Guide Gene

Gene ID
Mapoly0012s0090
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [KOG0956] PHD finger protein AF10; [PF05920] Homeobox KN domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0012s0090 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [KOG0956] PHD finger protein AF10; [PF05920] Homeobox KN domain 0.00 1.0000
1 Mapoly0070s0024 -10.200.6509
2 Mapoly0041s0135 [PF01391] Collagen triple helix repeat (20 copies); [PTHR24023] FAMILY NOT NAMED10.490.5502
3 Mapoly0009s0088 [PF14368] Probable lipid transfer11.660.6391
4 Mapoly0093s0028 [GO:0003677] DNA binding; [PTHR11850] HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; [GO:0006355] regulation of transcription, DNA-dependent; [PF05920] Homeobox KN domain18.970.6256
5 Mapoly0066s0061 -25.140.5010
6 Mapoly0046s0117 -28.280.6177
7 Mapoly0003s0229 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain28.640.5838
8 Mapoly0064s0025 -28.910.6213
9 Mapoly0073s0048 -30.400.5513
10 Mapoly0013s0034 [PTHR11746] O-METHYLTRANSFERASE; [K05279] flavonol 3-O-methyltransferase [EC:2.1.1.76]; [GO:0046983] protein dimerization activity; [2.1.1.76] Quercetin 3-O-methyltransferase.; [GO:0008171] O-methyltransferase activity; [KOG3178] Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases; [PF08100] Dimerisation domain; [PF00891] O-methyltransferase34.060.4524
11 Mapoly0151s0032 [KOG4172] Predicted E3 ubiquitin ligase; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR12313] RNF535.500.5985
12 Mapoly0002s0091 [PF03357] Snf7; [KOG3230] Vacuolar assembly/sorting protein DID4; [PTHR10476] CHARGED MULTIVESICULAR BODY PROTEIN; [GO:0015031] protein transport; [PTHR10476:SF4] CHARGED MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING PROTEIN 2A)(CHMP2A)(VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 2-1)(VPS2-1)(HVPS2-1)(PUTATIVE BREAST ADENOCARCINOMA MARKER BC-2)55.740.5762
13 Mapoly0115s0036 [GO:0005524] ATP binding; [KOG0055] Multidrug/pheromone exporter, ABC superfamily; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter58.450.5879
14 Mapoly0052s0009 -59.400.5723
15 Mapoly0075s0068 -62.060.5793
16 Mapoly0046s0029 -65.520.5844
17 Mapoly0087s0002 [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00856] SET domain; [PF00515] Tetratricopeptide repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN66.410.5099
18 Mapoly0032s0048 [KOG2106] Uncharacterized conserved protein, contains HELP and WD40 domains; [GO:0005515] protein binding; [PTHR32215] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat70.060.6041
19 Mapoly0007s0155 [PF06405] Red chlorophyll catabolite reductase (RCC reductase); [K13545] red chlorophyll catabolite reductase [EC:1.3.1.80]; [1.3.1.80] Red chlorophyll catabolite reductase.70.290.5004
20 Mapoly0025s0061 -70.430.5651
21 Mapoly0046s0019 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [KOG3396] Glucosamine-phosphate N-acetyltransferase; [PTHR13355] GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE; [K00621] glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4]; [2.3.1.4] Glucosamine-phosphate N-acetyltransferase.75.580.5617
22 Mapoly0022s0126 [PTHR23314] SPERM-ASSOCIATED ANTIGEN 6 (ARMADILLO REPEAT-CONTAINING); [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha83.460.5578
23 Mapoly0020s0059 [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [PTHR23050] CALCIUM BINDING PROTEIN; [PF13833] EF-hand domain pair; [PTHR23050:SF90] PROBABLE CALCIUM-BINDING PROTEIN CML9; [GO:0005509] calcium ion binding89.140.5397
24 Mapoly0014s0185 [GO:0016020] membrane; [GO:0055085] transmembrane transport; [KOG4629] Predicted mechanosensitive ion channel; [PTHR31618] FAMILY NOT NAMED; [PF00924] Mechanosensitive ion channel93.990.5336
25 Mapoly0023s0055 -95.180.5677
26 Mapoly0090s0019 -108.310.5419
27 Mapoly0023s0081 [GO:0003677] DNA binding; [PF03791] KNOX2 domain; [PF03790] KNOX1 domain; [GO:0005634] nucleus111.140.5804
28 Mapoly0093s0036 [PTHR21622] COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4; [PTHR21622:SF0] SUBFAMILY NOT NAMED; [KOG4149] Uncharacterized conserved protein111.530.5553
29 Mapoly0033s0102 -115.000.5568
30 Mapoly0003s0280 [3.2.2.21] DNA-3-methyladenine glycosylase II.; [GO:0003677] DNA binding; [GO:0006284] base-excision repair; [PF02245] Methylpurine-DNA glycosylase (MPG); [K03652] DNA-3-methyladenine glycosylase [EC:3.2.2.21]; [PTHR10429:SF0] DNA-3-METHYLADENINE GLYCOSYLASE; [PTHR10429] DNA-3-METHYLADENINE GLYCOSYLASE; [GO:0003905] alkylbase DNA N-glycosylase activity; [KOG4486] 3-methyladenine DNA glycosylase116.190.5443
31 Mapoly0005s0270 [PTHR10588:SF32] LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48; [PTHR10588] FAMILY NOT NAMED; [KOG1644] U2-associated snRNP A' protein; [PF14580] Leucine-rich repeat120.300.5451
32 Mapoly0095s0039 -123.500.5257
33 Mapoly0030s0010 -130.630.5419
34 Mapoly0023s0069 [GO:0006308] DNA catabolic process; [PF02265] S1/P1 Nuclease; [GO:0003676] nucleic acid binding; [GO:0004519] endonuclease activity134.790.5273
35 Mapoly0011s0186 -139.000.5261
36 Mapoly0022s0169 [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12780] P-loop containing dynein motor region D4; [K10408] dynein heavy chain, axonemal; [PF12775] P-loop containing dynein motor region D3; [GO:0005858] axonemal dynein complex; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF08393] Dynein heavy chain, N-terminal region 2; [PF12781] ATP-binding dynein motor region D5; [GO:0003341] cilium movement; [PTHR10676:SF138] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [GO:0003777] microtubule motor activity142.110.5318
37 Mapoly0077s0010 [GO:0005515] protein binding; [PTHR13720] WD-40 REPEAT PROTEIN; [KOG0279] G protein beta subunit-like protein; [PF00400] WD domain, G-beta repeat148.350.5254
38 Mapoly0037s0031 [PTHR21178] FAMILY NOT NAMED; [PTHR21178:SF8] SUBFAMILY NOT NAMED148.710.5272
39 Mapoly0040s0110 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG4280] Kinesin-like protein; [GO:0005871] kinesin complex; [K10397] kinesin family member 6/9; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity; [PTHR24115:SF191] SUBFAMILY NOT NAMED149.570.5314
40 Mapoly0139s0006 [PF01190] Pollen proteins Ole e I like151.900.5032
41 Mapoly0042s0045 [PTHR21139] TRIOSEPHOSPHATE ISOMERASE; [PTHR21139:SF1] TRIOSEPHOSPHATE ISOMERASE; [KOG1643] Triosephosphate isomerase; [5.3.1.1] Triose-phosphate isomerase.; [GO:0008152] metabolic process; [GO:0004807] triose-phosphate isomerase activity; [PF00121] Triosephosphate isomerase; [K01803] triosephosphate isomerase (TIM) [EC:5.3.1.1]152.630.5336
42 Mapoly0029s0026 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0659] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7; [PTHR24056] CELL DIVISION PROTEIN KINASE154.760.5146
43 Mapoly0064s0008 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding155.430.4858
44 Mapoly0003s0227 [GO:0042254] ribosome biogenesis; [KOG2917] Predicted exosome subunit; [PTHR10927] RIBOSOME MATURATION PROTEIN SBDS; [PF09377] SBDS protein C-terminal domain; [PTHR10927:SF1] UNCHARACTERIZED; [K14574] ribosome maturation protein SDO1; [PF01172] Shwachman-Bodian-Diamond syndrome (SBDS) protein156.800.5489
45 Mapoly0008s0146 -159.950.5136
46 Mapoly0095s0010 [GO:0000287] magnesium ion binding; [4.1.1.1] Pyruvate decarboxylase.; [PF02775] Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; [PTHR18968] THIAMINE PYROPHOSPHATE ENZYMES; [GO:0030976] thiamine pyrophosphate binding; [K01568] pyruvate decarboxylase [EC:4.1.1.1]; [PF00205] Thiamine pyrophosphate enzyme, central domain; [GO:0003824] catalytic activity; [KOG1184] Thiamine pyrophosphate-requiring enzyme; [PF02776] Thiamine pyrophosphate enzyme, N-terminal TPP binding domain164.330.5231
47 Mapoly0013s0027 [KOG4090] Uncharacterized conserved protein; [PTHR24023:SF95] SUBFAMILY NOT NAMED; [PTHR24023] FAMILY NOT NAMED166.130.5103
48 Mapoly0101s0027 [GO:0005515] protein binding; [PF14555] UBA-like domain; [PF00789] UBX domain; [PF08059] SEP domain; [KOG2086] Protein tyrosine phosphatase SHP1/Cofactor for p97 ATPase-mediated vesicle membrane fusion; [PTHR23333] UBX DOMAIN CONTAINING PROTEIN166.290.5264
49 Mapoly0009s0024 [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)170.800.4923
50 Mapoly0095s0065 [PTHR31642] FAMILY NOT NAMED; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF02458] Transferase family172.650.5153
Showing 1 to 50 of 200 records
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