Guide Gene

Gene ID

g1849

Organism

Synechococcus elongatus PCC 7942

Platform ID

PCC7942

Description

RNA polymerase sigma factor SigC

    Coexpressed Gene List
    Coexpressed Gene Network

Summary

 Primary Transcript ID

Synpcc7942_1849

 Alias

-

 Description

RNA polymerase sigma factor SigC

Functional Annotation

 Gene Ontology

Biological Process

• GO:0006355    regulation of transcription, DNA-dependent    
• GO:0006352    transcription initiation    

Cellular Component

-

Molecular Function

• GO:0003677    DNA binding    
• GO:0016987    sigma factor activity    
• GO:0003700    transcription factor activity    

 Function Category

• K:    Transcription

Sequence

 Nucleotide (1197 nt, CDS)

                                >g1849
ATGACGGCTGCCTATTTCACTCATTCCACGGAATACGAAGCAGTTTCGTCTGACGTCGCTAACTTGTCAGAAACTCCAAGTTCTGAAGCCGTGGAAACAGCGGTCTCTAGCCGCCAGTCAACCGATCTGATTCGGCTGTATTTACAAGACATCGGGCGAGTCCGTCTCCTTGGGCGCGATGAAGAGGTGAGTGAGGCACGGTGGGTGCAGCGCTACATGCAGTTGTTGGCGGTTCGGAATTGCGTCGCCGTTGAAGAAGGAGGGGTTCTCAAGGATTACGTTGACCTGCAGGAAGGCCGCGATCGCCTGACCGCGCAGCTGGGTCACCGTCCTTCCTTTGAAGCTTGGGCCAAGATTGTCGATTGTTCCTTGACTGAATTACGCCAAGCACTACAACTGGGGCTGCATCGCTGGGCTGAAGTCTGCCAGCTCGATCTTGAGGAATTAAAGCAGGTCTGCAAAGAAGGCCAGCGAGCTAAAGATCACATGATCAAGGCCAACCTCCGTTTAGTTGTTTCCGTCGCTAAAAAATATCAAAACCGAGGACTAGAGCTTCTCGATCTCGTTCAAGAAGGCACCCTAGGACTAGAGCGGGCTGTTGAGAAGTTCGACCCGACGAAAGGCTATCGATTTAGTACCTATGCCTATTGGTGGATTCGTCAGGGAATTACCCGCGCGATCGCAACCCAAAGTCGGACGATTCGCTTGCCCGTCCATGTGACGGAGAAATTAAACCGGATCAAAAAAGCCCAGCGCAAAATTGCGCAAACAAAGGGCAGAACTGCCAACCTTGAGGAGATTGCTCAAGAACTTGAGATGACCCCCGATCAAGTGCGGGAAGTCCTGTTGCGGGTGCCCAAATCGATTTCCCTAGAAACCCGTGTTGGCAAGGAAAAGGATACGGAGCTAGGGGATTTGCTGGAAACCACCGATTTCACCCCAGAAGAACGATTGACTCAGGAATCCCTCAGCAATGATCTGCAGCGGTTATTGCTCGAACTCAATCACCGCGAACGCGATGTAATTCGGATGCGGTTTGGTCTGCGCGATGGGCAGATTTATTCCCTCGCTGAAATTGGGCAAGTGCTCGACCTATCGCGTGAGCGAGTTCGCCAGATTGAGGCTAAGGCCCTGCAAAAGCTGCGGCATCCGCGACGACGCAATCAGATCCGTGACTATTTGGAGTTGTTGCACTAG
                            

 Translation (398 aa)

                                >g1849
MTAAYFTHSTEYEAVSSDVANLSETPSSEAVETAVSSRQSTDLIRLYLQDIGRVRLLGRDEEVSEARWVQRYMQLLAVRNCVAVEEGGVLKDYVDLQEGRDRLTAQLGHRPSFEAWAKIVDCSLTELRQALQLGLHRWAEVCQLDLEELKQVCKEGQRAKDHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATQSRTIRLPVHVTEKLNRIKKAQRKIAQTKGRTANLEEIAQELEMTPDQVREVLLRVPKSISLETRVGKEKDTELGDLLETTDFTPEERLTQESLSNDLQRLLLELNHRERDVIRMRFGLRDGQIYSLAEIGQVLDLSRERVRQIEAKALQKLRHPRRRNQIRDYLELLH