Guide Gene

Gene ID
g0649
Organism
Synechococcus elongatus PCC 7942
Platform ID
PCC7942
Description
RNA polymerase sigma factor RpoD

Summary

 Primary Transcript ID

Synpcc7942_0649

 Alias

-

 Description

RNA polymerase sigma factor RpoD

Functional Annotation

 Gene Ontology

Biological Process

  • GO:0006355    regulation of transcription, DNA-dependent    
  • GO:0006352    transcription initiation    

Cellular Component

    -

Molecular Function

  • GO:0003677    DNA binding    
  • GO:0016987    sigma factor activity    
  • GO:0003700    transcription factor activity    
 Function Category
  • K:    Transcription

Sequence

 Nucleotide (1200 nt, CDS)
                                >g0649
ATGACGCAGCTGATTTCAATCGATAAGGAGCAAGAGGAAGCCGGCATGACTCAGGCCACCGAACTACTCGACCCCGCGCTCAAACCGGCGGAAACAAAGGCCAAACGGAGTAGTCGCAAAAAAGCGACAACTGCTGTTGTTGAGCCCGCAACCACGATCGCTCCGACTGCAGATGTCGACGCGATCGACGACGAGGATTCGGTTGGTGAGGATGAAGATGCGGCGGCCAAAGCCAAAGCTAAAGTCCGCAAAACCTATACAGAAGACTCAATTCGGCTCTATCTCCAAGAGATTGGTCGAATTCGGTTGCTGCGGGCCGATGAAGAAATTGAGCTCGCCCGTCAAATCGCTGACTTGCTTGCTCTAGAACGCATTCGCGATGAGTTGCTCGAACAGCTCGATCGTTTGCCCAGCGACGCCGAGTGGGCCGCTGCTGTTGACTCGCCGCTGGATGAATTCCGCCGCCGCCTGTTCCGGGGTCGCCGCGCCAAGGACAAGATGGTGCAGTCGAACCTGCGGTTGGTGGTGTCGATCGCCAAGAAATACATGAACCGGGGTCTGTCCTTCCAAGACCTGATTCAGGAAGGTAGCTTGGGTCTGATTCGGGCTGCCGAAAAGTTTGACCACGAGAAGGGCTACAAGTTCTCGACCTACGCGACTTGGTGGATTCGCCAAGCCATCACCCGCGCGATCGCGGATCAAAGCCGCACGATCCGCCTGCCTGTTCACCTCTACGAAACCATTTCTCGCATTAAGAAAACCACCAAGCTGCTTTCTCAGGAAATGGGTCGTAAGCCCACCGAGGAAGAGATCGCCACTCGCATGGAGATGACGATCGAGAAGCTGCGGTTTATCGCTAAGTCAGCCCAGCTGCCAATTTCGCTGGAAACCCCAATCGGTAAAGAAGAAGACTCGCGTCTGGGTGACTTCATCGAAGCTGATGGCGAAACCCCCGAAGATGAAGTCGCAAAAAACCTGCTGCGCGAAGACCTTGAAGGCGTCCTTAGCACTCTCAGCCCCCGCGAGCGCGATGTGCTGCGCCTGCGCTATGGCTTGGATGACGGCCGCATGAAAACGCTGGAAGAAATCGGCCAGTTGTTTAATGTCACCCGCGAACGCATCCGCCAGATCGAGGCGAAAGCACTGCGGAAACTGCGTCATCCCAACCGCAACAGCATCCTGAAAGAGTACATCCGCTAG
 Translation (399 aa)
                                >g0649
MTQLISIDKEQEEAGMTQATELLDPALKPAETKAKRSSRKKATTAVVEPATTIAPTADVDAIDDEDSVGEDEDAAAKAKAKVRKTYTEDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKLRHPNRNSILKEYIR