Guide Gene

Gene ID
Mapoly0004s0046
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF08007] Cupin superfamily protein; [KOG3706] Uncharacterized conserved protein; [PTHR13096] MINA53 (MYC INDUCED NUCLEAR ANTIGEN); [PTHR13096:SF4] SUBFAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0004s0046 [PF08007] Cupin superfamily protein; [KOG3706] Uncharacterized conserved protein; [PTHR13096] MINA53 (MYC INDUCED NUCLEAR ANTIGEN); [PTHR13096:SF4] SUBFAMILY NOT NAMED 0.00 1.0000
1 Mapoly0138s0007 [PTHR10233:SF14] TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA; [GO:0044237] cellular metabolic process; [KOG1467] Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2); [PTHR10233] TRANSLATION INITIATION FACTOR EIF-2B; [PF01008] Initiation factor 2 subunit family; [K03680] translation initiation factor eIF-2B delta subunit6.160.8219
2 Mapoly0116s0031 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family; [PF07721] Tetratricopeptide repeat; [GO:0042802] identical protein binding11.220.8172
3 Mapoly0072s0009 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family13.190.8155
4 Mapoly0082s0010 [PTHR13228] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5; [KOG2211] Predicted Golgi transport complex 1 protein; [PF10392] Golgi transport complex subunit 5; [GO:0006891] intra-Golgi vesicle-mediated transport; [PTHR13228:SF3] SUBFAMILY NOT NAMED; [GO:0017119] Golgi transport complex13.490.7713
5 Mapoly0001s0055 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family16.970.8058
6 Mapoly0001s0085 [PTHR19852] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG0282] mRNA splicing factor; [K12816] pre-mRNA-processing factor 17; [PF00400] WD domain, G-beta repeat18.970.7878
7 Mapoly0005s0185 [PTHR10811] FRINGE-RELATED; [KOG2246] Galactosyltransferases; [PF04646] Protein of unknown function, DUF60425.060.6798
8 Mapoly0081s0022 [PF04068] Possible Fer4-like domain in RNase L inhibitor, RLI; [GO:0005524] ATP binding; [PF00037] 4Fe-4S binding domain; [GO:0016887] ATPase activity; [K06174] ATP-binding cassette, sub-family E, member 1; [KOG0063] RNAse L inhibitor, ABC superfamily; [GO:0051536] iron-sulfur cluster binding; [PTHR19248] ATP-BINDING TRANSPORT PROTEIN-RELATED; [PF00005] ABC transporter29.100.7808
9 Mapoly0089s0054 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family29.150.7816
10 Mapoly0021s0083 [PTHR10644:SF2] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 160 KDA SUBUNIT)(CPSF 160 KDA SUBUNIT); [K14401] cleavage and polyadenylation specificity factor subunit 1; [PF10433] Mono-functional DNA-alkylating methyl methanesulfonate N-term; [PF03178] CPSF A subunit region; [GO:0005634] nucleus; [PTHR10644] DNA REPAIR/RNA PROCESSING CPSF FAMILY; [GO:0003676] nucleic acid binding; [KOG1896] mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit)29.580.7492
11 Mapoly0015s0194 [PTHR12747] IKAPPAB KINASE COMPLEX-ASSOCIATED PROTEIN; [KOG1920] IkappaB kinase complex, IKAP component; [K11373] elongator complex protein 1; [PF04762] IKI3 family30.580.7920
12 Mapoly0067s0022 [PTHR12746] NONSENSE-MEDIATED MRNA DECAY PROTEIN 3; [KOG2613] NMD protein affecting ribosome stability and mRNA decay; [PTHR12746:SF2] gb def: Hypothetical protein; [K07562] nonsense-mediated mRNA decay protein 3; [PF04981] NMD3 family31.180.7893
13 Mapoly0027s0127 [PTHR22841:SF4] GB DEF: MKIAA1988 PROTEIN (FRAGMENT); [GO:0005515] protein binding; [PTHR22841] FAMILY NOT NAMED; [K14548] U3 small nucleolar RNA-associated protein 4; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat34.500.7888
14 Mapoly0013s0060 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [PF00012] Hsp70 protein; [KOG0102] Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily35.500.7840
15 Mapoly0045s0043 -36.330.7747
16 Mapoly0170s0026 [PF04844] Transcriptional repressor, ovate39.520.6843
17 Mapoly0028s0021 -40.990.7645
18 Mapoly0004s0190 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [KOG2602] Predicted cell surface protein homologous to bacterial outer membrane proteins; [PF01103] Surface antigen43.470.7040
19 Mapoly0067s0046 [PF00488] MutS domain V; [GO:0005524] ATP binding; [KOG0217] Mismatch repair ATPase MSH6 (MutS family); [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [PF01624] MutS domain I44.280.7419
20 Mapoly0036s0055 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family; [PTHR24015:SF203] SUBFAMILY NOT NAMED; [PF03161] LAGLIDADG DNA endonuclease family; [GO:0004519] endonuclease activity44.900.6347
21 Mapoly0001s0543 [GO:0004014] adenosylmethionine decarboxylase activity; [PF02784] Pyridoxal-dependent decarboxylase, pyridoxal binding domain; [PF00278] Pyridoxal-dependent decarboxylase, C-terminal sheet domain; [4.1.1.17] Ornithine decarboxylase.; [KOG0622] Ornithine decarboxylase; [PF01536] Adenosylmethionine decarboxylase; [GO:0006597] spermine biosynthetic process; [PTHR11482] ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE; [K01581] ornithine decarboxylase [EC:4.1.1.17]; [GO:0003824] catalytic activity; [PTHR11482:SF6] DIAMINOPIMELATE DECARBOXYLASE-RELATED; [GO:0008295] spermidine biosynthetic process46.220.6683
22 Mapoly0103s0034 [K12872] pre-mRNA-splicing factor RBM22/SLT11; [PTHR14089] CELL CYCLE CONTROL PROTEIN; [PTHR14089:SF6] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0153] Predicted RNA-binding protein (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)48.990.7467
23 Mapoly0001s0533 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED49.170.7741
24 Mapoly0173s0012 [PF04113] Gpi16 subunit, GPI transamidase component; [KOG2407] GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis; [K05292] phosphatidylinositol glycan, class T; [GO:0016255] attachment of GPI anchor to protein; [PTHR12959:SF11] GPI TRANSAMIDASE COMPONENT PIG-T; [GO:0042765] GPI-anchor transamidase complex; [PTHR12959] GPI TRANSAMIDASE COMPONENT PIG-T-RELATED52.540.7374
25 Mapoly0056s0121 [KOG0286] G-protein beta subunit; [GO:0005515] protein binding; [PTHR19850] GUANINE NUCLEOTIDE-BINDING PROTEIN BETA (G PROTEIN BETA); [K04536] guanine nucleotide binding protein (G protein), beta 1; [PF00400] WD domain, G-beta repeat54.080.7391
26 Mapoly0002s0320 [PF13620] Carboxypeptidase regulatory-like domain; [PTHR23303] CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING; [KOG1948] Metalloproteinase-related collagenase pM555.100.7102
27 Mapoly0084s0050 [PTHR10751] GUANYLATE BINDING PROTEIN; [PF02263] Guanylate-binding protein, N-terminal domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding56.390.7706
28 Mapoly0070s0026 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED56.600.7582
29 Mapoly0050s0075 [PF01713] Smr domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family58.480.7076
30 Mapoly0008s0195 [PTHR13304] GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN; [PF04114] Gaa1-like, GPI transamidase component; [GO:0016021] integral to membrane; [PTHR13304:SF0] SUBFAMILY NOT NAMED; [GO:0042765] GPI-anchor transamidase complex; [K05289] glycosylphosphatidylinositol transamidase; [KOG3566] Glycosylphosphatidylinositol anchor attachment protein GAA162.670.7532
31 Mapoly0019s0041 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411)62.670.7461
32 Mapoly0025s0013 [GO:0010468] regulation of gene expression; [GO:0005777] peroxisome; [PTHR14379] LIMKAIN B (LKAP); [PF01936] NYN domain; [PF12872] OST-HTH/LOTUS domain62.930.7445
33 Mapoly0097s0043 -63.400.6881
34 Mapoly0070s0087 -65.610.7460
35 Mapoly0126s0019 [PF00183] Hsp90 protein; [GO:0005524] ATP binding; [GO:0006950] response to stress; [GO:0006457] protein folding; [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [K04079] molecular chaperone HtpG; [PTHR11528] HEAT SHOCK PROTEIN 90; [KOG0019] Molecular chaperone (HSP90 family); [GO:0051082] unfolded protein binding65.890.6749
36 Mapoly0016s0061 [KOG1605] TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation); [PF03031] NLI interacting factor-like phosphatase; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [GO:0005515] protein binding; [GO:0015031] protein transport; [PTHR12210:SF3] TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 50-RELATED; [PTHR12210] NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED; [GO:0005743] mitochondrial inner membrane65.970.7460
37 Mapoly0066s0060 [GO:0005515] protein binding; [GO:0005730] nucleolus; [KOG0310] Conserved WD40 repeat-containing protein; [PF09384] UTP15 C terminal; [GO:0006364] rRNA processing; [K14549] U3 small nucleolar RNA-associated protein 15; [PTHR19924] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat67.320.7529
38 Mapoly0043s0013 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily67.900.7310
39 Mapoly0097s0060 [PTHR13890:SF2] MITOCHONDRIAL RNA SPLICING PROTEIN MRS2-RELATED; [KOG2662] Magnesium transporters: CorA family; [GO:0015095] magnesium ion transmembrane transporter activity; [GO:0015693] magnesium ion transport; [PTHR13890] RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL68.190.6802
40 Mapoly0045s0031 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [6.1.1.5] Isoleucine--tRNA ligase.; [KOG0434] Isoleucyl-tRNA synthetase; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PTHR11946:SF11] SUBFAMILY NOT NAMED; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity68.410.7548
41 Mapoly0033s0014 [PF08772] Nin one binding (NOB1) Zn-ribbon like; [PTHR12814] RNA-BINDING PROTEIN NOB1; [K11883] RNA-binding protein NOB169.730.7492
42 Mapoly0113s0049 [PTHR32091] FAMILY NOT NAMED69.910.7318
43 Mapoly0041s0109 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family69.970.7587
44 Mapoly0052s0044 [KOG0953] Mitochondrial RNA helicase SUV3, DEAD-box superfamily; [PF12513] Mitochondrial degradasome RNA helicase subunit C terminal; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR12131] ATP-DEPENDENT RNA AND DNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PTHR12131:SF1] ATP-DEPENDENT DNA HELICASE MGPS75.980.7515
45 Mapoly0133s0003 [GO:0005524] ATP binding; [PTHR24031:SF91] SUBFAMILY NOT NAMED; [KOG0347] RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding80.370.7548
46 Mapoly0169s0023 [PTHR16274] NUCLEOLAR PROTEIN 8; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)81.390.7512
47 Mapoly0122s0045 [GO:0005524] ATP binding; [KOG0066] eIF2-interacting protein ABC50 (ABC superfamily); [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [K06184] ATP-binding cassette, sub-family F, member 1; [GO:0016887] ATPase activity; [PTHR19211:SF14] ATP-BINDING CASSETTE, SUB-FAMILY F (GCN20), MEMBER 1; [PF00005] ABC transporter81.950.6836
48 Mapoly0087s0033 [GO:0005506] iron ion binding; [1.14.21.6] Lathosterol oxidase.; [GO:0055114] oxidation-reduction process; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [KOG0872] Sterol C5 desaturase; [PTHR11863] STEROL DESATURASE; [K00227] lathosterol oxidase [EC:1.14.21.6]82.460.6219
49 Mapoly0006s0240 [PF13343] Bacterial extracellular solute-binding protein; [PTHR30222] SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN82.750.7026
50 Mapoly0090s0009 [PTHR13130] 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED; [PF11571] Mediator complex subunit 2783.620.7406
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