 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [KOG0062] ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b; [K06158] ATP-binding cassette, sub-family F, member 3; [PF12848] ABC transporter; [PF00005] ABC transporter53.670.7619
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