Guide Gene
- Gene ID
- Mapoly0002s0019
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF00919] Uncharacterized protein family UPF0004; [PF04055] Radical SAM superfamily; [GO:0051539] 4 iron, 4 sulfur cluster binding; [GO:0009451] RNA modification; [KOG4355] Predicted Fe-S oxidoreductase; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [PTHR11918:SF45] UNCHARACTERIZED; [PTHR11918] RADICAL SAM PROTEINS; [PF01938] TRAM domain
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0002s0019 [PF00919] Uncharacterized protein family UPF0004; [PF04055] Radical SAM superfamily; [GO:0051539] 4 iron, 4 sulfur cluster binding; [GO:0009451] RNA modification; [KOG4355] Predicted Fe-S oxidoreductase; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [PTHR11918:SF45] UNCHARACTERIZED; [PTHR11918] RADICAL SAM PROTEINS; [PF01938] TRAM domain 0.00 1.0000 1 Mapoly0106s0017 [KOG2231] Predicted E3 ubiquitin ligase; [PTHR22938:SF0] SUBFAMILY NOT NAMED; [PTHR22938] ZINC FINGER PROTEIN 598 3.46 0.6662 2 Mapoly0173s0010 [GO:0005524] ATP binding; [PF09262] Peroxisome biogenesis factor 1, N-terminal; [GO:0005777] peroxisome; [PTHR23077:SF12] PEROXISOME BIOGENESIS FACTOR 1 (PEROXIN-1); [GO:0006625] protein targeting to peroxisome; [GO:0005778] peroxisomal membrane; [GO:0007031] peroxisome organization; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [GO:0042623] ATPase activity, coupled; [KOG0735] AAA+-type ATPase; [K13338] peroxin-1 10.30 0.6542 3 Mapoly0060s0072 [PTHR12553] RIBONUCLEASE Z; [PF12706] Beta-lactamase superfamily domain 13.42 0.5787 4 Mapoly0029s0023 - 18.33 0.6138 5 Mapoly0008s0029 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain 24.19 0.5576 6 Mapoly0024s0108 [PF13371] Tetratricopeptide repeat; [PTHR23082] TRANSCRIPTION INITIATION FACTOR IIIC (TFIIIC), POLYPEPTIDE 3-RELATED; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF13174] Tetratricopeptide repeat; [KOG2076] RNA polymerase III transcription factor TFIIIC 29.14 0.6154 7 Mapoly0002s0111 [GO:0005524] ATP binding; [PF13445] RING-type zinc-finger; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 31.70 0.5980 8 Mapoly0014s0202 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [PTHR11089:SF3] GTP-BINDING PROTEIN-RELATED PLANT/BACTERIA; [K13427] nitric-oxide synthase, plant [EC:1.14.13.39]; [1.14.13.39] Nitric-oxide synthase (NADPH dependent).; [GO:0005525] GTP binding 34.76 0.5882 9 Mapoly0001s0157 [K10601] E3 ubiquitin-protein ligase synoviolin [EC:6.3.2.19]; [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR12477] SYNOVIOLIN-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [6.3.2.19] Ubiquitin--protein ligase. 37.96 0.5809 10 Mapoly0009s0058 [K01265] methionyl aminopeptidase [EC:3.4.11.18]; [PTHR10804:SF9] METHIONINE AMINOPEPTIDASE 2; [GO:0008235] metalloexopeptidase activity; [3.4.11.18] Methionyl aminopeptidase.; [KOG2775] Metallopeptidase; [GO:0004177] aminopeptidase activity; [PF00557] Metallopeptidase family M24; [GO:0006508] proteolysis; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) 38.50 0.5104 11 Mapoly0045s0140 [PTHR21004] SERINE PROTEASE-RELATED; [PTHR21004:SF0] SUBFAMILY NOT NAMED; [PF13365] Trypsin-like peptidase domain 39.55 0.4711 12 Mapoly0020s0171 [KOG2388] UDP-N-acetylglucosamine pyrophosphorylase; [GO:0070569] uridylyltransferase activity; [GO:0008152] metabolic process; [K12447] UDP-sugar pyrophosphorylase [EC:2.7.7.64]; [PF01704] UTP--glucose-1-phosphate uridylyltransferase; [PTHR11952] UDP- GLUCOSE PYROPHOSPHORYLASE; [2.7.7.64] UTP-monosaccharide-1-phosphate uridylyltransferase. 46.17 0.4899 13 Mapoly0011s0008 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [KOG0941] E3 ubiquitin protein ligase; [GO:0004842] ubiquitin-protein ligase activity; [PF00415] Regulator of chromosome condensation (RCC1) repeat; [PF00632] HECT-domain (ubiquitin-transferase) 46.86 0.5867 14 Mapoly0035s0046 [GO:0003677] DNA binding; [PF02365] No apical meristem (NAM) protein; [PTHR31744] FAMILY NOT NAMED; [GO:0006355] regulation of transcription, DNA-dependent 48.71 0.5367 15 Mapoly0061s0091 [PTHR10229:SF1] GTP-BINDING PROTEIN HFLX; [PF01926] 50S ribosome-binding GTPase; [KOG0410] Predicted GTP binding protein; [PTHR10229] GTP-BINDING PROTEIN HFLX; [GO:0005525] GTP binding 49.60 0.5066 16 Mapoly0007s0016 - 52.06 0.5855 17 Mapoly0003s0305 [PF13481] AAA domain; [PF13662] Toprim domain; [GO:0003697] single-stranded DNA binding; [PTHR12873] T7-LIKE MITOCHONDRIAL DNA HELICASE; [KOG2373] Predicted mitochondrial DNA helicase twinkle; [GO:0043139] 5'-3' DNA helicase activity 52.52 0.5902 18 Mapoly0088s0066 [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 55.32 0.4729 19 Mapoly0056s0097 [GO:0005524] ATP binding; [K01103] 6-phosphofructo-2-kinase / fructose-2,6-bisphosphatase [EC:2.7.1.105 3.1.3.46]; [KOG0234] Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase; [PF00686] Starch binding domain; [GO:0006000] fructose metabolic process; [PTHR10606] 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE; [GO:0003824] catalytic activity; [3.1.3.46] Fructose-2,6-bisphosphate 2-phosphatase.; [GO:0003873] 6-phosphofructo-2-kinase activity; [PF01591] 6-phosphofructo-2-kinase; [GO:0006003] fructose 2,6-bisphosphate metabolic process; [PF00300] Histidine phosphatase superfamily (branch 1); [2.7.1.105] 6-phosphofructo-2-kinase. 58.17 0.5120 20 Mapoly0113s0019 [KOG2354] RNA Polymerase C (III) 37 kDa subunit; [GO:0005634] nucleus; [PTHR12069] DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE (RNA POLYMERASE III SUBUNIT 5); [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04801] Sin-like protein conserved region 60.40 0.5903 21 Mapoly0001s0516 [KOG2428] Uncharacterized conserved protein; [PF04004] Leo1-like protein; [PTHR23146] LEO1 PROTEIN; [PTHR23146:SF0] SUBFAMILY NOT NAMED 64.20 0.5771 22 Mapoly0049s0091 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [KOG0385] Chromatin remodeling complex WSTF-ISWI, small subunit 66.25 0.5204 23 Mapoly0124s0024 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24056:SF39] CDC2-RELATED PROTEIN KINASE; [KOG0600] Cdc2-related protein kinase; [PTHR24056] CELL DIVISION PROTEIN KINASE 69.71 0.4401 24 Mapoly0066s0087 [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF09382] RQC domain; [KOG0353] ATP-dependent DNA helicase; [3.6.4.12] DNA helicase.; [K10899] ATP-dependent DNA helicase Q1 [EC:3.6.4.12]; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [GO:0005622] intracellular; [GO:0003676] nucleic acid binding; [GO:0043140] ATP-dependent 3'-5' DNA helicase activity; [PF00570] HRDC domain 73.70 0.5635 25 Mapoly0013s0004 [KOG2511] Nicotinic acid phosphoribosyltransferase; [2.4.2.11] Transferred entry: 6.3.4.21.; [K00763] nicotinate phosphoribosyltransferase [EC:2.4.2.11]; [PTHR11098] NICOTINATE PHOSPHORIBOSYLTRANSFERASE; [PTHR11098:SF1] NICOTINATE PHOSPHORIBOSYLTRANSFERASE; [PF04095] Nicotinate phosphoribosyltransferase (NAPRTase) family 76.19 0.5021 26 Mapoly0156s0014 [GO:0006355] regulation of transcription, DNA-dependent; [PF10483] Elongator subunit Iki1; [PTHR15641] FAMILY NOT NAMED; [PTHR15641:SF1] RETINOIC ACID INDUCED GENE-RELATED 81.98 0.4861 27 Mapoly0033s0056 [PF06203] CCT motif; [PTHR31319] FAMILY NOT NAMED; [GO:0005515] protein binding 82.16 0.4885 28 Mapoly0031s0039 [GO:0003677] DNA binding; [PTHR13408] DNA-DIRECTED RNA POLYMERASE III; [PF05132] RNA polymerase III RPC4; [PTHR13408:SF0] SUBFAMILY NOT NAMED; [GO:0005666] DNA-directed RNA polymerase III complex; [GO:0003899] DNA-directed RNA polymerase activity; [GO:0006383] transcription from RNA polymerase III promoter 85.06 0.5345 29 Mapoly0069s0005 [PF11919] Domain of unknown function (DUF3437); [KOG1851] Uncharacterized conserved protein; [K06699] proteasome activator subunit 4; [PTHR32170] FAMILY NOT NAMED 85.21 0.5384 30 Mapoly0043s0035 [KOG4283] Transcription-coupled repair protein CSA, contains WD40 domain; [GO:0005515] protein binding; [K10570] DNA excision repair protein ERCC-8; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat 88.18 0.5567 31 Mapoly0009s0102 [PTHR11567] ACID PHOSPHATASE-RELATED; [K13121] protein FRA10AC1; [PTHR11567:SF25] FRA10AC1 PROTEIN; [KOG1297] Uncharacterized conserved protein; [PF09725] Folate-sensitive fragile site protein Fra10Ac1 101.30 0.5250 32 Mapoly0169s0013 - 101.73 0.5352 33 Mapoly0122s0032 [PF14695] Lines C-terminus 103.15 0.5121 34 Mapoly0027s0149 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031:SF2] SUBFAMILY NOT NAMED; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF13959] Domain of unknown function (DUF4217); [KOG0345] ATP-dependent RNA helicase 103.23 0.5466 35 Mapoly0042s0063 [PF01494] FAD binding domain; [KOG3855] Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis; [PTHR13789] MONOOXYGENASE 104.63 0.4824 36 Mapoly0011s0161 [GO:0003677] DNA binding; [PTHR11945] MADS BOX PROTEIN; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0046983] protein dimerization activity; [PF01486] K-box region; [GO:0003700] sequence-specific DNA binding transcription factor activity; [KOG0014] MADS box transcription factor; [K09264] MADS-box transcription factor, plant; [GO:0005634] nucleus; [PF00319] SRF-type transcription factor (DNA-binding and dimerisation domain) 108.90 0.4322 37 Mapoly0127s0027 [PF12579] Protein of unknown function (DUF3755); [PTHR14000] FAMILY NOT NAMED 109.39 0.4851 38 Mapoly0019s0182 [KOG2473] RNA polymerase III transcription factor (TF)IIIC subunit; [PTHR13230] GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5; [PF09734] RNA polymerase III transcription factor (TF)IIIC subunit 110.36 0.5451 39 Mapoly0045s0120 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0764] Mitochondrial FAD carrier protein 111.95 0.4428 40 Mapoly0177s0011 [GO:0006289] nucleotide-excision repair; [PF00867] XPG I-region; [PF00752] XPG N-terminal domain; [GO:0003697] single-stranded DNA binding; [K10846] DNA excision repair protein ERCC-5; [GO:0005634] nucleus; [PTHR11081:SF1] DNA-REPAIR PROTEIN XP-G; [GO:0006281] DNA repair; [GO:0004518] nuclease activity; [PTHR11081] XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY; [GO:0004519] endonuclease activity 118.52 0.5239 41 Mapoly0080s0030 [KOG1532] GTPase XAB1, interacts with DNA repair protein XPA; [GO:0000166] nucleotide binding; [K06883] 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]; [PTHR21231] XPA-BINDING PROTEIN 1-RELATED; [PF03029] Conserved hypothetical ATP binding protein 118.79 0.4493 42 Mapoly0016s0037 - 119.92 0.5531 43 Mapoly0032s0018 [KOG0796] Spliceosome subunit 123.30 0.5362 44 Mapoly0037s0036 [GO:0005524] ATP binding; [PTHR23077:SF9] PEROXISOME ASSEMBLY FACTOR-2 (PEROXISOMAL-TYPE ATPASE 1); [KOG0736] Peroxisome assembly factor 2 containing the AAA+-type ATPase domain; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [K13339] peroxin-6 124.71 0.4753 45 Mapoly0001s0261 [PF02383] SacI homology domain; [PTHR11200] INOSITOL 5-PHOSPHATASE; [KOG1888] Putative phosphoinositide phosphatase; [GO:0042578] phosphoric ester hydrolase activity 128.26 0.4906 46 Mapoly0048s0033 [PTHR23079] RNA-DEPENDENT RNA POLYMERASE; [GO:0003968] RNA-directed RNA polymerase activity; [KOG0988] RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; [PF05183] RNA dependent RNA polymerase 128.86 0.4952 47 Mapoly0041s0084 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [KOG2793] Putative N2,N2-dimethylguanosine tRNA methyltransferase 129.21 0.4408 48 Mapoly0170s0019 [PF07719] Tetratricopeptide repeat; [PTHR22767:SF3] PEPTIDE ALPHA-N-ACETYLTRANSFERASE-RELATED; [KOG2053] Mitochondrial inheritance and actin cytoskeleton organization protein; [PF09797] N-acetyltransferase B complex (NatB) non catalytic subunit; [PTHR22767] N-TERMINAL ACETLYTRANSFERASE-RELATED 132.27 0.5357 49 Mapoly0101s0036 [KOG1782] Small Nuclear ribonucleoprotein splicing factor; [PTHR15588] LSM1; [K12620] U6 snRNA-associated Sm-like protein LSm1; [PF01423] LSM domain 134.83 0.4317 50 Mapoly0042s0017 [PF12689] Acid Phosphatase; [GO:0016791] phosphatase activity; [PTHR17901] FAMILY NOT NAMED 136.32 0.4665