Guide Gene

Gene ID
Mapoly0006s0284
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [PF02390] Putative methyltransferase; [GO:0008176] tRNA (guanine-N7-)-methyltransferase activity; [KOG3115] Methyltransferase-like protein; [GO:0006400] tRNA modification

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0006s0284 [PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [PF02390] Putative methyltransferase; [GO:0008176] tRNA (guanine-N7-)-methyltransferase activity; [KOG3115] Methyltransferase-like protein; [GO:0006400] tRNA modification 0.00 1.0000
1 Mapoly0011s0087 -3.870.7194
2 Mapoly0036s0025 [PTHR21377] UNCHARACTERIZED; [PF06916] Protein of unknown function (DUF1279); [PTHR21377:SF2] UNCHARACTERIZED6.710.7018
3 Mapoly0075s0055 -10.390.7049
4 Mapoly0054s0113 [GO:0006396] RNA processing; [2.1.1.-] Methyltransferases.; [PTHR11061] RNA M5U METHYLTRANSFERASE FAMILY; [K00599] trans-aconitate 2-methyltransferase [EC:2.1.1.144]; [GO:0008173] RNA methyltransferase activity; [PF05958] tRNA (Uracil-5-)-methyltransferase; [KOG2187] tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes11.000.7293
5 Mapoly0010s0040 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family15.620.6379
6 Mapoly0096s0033 -16.730.6574
7 Mapoly0016s0010 [PTHR11778] SERYL-TRNA SYNTHETASE; [GO:0004828] serine-tRNA ligase activity; [GO:0005524] ATP binding; [K01875] seryl-tRNA synthetase [EC:6.1.1.11]; [GO:0006434] seryl-tRNA aminoacylation; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [KOG2509] Seryl-tRNA synthetase; [PF02403] Seryl-tRNA synthetase N-terminal domain; [GO:0000166] nucleotide binding; [6.1.1.11] Serine--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity16.910.7208
8 Mapoly0003s0283 [PF00135] Carboxylesterase family; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES17.350.6498
9 Mapoly0081s0053 [PF04452] RNA methyltransferase; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR30027] RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E; [K09761] ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]; [GO:0006364] rRNA processing25.280.6920
10 Mapoly0052s0014 -28.000.6786
11 Mapoly0073s0091 [PF03018] Dirigent-like protein; [PTHR21495] NUCLEOPORIN-RELATED30.400.6716
12 Mapoly0035s0136 [2.1.1.-] Methyltransferases.; [PTHR11061] RNA M5U METHYLTRANSFERASE FAMILY; [K00599] trans-aconitate 2-methyltransferase [EC:2.1.1.144]33.230.6788
13 Mapoly0005s0153 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF14622] Ribonuclease-III-like; [GO:0004525] ribonuclease III activity; [GO:0016075] rRNA catabolic process; [PTHR11207] RIBONUCLEASE III34.060.6944
14 Mapoly0051s0001 [GO:0006433] prolyl-tRNA aminoacylation; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [PTHR11451:SF6] PROLYL-TRNA SYNTHETASE; [GO:0004827] proline-tRNA ligase activity; [KOG4163] Prolyl-tRNA synthetase; [PTHR11451] TRNA SYNTHETASE-RELATED; [PF03129] Anticodon binding domain; [6.1.1.15] Proline--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF09180] Prolyl-tRNA synthetase, C-terminal; [K01881] prolyl-tRNA synthetase [EC:6.1.1.15]36.820.6970
15 Mapoly0084s0006 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [GO:0009396] folic acid-containing compound biosynthetic process; [PTHR11136] FOLYLPOLYGLUTAMATE SYNTHASE-RELATED; [GO:0009058] biosynthetic process; [6.3.2.17] Tetrahydrofolate synthase.; [KOG2525] Folylpolyglutamate synthase; [K01930] folylpolyglutamate synthase [EC:6.3.2.17]; [GO:0004326] tetrahydrofolylpolyglutamate synthase activity; [PTHR11136:SF0] SUBFAMILY NOT NAMED38.210.5899
16 Mapoly0041s0149 [GO:0009113] purine nucleobase biosynthetic process; [PF02844] Phosphoribosylglycinamide synthetase, N domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [PF01071] Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; [GO:0004637] phosphoribosylamine-glycine ligase activity; [K01945] phosphoribosylamine--glycine ligase [EC:6.3.4.13]; [PF02843] Phosphoribosylglycinamide synthetase, C domain; [6.3.4.13] Phosphoribosylamine--glycine ligase.38.250.6969
17 Mapoly0044s0070 [PTHR13734] TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER38.250.6282
18 Mapoly0009s0023 [PF04483] Protein of unknown function (DUF565)39.550.6693
19 Mapoly0122s0019 [GO:0003723] RNA binding; [PTHR10631] N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE; [K00555] tRNA (guanine-N2-)-methyltransferase [EC:2.1.1.32]; [2.1.1.32] Transferred entry: 2.1.1.213, 2.1.1.214, 2.1.1.215 and 2.1.1.216.; [GO:0008033] tRNA processing; [PF02005] N2,N2-dimethylguanosine tRNA methyltransferase; [GO:0004809] tRNA (guanine-N2-)-methyltransferase activity41.700.6567
20 Mapoly0118s0031 [PTHR13068:SF8] gb def: riken cdna 2410017i18 [mus musculus]; [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED43.820.6902
21 Mapoly0003s0096 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [PF09273] Rubisco LSMT substrate-binding46.670.6817
22 Mapoly0073s0001 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219)47.600.6080
23 Mapoly0135s0050 [GO:0016597] amino acid binding; [PF02729] Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; [K00609] aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]; [GO:0016743] carboxyl- or carbamoyltransferase activity; [GO:0006520] cellular amino acid metabolic process; [PTHR11405] CARBAMOYLTRANSFERASE RELATED; [KOG1504] Ornithine carbamoyltransferase OTC/ARG3; [PF00185] Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; [2.1.3.2] Aspartate carbamoyltransferase.51.380.6530
24 Mapoly0044s0135 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family52.310.6688
25 Mapoly0004s0173 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED61.340.6414
26 Mapoly0110s0034 [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006505] GPI anchor metabolic process; [GO:0006886] intracellular protein transport; [PF07819] PGAP1-like protein61.720.6788
27 Mapoly0123s0028 [PTHR23327:SF3] gb def: SPBC14F5.10c protein; [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis61.980.6746
28 Mapoly0040s0082 [PF00091] Tubulin/FtsZ family, GTPase domain; [PTHR30314] CELL DIVISION PROTEIN FTSZ-RELATED; [PF12327] FtsZ family, C-terminal domain63.470.6456
29 Mapoly0114s0040 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family64.140.6576
30 Mapoly0152s0023 -64.190.6720
31 Mapoly0056s0024 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PTHR22594:SF6] ASPARTYL-TRNA SYNTHETASE; [GO:0006421] asparaginyl-tRNA aminoacylation; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004816] asparagine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)64.800.6734
32 Mapoly0022s0124 -66.180.6599
33 Mapoly0043s0066 [PF01963] TraB family; [PTHR21530:SF1] gb def: Hypothetical protein At2g32340; [KOG2860] Uncharacterized conserved protein, contains TraB domain; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN67.080.6382
34 Mapoly0047s0017 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0766] Predicted mitochondrial carrier protein; [PTHR24089:SF107] PUTATIVE MITOCHONDRIAL CARRIER PROTEIN LOC49414168.010.6657
35 Mapoly0021s0119 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin70.140.6754
36 Mapoly0101s0005 [K01883] cysteinyl-tRNA synthetase [EC:6.1.1.16]; [PTHR10890] CYSTEINYL-TRNA SYNTHETASE; [PF01406] tRNA synthetases class I (C) catalytic domain; [6.1.1.16] Cysteine--tRNA ligase.; [KOG2007] Cysteinyl-tRNA synthetase75.720.6538
37 Mapoly0005s0009 [PTHR10742:SF97] HETERODISULFIDE REDUCTASE, SUBUNIT A; [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [KOG4254] Phytoene desaturase76.630.6751
38 Mapoly0057s0020 -77.850.6091
39 Mapoly0202s0015 -77.900.5882
40 Mapoly0015s0009 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity77.950.6590
41 Mapoly0034s0065 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED78.370.6297
42 Mapoly0095s0027 [GO:0003913] DNA photolyase activity; [KOG0133] Deoxyribodipyrimidine photolyase/cryptochrome; [PTHR11455] CRYPTOCHROME; [PF00875] DNA photolyase; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair; [K02295] cryptochrome80.120.5938
43 Mapoly0040s0083 [PF13650] Aspartyl protease80.420.6586
44 Mapoly0114s0038 [PF13812] Pentatricopeptide repeat domain; [PTHR13547] UNCHARACTERIZED; [PTHR13547:SF2] gb def: hypothetical protein [arabidopsis thaliana]; [PF11977] Zc3h12a-like Ribonuclease NYN domain80.460.6644
45 Mapoly0088s0068 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity; [KOG0838] RNA Methylase, SpoU family80.800.5950
46 Mapoly0226s0003 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process80.900.6219
47 Mapoly0074s0049 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [KOG1249] Predicted GTPases; [GO:0005525] GTP binding81.170.6630
48 Mapoly0080s0087 [PF09285] Elongation factor P, C-terminal; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005737] cytoplasm; [GO:0043043] peptide biosynthetic process; [K02356] elongation factor EF-P; [PF08207] Elongation factor P (EF-P) KOW-like domain; [PF01132] Elongation factor P (EF-P) OB domain; [PTHR30053] ELONGATION FACTOR P82.050.6715
49 Mapoly0007s0136 [GO:0005737] cytoplasm; [PTHR11476] HISTIDYL-TRNA SYNTHETASE; [PF13393] Histidyl-tRNA synthetase82.160.6744
50 Mapoly0053s0020 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [KOG2145] Cytoplasmic tryptophanyl-tRNA synthetase; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [PTHR10055:SF1] TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0006436] tryptophanyl-tRNA aminoacylation; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity84.660.6588
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