Guide Gene

Gene ID
sll1594
Organism
Synechocystis sp. PCC 6803
Platform ID
PCC6803
Description
NdhF3 operon transcriptional regulator, LysR family protein

Coexpressed Gene List


Synechocystis sp. PCC 6803
Rank Gene ID Description MR PCC
Guide sll1594 NdhF3 operon transcriptional regulator, LysR family protein 0.00 1.0000
1 sll0520 NADH dehydrogenase subunit NdhI 2.45 0.8284
2 sll1732 NADH dehydrogenase subunit 5 (involved in low CO2-inducible, high affinity CO2 uptake) 6.48 0.7861
3 slr0616 Unknown protein 6.48 0.7625
4 sll1097 30S ribosomal protein S7 8.12 0.7871
5 slr1280 NADH dehydrogenase subunit NdhK 9.17 0.7764
6 slr2006 Hypothetical protein 9.49 0.7376
7 slr1356 30S ribosomal protein S1 15.81 0.7659
8 sll0223 NADH dehydrogenase subunit 2 16.73 0.7508
9 sll0519 NADH dehydrogenase subunit 1 16.73 0.7427
10 slr0116 Phycocyanobilin:ferredoxin oxidoreductase 17.55 0.7094
11 sll0219 Flavoprotein 19.42 0.6840
12 slr0041 Bicarbonate transport system permease protein 20.49 0.6694
13 slr1624 Hypothetical protein 21.35 0.6858
14 sll1810 50S ribosomal protein L6 24.00 0.7226
15 slr0042 Probable porin; major outer membrane protein 24.98 0.6544
16 sll0521 NADH dehydrogenase subunit 6 26.32 0.6910
17 slr0657 Aspartate kinase 26.50 0.7132
18 sll0218 Hypothetical protein 27.50 0.6470
19 sll1911 Hypothetical protein 27.50 0.6959
20 sll1812 30S ribosomal protein S5 28.00 0.6994
21 sll1811 50S ribosomal protein L18 28.72 0.7083
22 slr0044 Bicarbonate transport system ATP-binding protein 29.93 0.6261
23 sll1805 50S ribosomal protein L16 30.02 0.6974
24 sll0017 Glutamate-1-semialdehyde aminomutase 30.50 0.7294
25 ssl3432 30S ribosomal protein S19 30.51 0.6936
26 sll1735 Hypothetical protein 31.62 0.6935
27 sll1743 50S ribosomal protein L11 32.83 0.7230
28 slr2007 NADH dehydrogenase subunit 4 33.76 0.6821
29 sll1813 50S ribosomal protein L15 39.80 0.6883
30 slr0043 Bicarbonate transport system ATP-binding protein 42.43 0.5819
31 sll0576 Putative sugar-nucleotide epimerase/dehydratease 44.27 0.6842
32 slr1311 Photosystem II D1 protein 44.79 0.6205
33 sll1734 Protein involved in low CO2-inducible, high affinity CO2 uptake 46.04 0.6515
34 sll1260 30S ribosomal protein S2 46.45 0.6849
35 slr0040 Bicarbonate transport system substrate-binding protein 47.95 0.5415
36 sll1767 30S ribosomal protein S6 48.86 0.6788
37 sll1733 NADH dehydrogenase subunit 4 (involved in low CO2-inducible, high affinity CO2 uptake) 50.38 0.6389
38 sll0522 NADH dehydrogenase subunit 4L 50.50 0.6852
39 sll1803 50S ribosomal protein L22 50.60 0.6741
40 ssl3437 30S ribosomal protein S17 53.44 0.6710
41 sll0900 ATP phosphoribosyltransferase 54.26 0.6880
42 slr1281 NADH dehydrogenase subunit I 55.64 0.6681
43 sll1809 30S ribosomal protein S8 55.70 0.6733
44 sll1212 GDP-mannose 4,6-dehydratase 56.20 0.6845
45 sll5057 Probable glycosyltransferase 61.92 0.6268
46 ssl0601 30S ribosomal protein S21 62.74 0.6492
47 ssl2233 30S ribosomal protein S20 62.90 0.6405
48 sll1802 50S ribosomal protein L2 62.93 0.6409
49 ssr1789 CAB/ELIP/HLIP-related protein HliD 63.87 0.6372
50 slr2034 Putative homolog of plant HCF136, which is essential for stability or assembly of photosystem II 63.91 0.6452
51 sll1808 50S ribosomal protein L5 64.09 0.6611
52 sll1806 50S ribosomal protein L14 64.36 0.6546
53 slr0115 Response regulator for energy transfer from phycobilisomes to photosystems 65.25 0.5739
54 sll1807 50S ribosomal protein L24 66.41 0.6407
55 sll1815 Adenylate kinase 68.23 0.6360
56 sll1800 50S ribosomal protein L4 71.90 0.6264
57 slr1291 NADH dehydrogenase subunit 4 76.49 0.6324
58 sll5046 Unknown protein 78.36 0.6076
59 slr5055 Similar to UDP-N-acetyl-D-mannosaminuronic acid transferase 79.60 0.6034
60 slr1512 Sodium-dependent bicarbonate transporter 80.01 0.6154
61 sll1769 Hypothetical protein 80.41 0.6292
62 sll1029 Carbon dioxide concentrating mechanism protein CcmK 81.38 0.5961
63 sll1817 30S ribosomal protein S11 81.74 0.6306
64 sll1801 50S ribosomal protein L23 82.98 0.5888
65 ssl3436 50S ribosomal protein L29 83.79 0.6205
66 sll0814 Hypothetical protein 84.14 0.5426
67 sll1799 50S ribosomal protein L3 85.42 0.5970
68 slr1920 Unknown protein 90.07 0.5957
69 slr1992 Glutathione peroxidase-like NADPH peroxidase 92.41 0.6190
70 sll1261 Elongation factor TS 93.74 0.6303
71 slr1919 Hypothetical protein 94.11 0.5410
72 slr1510 Fatty acid/phospholipid synthesis protein PlsX 94.32 0.6159
73 sll1786 Putative deoxyribonuclease, tatD homolog 94.92 0.6164
74 sll0822 Hypothetical protein 98.12 0.6206
75 sll1745 50S ribosomal protein L10 99.87 0.5792
76 sll0529 Hypothetical protein 102.41 0.6256
77 sll1559 Soluble hydrogenase 42 kD subunit 103.25 0.5923
78 sll6055 Hypothetical protein 104.27 0.5104
79 sll5044 Unknown protein 105.00 0.5624
80 slr1255 Phytoene synthase 105.76 0.5792
81 slr5056 Probable glycosyltransferase 108.71 0.5675
82 slr1924 D-alanyl-D-alanine carboxypeptidase, periplasmic protein 108.89 0.5530
83 sll1109 Hypothetical protein 109.22 0.6048
84 sll5043 Probable glycosyltransferase 109.44 0.5617
85 sll1816 30S ribosomal protein S13 109.83 0.6020
86 ssl0546 Septum site-determining protein MinE 110.36 0.5843
87 sll1553 Phenylalanyl-tRNA synthetase 111.91 0.5406
88 sll1746 50S ribosomal protein L12 112.42 0.5822
89 sll1213 GDP-fucose synthetase 112.46 0.6164
90 ssl2542 High light-inducible polypeptide HliA, CAB/ELIP/HLIP superfamily 113.73 0.6158
91 ssr1399 30S ribosomal protein S18 115.26 0.5937
92 slr2010 Hypothetical protein 115.26 0.5816
93 sll0569 RecA gene product 116.23 0.6054
94 sll1835 Periplasmic protein, function unknown 118.07 0.6082
95 sll1818 RNA polymerase alpha subunit 120.17 0.5900
96 sll0086 Putative arsenical pump-driving ATPase 120.66 0.5655
97 sll1030 Carbon dioxide concentrating mechanism protein CcmL, putative carboxysome assembly protein 124.10 0.5735
98 sll1028 Carbon dioxide concentrating mechanism protein CcmK 124.88 0.5558
99 slr0009 Ribulose bisphosphate carboxylase large subunit 125.06 0.5492
100 sll1742 Transcription antitermination protein NusG 125.86 0.6024
101 slr1513 Periplasmic protein, function unknown 127.57 0.5655
102 slr0220 Glycyl-tRNA synthetase beta chain 129.92 0.5938
103 ssl5045 Unknown protein 130.32 0.5593
104 ssl1426 50S ribosomal protein L35 132.24 0.6105
105 slr0757 Circadian clock protein KaiB homolog 133.09 0.4968
106 sll1747 Chorismate synthase 135.09 0.5948
107 slr1463 Elongation factor EF-G 135.31 0.5807
108 slr1265 RNA polymerase gamma-subunit 136.84 0.5617
109 sll1242 Hypothetical protein 137.17 0.5891
110 sll0767 50S ribosomal protein L20 137.48 0.6002
111 ssl1633 High light-inducible polypeptide HliC, CAB/ELIP/HLIP superfamily 141.88 0.5606
112 sll1031 Carbon dioxide concentrating mechanism protein CcmM, putative carboxysome structural protein 142.72 0.5332
113 sll0829 Probable methyltransferase 145.33 0.5341
114 slr1030 Magnesium protoporphyrin IX chelatase subunit I 146.16 0.5765
115 slr0156 ClpB protein 147.65 0.5611
116 sll0286 Hypothetical protein YCF52 149.10 0.5451
117 sll0575 Probable lipopolysaccharide ABC transporter ATP binding subunit 153.05 0.5411
118 sll0027 NADH dehydrogenase subunit 4 (involved in constitutive, low affinity CO2 uptake) 154.00 0.5793
119 sll0555 Methionine aminopeptidase 161.07 0.5260
120 slr2011 Hypothetical protein 161.50 0.5386
121 slr1279 NADH dehydrogenase subunit 3 163.54 0.5875
122 slr1105 GTP-binding protein TypA/BipA homolog 164.86 0.5380
123 ssr1604 50S ribosomal protein L28 165.12 0.5774
124 sll0195 Probable ATP-dependent protease 165.43 0.5832
125 sll0735 Hypothetical protein 167.18 0.5663
126 slr5053 Unknown protein 167.64 0.5077
127 ssr1528 Hypothetical protein 170.02 0.5191
128 slr0915 Putative endonuclease [encoded in trnfM-intron: 2791054 - 2791708] 175.83 0.5348
129 slr0007 Probable sugar-phosphate nucleotidyltransferase 177.90 0.4811
130 slr0011 Possible Rubisco chaperonin 180.03 0.5154
131 sll1744 50S ribosomal protein L1 186.24 0.5473
132 sll0927 S-adenosylmethionine synthetase 187.35 0.5615
133 sll0689 Na+/H+ antiporter 188.43 0.5303
134 sll0518 Unknown protein 188.93 0.5767
135 slr1097 Hypothetical protein 190.13 0.5126
136 sll1820 TRNA pseudouridine synthase 1 192.35 0.5404
137 slr1789 Unknown protein 192.39 0.4706
138 sll1101 30S ribosomal protein S10 193.41 0.5578
139 ssl2009 Hypothetical protein 195.90 0.5079
140 slr0426 GTP cyclohydrolase I 196.29 0.5376
141 slr1046 Putative TatA protein 197.03 0.5438
142 sml0011 Hypothetical protein 200.45 0.4868
143 slr1330 ATP synthase epsilon chain of CF(1) 202.45 0.5285
144 slr1350 Acyl-lipid desaturase (delta 12) 204.67 0.5433
145 ssr1258 Hypothetical protein 204.98 0.5137
146 sll1814 Preprotein translocase SecY subunit 205.39 0.5374
147 slr0712 Hypothetical protein 206.38 0.4872
148 ssl2084 Acyl carrier protein 206.65 0.5002
149 sll1933 DnaJ protein, heat shock protein 40, molecular chaperone 206.83 0.5175
150 ssl2653 Unknown protein 209.94 0.4653
151 slr1160 Periplasmic protein, function unknown 210.90 0.5284
152 sll0661 Hypothetical protein YCF35 211.15 0.4809
153 slr1979 Anthranilate synthase component I 213.38 0.5220
154 sll1536 Molybdopterin biosynthesis MoeB protein 215.00 0.5239
155 sll2013 Hypothetical protein 217.60 0.5333
156 slr0077 Cysteine desulfurase 218.84 0.5099
157 ssr2799 50S ribosomal protein L27 219.60 0.5287
158 slr0083 RNA helicase Light 222.34 0.5086
159 slr0399 Chaperon-like protein for quinone binding in photosystem II 223.72 0.5371
160 sll2005 DNA gyrase B subunit [Contains: Ssp gyrB intein] 224.50 0.5074
161 sll1394 Peptide methionine sulfoxide reductase 224.87 0.4896
162 sll0933 Hypothetical protein 225.43 0.5261
163 sll1736 Hypothetical protein 229.76 0.4963
164 ssl1263 Hypothetical protein 229.76 0.4661
165 slr0287 Hypothetical protein 229.84 0.4779
166 sll1787 RNA polymerase beta subunit 230.08 0.4943
167 sll1323 ATP synthase subunit b' of CF(0) 230.29 0.4833
168 slr0941 Hypothetical protein 230.43 0.4848
169 slr0774 Protein-export membrane protein SecD 234.73 0.5259
170 slr0552 Hypothetical protein 235.81 0.4965
171 slr1238 Glutathione synthetase 236.22 0.4803
172 slr0171 Photosystem I assembly related protein Ycf37 237.46 0.4854
173 sll1663 Phycocyanin alpha phycocyanobilin lyase related protein 239.48 0.5082
174 sll1740 50S ribosomal protein L19 242.43 0.5252
175 slr0628 30S ribosomal protein S14 242.86 0.4919
176 slr0209 Unknown protein 242.89 0.4672
177 slr1795 Peptide methionine sulfoxide reductase 244.67 0.4725
178 slr1353 Hypothetical protein 250.58 0.4826
179 sll1770 Hypothetical protein 251.46 0.5104
180 slr0923 Hypothetical protein YCF65 252.82 0.5017
181 slr1176 Glucose-1-phosphate adenylyltransferase 253.16 0.4721
182 sll1824 50S ribosomal protein L25 253.60 0.5004
183 slr1887 Porphobilinogen deaminase (hydroxymethylbilane synthase, preuroporphyrinogen synthase) 255.15 0.4879
184 sll1819 50S ribosomal protein L17 258.91 0.4937
185 slr1331 Periplasmic processing protease 260.26 0.5039
186 ssl0564 Transcriptional regulator 261.07 0.5033
187 slr0550 Dihydrodipicolinate synthase 262.31 0.4821
188 sll1804 30S ribosomal protein S3 262.50 0.4886
189 slr0496 Unknown protein 263.02 0.4670
190 slr0193 RNA-binding protein 267.19 0.4637
191 slr0755 Hypothetical protein 267.49 0.4530
192 slr1974 GTP binding protein 272.63 0.4520
193 slr1342 Hypothetical protein 272.75 0.4888
194 sll1525 Phosphoribulokinase 273.07 0.4458
195 sll1526 Hypothetical protein 275.06 0.4728
196 sll1143 ATP-dependent helicase PcrA 275.76 0.4531
197 ssl2615 ATP synthase C chain of CF(0) 275.97 0.4530
198 slr1166 UDP-glucose:tetrahydrobiopterin glucosyltransferase 276.04 0.4693
199 sll1505 Hypothetical protein 276.93 0.4505
200 slr0075 ABC transporter ATP-binding protein 277.69 0.4776