Guide Gene

Gene ID
Mapoly0011s0165
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0011s0165 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE 0.00 1.0000
1 Mapoly0030s0080 [PF10604] Polyketide cyclase / dehydrase and lipid transport; [K14496] abscisic acid receptor PYR/PYL family; [PTHR31213] FAMILY NOT NAMED2.830.6693
2 Mapoly0015s0125 [PF11891] Domain of unknown function (DUF3411); [PTHR31620] FAMILY NOT NAMED7.420.7151
3 Mapoly0045s0140 [PTHR21004] SERINE PROTEASE-RELATED; [PTHR21004:SF0] SUBFAMILY NOT NAMED; [PF13365] Trypsin-like peptidase domain19.520.5148
4 Mapoly0218s0009 [KOG1197] Predicted quinone oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [GO:0016491] oxidoreductase activity; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED21.560.6156
5 Mapoly0081s0077 [PTHR31559] FAMILY NOT NAMED; [GO:0006543] glutamine catabolic process; [KOG3210] Imidazoleglycerol-phosphate synthase subunit H-like; [PF01174] SNO glutamine amidotransferase family; [2.6.-.-] Transferring nitrogenous groups.; [K08681] glutamine amidotransferase [EC:2.6.-.-]; [GO:0042823] pyridoxal phosphate biosynthetic process; [GO:0016740] transferase activity22.650.6706
6 Mapoly0124s0034 [GO:0004222] metalloendopeptidase activity; [K07042] probable rRNA maturation factor; [PTHR10000] PHOSPHOSERINE PHOSPHATASE; [GO:0006364] rRNA processing; [PF08282] haloacid dehalogenase-like hydrolase; [PF02130] Uncharacterized protein family UPF005424.490.6774
7 Mapoly0011s0016 -26.080.6134
8 Mapoly0025s0037 [KOG1603] Copper chaperone; [GO:0030001] metal ion transport; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding30.200.5214
9 Mapoly0035s0120 [PTHR10314:SF5] THREONINE SYNTHASE; [PF00291] Pyridoxal-phosphate dependent enzyme; [4.2.3.1] Threonine synthase.; [K01733] threonine synthase [EC:4.2.3.1]; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE30.410.6662
10 Mapoly0029s0020 [KOG1468] Predicted translation initiation factor related to eIF-2B alpha/beta/delta subunits (CIG2/IDI2); [GO:0044237] cellular metabolic process; [PTHR10233] TRANSLATION INITIATION FACTOR EIF-2B; [PF01636] Phosphotransferase enzyme family; [PF01008] Initiation factor 2 subunit family; [PTHR10233:SF6] METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE (TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA/BETA/DELTA-LIKE PROTEIN)30.510.6064
11 Mapoly0035s0150 [PTHR21262] GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; [PF13328] HD domain; [PF04607] Region found in RelA / SpoT proteins; [GO:0015969] guanosine tetraphosphate metabolic process30.590.6443
12 Mapoly0011s0034 [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [PTHR32468] FAMILY NOT NAMED; [PF00999] Sodium/hydrogen exchanger family33.500.5827
13 Mapoly0010s0197 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P450; [PTHR24286] FAMILY NOT NAMED33.630.5855
14 Mapoly0160s0025 -35.330.5409
15 Mapoly0027s0134 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity35.890.5767
16 Mapoly0068s0042 [1.4.4.2] Glycine dehydrogenase (decarboxylating).; [GO:0055114] oxidation-reduction process; [K00281] glycine dehydrogenase [EC:1.4.4.2]; [KOG2040] Glycine dehydrogenase (decarboxylating); [GO:0006546] glycine catabolic process; [GO:0004375] glycine dehydrogenase (decarboxylating) activity; [PF02347] Glycine cleavage system P-protein; [PTHR11773] GLYCINE DEHYDROGENASE50.680.6480
17 Mapoly0023s0027 [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [PF04898] Glutamate synthase central domain; [GO:0006537] glutamate biosynthetic process; [GO:0055114] oxidation-reduction process; [GO:0006807] nitrogen compound metabolic process; [GO:0015930] glutamate synthase activity; [1.4.7.1] Glutamate synthase (ferredoxin).; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF01645] Conserved region in glutamate synthase; [KOG0399] Glutamate synthase; [PF00310] Glutamine amidotransferases class-II; [GO:0016638] oxidoreductase activity, acting on the CH-NH2 group of donors; [K00284] glutamate synthase (ferredoxin) [EC:1.4.7.1]; [PF01493] GXGXG motif54.390.6658
18 Mapoly0052s0062 [PF13738] Pyridine nucleotide-disulphide oxidoreductase; [PTHR23023] DIMETHYLANILINE MONOOXYGENASE59.400.6573
19 Mapoly0142s0006 [2.7.7.4] Sulfate adenylyltransferase.; [KOG0636] ATP sulfurylase (sulfate adenylyltransferase); [PTHR11055] ADENYLSULFATE KINASE/SULFATE ADENYLTRANSFERASE; [2.7.1.25] Adenylyl-sulfate kinase.; [PF01747] ATP-sulfurylase; [PF14306] PUA-like domain; [GO:0004781] sulfate adenylyltransferase (ATP) activity; [K13811] 3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25]61.750.5840
20 Mapoly0007s0271 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain67.450.4488
21 Mapoly0080s0059 -69.970.5756
22 Mapoly0094s0025 [GO:0004871] signal transducer activity; [PF13188] PAS domain; [GO:0007165] signal transduction70.590.5043
23 Mapoly0141s0024 [GO:0005524] ATP binding; [K09773] hypothetical protein; [PTHR31756] FAMILY NOT NAMED; [PF03618] Kinase/pyrophosphorylase; [GO:0016772] transferase activity, transferring phosphorus-containing groups71.300.6199
24 Mapoly0174s0014 [PTHR11772] ASPARAGINE SYNTHETASE; [KOG0571] Asparagine synthase (glutamine-hydrolyzing); [K01953] asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]; [PTHR11772:SF2] gb def: unknown protein [mesorhizobium loti]; [GO:0008152] metabolic process; [GO:0006529] asparagine biosynthetic process; [PF13537] Glutamine amidotransferase domain; [PF00733] Asparagine synthase; [6.3.5.4] Asparagine synthase (glutamine-hydrolyzing).; [GO:0004066] asparagine synthase (glutamine-hydrolyzing) activity72.460.5897
25 Mapoly0015s0122 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [PTHR11680:SF1] SERINE HYDROXYMETHYLTRANSFERASE; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE73.420.6442
26 Mapoly0003s0157 [GO:0055114] oxidation-reduction process; [PTHR31803] FAMILY NOT NAMED; [PF01786] Alternative oxidase; [GO:0009916] alternative oxidase activity74.010.5367
27 Mapoly0014s0057 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily76.050.6315
28 Mapoly0010s0186 -81.730.5806
29 Mapoly0047s0028 [GO:0050660] flavin adenine dinucleotide binding; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [1.8.1.4] Dihydrolipoyl dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [K00382] dihydrolipoamide dehydrogenase [EC:1.8.1.4]; [GO:0016491] oxidoreductase activity; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [KOG1335] Dihydrolipoamide dehydrogenase; [PTHR22912:SF20] DIHYDROLIPOAMIDE DEHYDROGENASE-RELATED; [PF07992] Pyridine nucleotide-disulphide oxidoreductase82.120.6319
30 Mapoly0078s0051 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily85.360.5950
31 Mapoly0051s0030 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0758] Mitochondrial carnitine-acylcarnitine carrier protein; [K03454] mitochondrial carrier protein, MC family85.800.6088
32 Mapoly0169s0028 [KOG1256] Long-chain acyl-CoA synthetases (AMP-forming); [K01897] long-chain acyl-CoA synthetase [EC:6.2.1.3]; [PF00501] AMP-binding enzyme; [6.2.1.3] Long-chain-fatty-acid--CoA ligase.; [GO:0008152] metabolic process; [PTHR24096:SF51] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED87.860.5316
33 Mapoly0151s0023 [GO:0004379] glycylpeptide N-tetradecanoyltransferase activity; [KOG2779] N-myristoyl transferase; [K00671] glycylpeptide N-tetradecanoyltransferase [EC:2.3.1.97]; [GO:0006499] N-terminal protein myristoylation; [PF02799] Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; [2.3.1.97] Glycylpeptide N-tetradecanoyltransferase.; [PF01233] Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; [PTHR11377] N-MYRISTOYL TRANSFERASE88.920.5520
34 Mapoly0041s0090 [2.6.1.2] Alanine transaminase.; [K00814] alanine transaminase [EC:2.6.1.2]; [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [PF00155] Aminotransferase class I and II; [KOG0258] Alanine aminotransferase; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED89.020.6157
35 Mapoly0068s0011 [PTHR11614] PHOSPHOLIPASE-RELATED; [KOG1455] Lysophospholipase; [PF12697] Alpha/beta hydrolase family93.910.5101
36 Mapoly0173s0013 [KOG1662] Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5; [PTHR11910:SF1] ATP SYNTHASE DELTA CHAIN; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [PTHR11910] ATP SYNTHASE DELTA CHAIN; [GO:0015986] ATP synthesis coupled proton transport; [PF00213] ATP synthase delta (OSCP) subunit112.090.5823
37 Mapoly0129s0024 [GO:0005737] cytoplasm; [PF08669] Glycine cleavage T-protein C-terminal barrel domain; [GO:0004047] aminomethyltransferase activity; [PTHR13847:SF5] AMINOMETHYLTRANSFERASE; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG2770] Aminomethyl transferase; [GO:0006546] glycine catabolic process; [2.1.2.10] Aminomethyltransferase.; [K00605] aminomethyltransferase [EC:2.1.2.10]; [PF01571] Aminomethyltransferase folate-binding domain113.840.6154
38 Mapoly0005s0025 [GO:0016021] integral to membrane; [PF02537] CrcB-like protein116.340.4892
39 Mapoly3387s0001 -120.330.6015
40 Mapoly0002s0234 [GO:0005524] ATP binding; [KOG0055] Multidrug/pheromone exporter, ABC superfamily; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter125.550.5219
41 Mapoly0047s0072 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family126.250.5921
42 Mapoly0011s0205 [GO:0006355] regulation of transcription, DNA-dependent; [PF00447] HSF-type DNA-binding; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0009408] response to heat; [PTHR10015] HEAT SHOCK TRANSCRIPTION FACTOR127.000.4880
43 Mapoly0114s0049 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]128.710.5932
44 Mapoly0004s0176 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family129.370.5833
45 Mapoly0063s0012 [PF02696] Uncharacterized ACR, YdiU/UPF0061 family; [KOG2542] Uncharacterized conserved protein (YdiU family); [PTHR32057:SF1] SUBFAMILY NOT NAMED; [PTHR32057] FAMILY NOT NAMED132.130.5394
46 Mapoly0050s0043 [3.6.3.6] Proton-exporting ATPase.; [K01535] H+-transporting ATPase [EC:3.6.3.6]; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0205] Plasma membrane H+-transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase136.730.5910
47 Mapoly0074s0006 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF07983] X8 domain; [PF00332] Glycosyl hydrolases family 17137.150.5781
48 Mapoly0026s0078 [GO:0016020] membrane; [PF00571] CBS domain; [KOG0474] Cl- channel CLC-7 and related proteins (CLC superfamily); [GO:0006821] chloride transport; [PF00654] Voltage gated chloride channel; [GO:0055085] transmembrane transport; [GO:0005247] voltage-gated chloride channel activity; [GO:0030554] adenyl nucleotide binding; [PTHR11689] CHLORIDE CHANNEL140.940.5876
49 Mapoly0048s0082 [PTHR31032] FAMILY NOT NAMED142.210.5873
50 Mapoly0009s0035 [PF13855] Leucine rich repeat; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein148.250.3950
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