Guide Gene

Gene ID
Mapoly0004s0009
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [KOG1487] GTP-binding protein DRG1 (ODN superfamily); [PF02824] TGS domain; [GO:0005525] GTP binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0004s0009 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [KOG1487] GTP-binding protein DRG1 (ODN superfamily); [PF02824] TGS domain; [GO:0005525] GTP binding 0.00 1.0000
1 Mapoly0047s0025 [PTHR31755] FAMILY NOT NAMED4.900.7173
2 Mapoly0003s0273 [PF02769] AIR synthase related protein, C-terminal domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [6.3.3.1] Phosphoribosylformylglycinamidine cyclo-ligase.; [K01933] phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]; [PF00586] AIR synthase related protein, N-terminal domain; [GO:0003824] catalytic activity; [PTHR10520:SF22] PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE7.550.7551
3 Mapoly0001s0476 [K01714] dihydrodipicolinate synthase [EC:4.2.1.52]; [GO:0016829] lyase activity; [4.2.1.52] Transferred entry: 4.3.3.7.; [PTHR12128:SF15] DIHYDRODIPICOLINATE SYNTHASE; [GO:0008152] metabolic process; [PTHR12128] DIHYDRODIPICOLINATE SYNTHASE; [PF00701] Dihydrodipicolinate synthetase family7.750.7312
4 Mapoly0132s0010 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0004815] aspartate-tRNA ligase activity; [GO:0005737] cytoplasm; [GO:0006422] aspartyl-tRNA aminoacylation; [6.1.1.12] Aspartate--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [KOG0556] Aspartyl-tRNA synthetase; [PTHR22594:SF10] SUBFAMILY NOT NAMED; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)21.350.7149
5 Mapoly0025s0131 [GO:0006433] prolyl-tRNA aminoacylation; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [GO:0004827] proline-tRNA ligase activity; [KOG4163] Prolyl-tRNA synthetase; [PTHR11451] TRNA SYNTHETASE-RELATED; [PF03129] Anticodon binding domain; [6.1.1.15] Proline--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF09180] Prolyl-tRNA synthetase, C-terminal; [K01881] prolyl-tRNA synthetase [EC:6.1.1.15]23.350.6991
6 Mapoly0014s0101 [PTHR23105:SF5] 50S RIBOSOMAL PROTEIN L1P; [PF00687] Ribosomal protein L1p/L10e family; [KOG1685] Uncharacterized conserved protein; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER24.740.6707
7 Mapoly0140s0011 [KOG3080] Nucleolar protein-like/EBNA1-binding protein; [PTHR13028] RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED; [PF05890] Eukaryotic rRNA processing protein EBP2; [PTHR13028:SF0] SUBFAMILY NOT NAMED25.380.6888
8 Mapoly0011s0174 [KOG2967] Uncharacterized conserved protein; [PTHR13563] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING; [PTHR13563:SF6] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING 2; [PF01746] tRNA (Guanine-1)-methyltransferase26.040.6964
9 Mapoly0020s0151 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [GO:0006412] translation35.330.6651
10 Mapoly0010s0185 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10169] DNA TOPOISOMERASE/GYRASE; [K02469] DNA gyrase subunit A [EC:5.99.1.3]; [GO:0006265] DNA topological change; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [PF00521] DNA gyrase/topoisomerase IV, subunit A; [GO:0005694] chromosome; [KOG0355] DNA topoisomerase type II; [GO:0003916] DNA topoisomerase activity; [PF03989] DNA gyrase C-terminal domain, beta-propeller; [5.99.1.3] DNA topoisomerase (ATP-hydrolyzing).35.440.6851
11 Mapoly0010s0169 [PTHR31184] FAMILY NOT NAMED; [KOG3450] Huntingtin interacting protein HYPK40.000.6563
12 Mapoly0045s0044 [GO:0005524] ATP binding; [KOG2355] Predicted ABC-type transport, ATPase component/CCR4 associated factor; [PTHR24220] FAMILY NOT NAMED; [GO:0016887] ATPase activity; [GO:0006810] transport; [PF08402] TOBE domain; [GO:0016820] hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; [GO:0043190] ATP-binding cassette (ABC) transporter complex; [GO:0005215] transporter activity; [PF00005] ABC transporter44.670.6208
13 Mapoly0074s0049 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [KOG1249] Predicted GTPases; [GO:0005525] GTP binding48.370.6680
14 Mapoly0065s0074 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [K01868] threonyl-tRNA synthetase [EC:6.1.1.3]; [PTHR11451] TRNA SYNTHETASE-RELATED; [6.1.1.3] Threonine--tRNA ligase.; [PF03129] Anticodon binding domain; [KOG1637] Threonyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [PF02824] TGS domain; [GO:0004812] aminoacyl-tRNA ligase activity49.480.6652
15 Mapoly0169s0014 -51.980.6644
16 Mapoly0054s0003 [K01409] O-sialoglycoprotein endopeptidase [EC:3.4.24.57]; [KOG2708] Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold); [PF00814] Glycoprotease family; [PTHR11735] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [3.4.24.57] O-sialoglycoprotein endopeptidase.; [PTHR11735:SF6] SUBFAMILY NOT NAMED53.100.6624
17 Mapoly0061s0018 [KOG2318] Uncharacterized conserved protein; [GO:0005634] nucleus; [PF08159] NUC153 domain; [PTHR12202] UNCHARACTERIZED53.480.6435
18 Mapoly0008s0051 -56.160.5794
19 Mapoly0010s0007 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit56.780.6069
20 Mapoly0002s0326 [GO:0003922] GMP synthase (glutamine-hydrolyzing) activity; [GO:0005524] ATP binding; [PF00958] GMP synthase C terminal domain; [6.3.5.2] GMP synthase (glutamine-hydrolyzing).; [KOG1622] GMP synthase; [PTHR11922] GMP SYNTHASE-RELATED; [GO:0006177] GMP biosynthetic process; [K01951] GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]; [PF00117] Glutamine amidotransferase class-I; [GO:0006164] purine nucleotide biosynthetic process57.250.6678
21 Mapoly0012s0193 [PTHR31365] FAMILY NOT NAMED57.920.6036
22 Mapoly0026s0084 [GO:0003723] RNA binding; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [KOG1596] Fibrillarin and related nucleolar RNA-binding proteins; [PF01269] Fibrillarin; [GO:0006364] rRNA processing; [GO:0008033] tRNA processing; [K14563] rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]; [PTHR10335] RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN59.700.6550
23 Mapoly0012s0037 [PTHR11751:SF22] AMINOTRANSFERASE RELATED; [GO:0009058] biosynthetic process; [K10206] LL-diaminopimelate aminotransferase [EC:2.6.1.83]; [GO:0030170] pyridoxal phosphate binding; [2.6.1.83] LL-diaminopimelate aminotransferase.; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0010285] L,L-diaminopimelate aminotransferase activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED63.770.6541
24 Mapoly0100s0024 [KOG1763] Uncharacterized conserved protein, contains CCCH-type Zn-finger; [PTHR12681] ZINC FINGER-CONTAINING PROTEIN P48ZNF70.140.5945
25 Mapoly0080s0041 [PTHR14894] CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3; [PF05600] Protein of unknown function (DUF773); [KOG2607] CDK5 activator-binding protein70.870.5760
26 Mapoly0015s0052 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE72.500.6387
27 Mapoly0005s0181 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [6.1.1.17] Glutamate--tRNA ligase.; [KOG1149] Glutamyl-tRNA synthetase (mitochondrial); [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]75.470.6558
28 Mapoly0040s0008 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [PF01103] Surface antigen75.630.6404
29 Mapoly0098s0036 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain76.540.6412
30 Mapoly0098s0050 [KOG3031] Protein required for biogenesis of the ribosomal 60S subunit; [PTHR12728] BRIX DOMAIN CONTAINING PROTEIN; [PTHR12728:SF0] SUBFAMILY NOT NAMED; [PF04427] Brix domain76.650.6378
31 Mapoly0036s0028 [PF04939] Ribosome biogenesis regulatory protein (RRS1); [KOG1765] Regulator of ribosome synthesis; [GO:0042254] ribosome biogenesis; [GO:0005634] nucleus; [PTHR17602] RIBOSOME BIOGENESIS REGULATORY PROTEIN77.330.6397
32 Mapoly0029s0145 [GO:0003677] DNA binding; [PF00046] Homeobox domain79.240.6135
33 Mapoly0132s0028 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [KOG1653] Single-stranded DNA-binding protein; [PF00436] Single-strand binding protein family; [K03111] single-strand DNA-binding protein80.010.6270
34 Mapoly0153s0015 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 281.610.6107
35 Mapoly0038s0028 [6.3.4.5] Argininosuccinate synthase.; [GO:0005524] ATP binding; [PF00764] Arginosuccinate synthase; [GO:0004055] argininosuccinate synthase activity; [GO:0006526] arginine biosynthetic process; [PTHR11587] ARGININOSUCCINATE SYNTHASE; [KOG1706] Argininosuccinate synthase; [K01940] argininosuccinate synthase [EC:6.3.4.5]84.110.6360
36 Mapoly0012s0185 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase86.490.6130
37 Mapoly0012s0199 [PF12049] Protein of unknown function (DUF3531)87.240.6121
38 Mapoly0028s0114 [K14565] nucleolar protein 58; [PF01798] Putative snoRNA binding domain; [PF08060] NOSIC (NUC001) domain; [PTHR10894:SF1] NUCLEOLAR PROTEIN NOP56-RELATED; [PF08156] NOP5NT (NUC127) domain; [KOG2572] Ribosome biogenesis protein - Nop58p/Nop5p; [PTHR10894] NUCLEOLAR PROTEIN 5 (NUCLEOLAR PROTEIN NOP5)(NOP58)89.800.6297
39 Mapoly0007s0190 [PTHR12830] FAMILY NOT NAMED; [PTHR12830:SF9] SUBFAMILY NOT NAMED; [PF12862] Anaphase-promoting complex subunit 5; [K03352] anaphase-promoting complex subunit 5; [KOG4322] Anaphase-promoting complex (APC), subunit 591.360.5815
40 Mapoly0148s0006 [PF07890] Rrp15p; [PTHR13245] FAMILY NOT NAMED91.920.6364
41 Mapoly0053s0020 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [KOG2145] Cytoplasmic tryptophanyl-tRNA synthetase; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [PTHR10055:SF1] TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0006436] tryptophanyl-tRNA aminoacylation; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity92.650.6317
42 Mapoly0007s0122 [2.6.1.9] Histidinol-phosphate transaminase.; [GO:0009058] biosynthetic process; [KOG0633] Histidinol phosphate aminotransferase; [GO:0030170] pyridoxal phosphate binding; [K00817] histidinol-phosphate aminotransferase [EC:2.6.1.9]; [PF00155] Aminotransferase class I and II; [PTHR11751:SF3] HISTIDINOL-PHOSPHATE AMINOTRANSFERASE; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED94.500.6101
43 Mapoly0148s0015 [PF04969] CS domain; [PF09032] Siah interacting protein, N terminal; [KOG3260] Calcyclin-binding protein CacyBP; [PF05002] SGS domain; [K04507] calcyclin binding protein; [PTHR13164] CALICYLIN BINDING PROTEIN95.910.5508
44 Mapoly0065s0027 [PTHR22959:SF0] SUBFAMILY NOT NAMED; [KOG4325] Uncharacterized conserved protein; [K14294] partner of Y14 and mago; [GO:0005515] protein binding; [PTHR22959] PYM PROTEIN; [PF09282] Mago binding96.750.5657
45 Mapoly0045s0011 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PF01588] Putative tRNA binding domain; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0000049] tRNA binding; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG1247] Methionyl-tRNA synthetase96.760.6311
46 Mapoly0041s0149 [GO:0009113] purine nucleobase biosynthetic process; [PF02844] Phosphoribosylglycinamide synthetase, N domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [PF01071] Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; [GO:0004637] phosphoribosylamine-glycine ligase activity; [K01945] phosphoribosylamine--glycine ligase [EC:6.3.4.13]; [PF02843] Phosphoribosylglycinamide synthetase, C domain; [6.3.4.13] Phosphoribosylamine--glycine ligase.98.430.6332
47 Mapoly0007s0267 -102.530.5841
48 Mapoly0022s0008 [PTHR22808] NCL1(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [PF01189] NOL1/NOP2/sun family; [KOG2198] tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily; [PTHR22808:SF1] PUTATIVE METHYLTRANSFERASE NCL1(YEAST)-RELATED103.490.6312
49 Mapoly0062s0065 [GO:0005524] ATP binding; [PTHR24031:SF96] LOC553462 PROTEIN (FRAGMENT); [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0346] RNA helicase103.980.6209
50 Mapoly0090s0010 [K04567] lysyl-tRNA synthetase, class II [EC:6.1.1.6]; [GO:0005524] ATP binding; [PTHR22594:SF4] LYSYL-TRNA SYNTHETASE; [6.1.1.6] Lysine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [KOG1885] Lysyl-tRNA synthetase (class II); [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)104.610.6157
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