Guide Gene

Gene ID
slr2089
Organism
Synechocystis sp. PCC 6803
Platform ID
PCC6803
Description
Squalene-hopene-cyclase

    Coexpressed Gene List
    Coexpressed Gene Network

Summary

 Primary Transcript ID

slr2089

 Alias

shc

 Description

squalene-hopene-cyclase

Functional Annotation

 Gene Ontology

Biological Process

  • GO:0019746    hopanoid biosynthetic process    

Cellular Component

    -

Molecular Function

  • GO:0003824    catalytic activity    
  • GO:0016866    intramolecular transferase activity    
 Function Category
  • G:    Fatty acid, phospholipid and sterol metabolism

Sequence

 Nucleotide (1944 nt, CDS)
                                >slr2089
ATGGTTATTGCCGCCTCTCCCTCCGTTCCTTGTCCTAGCACCGAGCAGGTGCGCCAGGCGATCGCCGCTAGTCGGGACTTCCTGCTATCGGAACAATATGCCGATGGCTACTGGTGGTCTGAGTTGGAATCCAATGTCACCATCACTGCCGAAGTGGTCATACTGCACAAAATTTGGGGCACAGCGGCCCAAAGACCCCTGGAGAAGGCGAAGAATTACCTGTTGCAACAACAACGGGACCATGGCGGTTGGGAACTGTACTATGGTGATGGCGGTGAACTAAGTACCAGTGTGGAAGCCTACACTGCCCTGCGAATTTTGGGGGTTCCAGCCACCGATCCTGCCTTGGTCAAAGCGAAAAATTTCATTGTCGGCCGGGGGGGCATTAGCAAATCCCGCATTTTTACCAAAATGCATCTGGCGTTAATCGGTTGCTACGACTGGCGGGGTACTCCTTCCATTCCCCCCTGGGTGATGCTTTTGCCCAACAATTTTTTCTTTAACATTTACGAAATGTCCAGTTGGGCCCGTTCTAGTACGGTCCCCCTGATGATTGTTTGTGACCAAAAGCCCGTTTACGACATTGCCCAGGGTCTGCGGGTGGACGAACTCTATGCGGAAGGGATGGAAAATGTCCAGTATAAATTGCCGGAGAGTGGCACTATTTGGGATATTTTCATCGGTTTGGATAGCCTATTTAAGCTACAGGAACAAGCCAAGGTAGTACCTTTCCGAGAACAGGGTTTGGCCCTGGCGGAAAAGTGGATTTTAGAACGACAAGAAGTCAGTGGCGATTGGGGCGGCATTATTCCCGCTATGCTGAATTCCCTGCTGGCGTTGAAAGTGTTGGGCTATGACGTTAACGATCTCTATGTGCAAAGGGGCCTAGCGGCGATCGATAATTTCGCGGTGGAAACGGAAGATAGCTATGCCATTCAAGCCTGTGTTTCCCCTGTGTGGGATACGGCCTGGGTTGTGCGGGCTTTGGCGGAAGCGGATCTAGGTAAGGATCATCCCGCCTTGGTTAAAGCGGGGCAATGGTTGTTGGATAAACAAATTCTCACCTACGGCGATTGGCAGATCAAAAATCCCCACGGTGAACCGGGAGCTTGGGCGTTTGAATTTGATAATAATTTCTACCCTGACATTGACGACACCTGCGTGGTGATGATGGCGTTACAGGGCATTACCCTCCCCGATGAGGAACGTAAACAGGGGGCCATTAATAAGGCCTTGCAGTGGATAGCCACCATGCAATGTAAAACCGGAGGCTGGGCCGCCTTTGACATTGACAATGACCAAGATTGGCTTAACCAGTTACCCTACGGTGATTTGAAAGCCATGATTGACCCCAGCACCGCCGATATTACCGCCCGGGTGGTTGAAATGCTGGGAGCCTGTGGTTTGACCATGGATTCCCCACGAGTGGAACGGGGTTTGACCTATTTACTCCAAGAACAGGAACAGGATGGTAGTTGGTTCGGCCGCTGGGGCGTGAATTATCTCTATGGCACCAGCGGGGCCCTTTCTGCCCTAGCCATTTACGATGCCCAACGTTTTGCCCCCCAAATCAAAACGGCGATCGCCTGGTTGTTGAGCTGTCAAAATGCGGATGGGGGTTGGGGAGAAACCTGTGAAAGTTATAAAAACAAGCAGTTAAAGGGTCAAGGTAACAGCACTGCTTCCCAAACAGCCTGGGCCCTAATTGGTTTGTTAGATGCCCTCAAATATTTACCCAGCCTGGGACAAGATGCCAAACTAACCACGGCGATCGAGGGGGGCGTGGCTTTTCTTGTCCAGGGACAAACCCCCAAGGGCACCTGGGAAGAAGCAGAATATACCGGCACCGGTTTTCCCTGTCACTTTTATATCCGCTATCACTACTACCGCCAATATTTTCCCCTCATTGCCCTAGCTCGTTATAGCCATTTACAAGCATCTTAA
 Translation (647 aa)
                                >slr2089
MVIAASPSVPCPSTEQVRQAIAASRDFLLSEQYADGYWWSELESNVTITAEVVILHKIWGTAAQRPLEKAKNYLLQQQRDHGGWELYYGDGGELSTSVEAYTALRILGVPATDPALVKAKNFIVGRGGISKSRIFTKMHLALIGCYDWRGTPSIPPWVMLLPNNFFFNIYEMSSWARSSTVPLMIVCDQKPVYDIAQGLRVDELYAEGMENVQYKLPESGTIWDIFIGLDSLFKLQEQAKVVPFREQGLALAEKWILERQEVSGDWGGIIPAMLNSLLALKVLGYDVNDLYVQRGLAAIDNFAVETEDSYAIQACVSPVWDTAWVVRALAEADLGKDHPALVKAGQWLLDKQILTYGDWQIKNPHGEPGAWAFEFDNNFYPDIDDTCVVMMALQGITLPDEERKQGAINKALQWIATMQCKTGGWAAFDIDNDQDWLNQLPYGDLKAMIDPSTADITARVVEMLGACGLTMDSPRVERGLTYLLQEQEQDGSWFGRWGVNYLYGTSGALSALAIYDAQRFAPQIKTAIAWLLSCQNADGGWGETCESYKNKQLKGQGNSTASQTAWALIGLLDALKYLPSLGQDAKLTTAIEGGVAFLVQGQTPKGTWEEAEYTGTGFPCHFYIRYHYYRQYFPLIALARYSHLQAS