Guide Gene

Gene ID
sll1028
Organism
Synechocystis sp. PCC 6803
Platform ID
PCC6803
Description
Carbon dioxide concentrating mechanism protein CcmK

Coexpressed Gene List


Synechocystis sp. PCC 6803
Rank Gene ID Description MR PCC
Guide sll1028 Carbon dioxide concentrating mechanism protein CcmK 0.00 1.0000
1 sll1031 Carbon dioxide concentrating mechanism protein CcmM, putative carboxysome structural protein 1.73 0.8946
2 sll1030 Carbon dioxide concentrating mechanism protein CcmL, putative carboxysome assembly protein 3.74 0.8724
3 slr1512 Sodium-dependent bicarbonate transporter 4.47 0.8448
4 sll1734 Protein involved in low CO2-inducible, high affinity CO2 uptake 4.58 0.8510
5 slr0011 Possible Rubisco chaperonin 5.48 0.8421
6 sll1029 Carbon dioxide concentrating mechanism protein CcmK 6.48 0.8415
7 slr0012 Ribulose bisphosphate carboxylase small subunit 7.94 0.8342
8 sll1735 Hypothetical protein 8.00 0.8254
9 slr1513 Periplasmic protein, function unknown 9.17 0.8032
10 slr0009 Ribulose bisphosphate carboxylase large subunit 10.49 0.8136
11 sll1746 50S ribosomal protein L12 11.00 0.8127
12 sll1813 50S ribosomal protein L15 13.08 0.8152
13 slr2034 Putative homolog of plant HCF136, which is essential for stability or assembly of photosystem II 13.49 0.7800
14 sll1732 NADH dehydrogenase subunit 5 (involved in low CO2-inducible, high affinity CO2 uptake) 13.96 0.7822
15 sll0289 Septum site-determining protein MinD 20.49 0.6988
16 ssr1399 30S ribosomal protein S18 22.45 0.7516
17 sll1767 30S ribosomal protein S6 22.58 0.7532
18 sll1814 Preprotein translocase SecY subunit 23.24 0.7798
19 sll0735 Hypothetical protein 24.33 0.7554
20 sll1322 ATP synthase A chain of CF(0) 24.68 0.7354
21 ssl2615 ATP synthase C chain of CF(0) 26.51 0.7494
22 sll1745 50S ribosomal protein L10 28.57 0.7155
23 sll1806 50S ribosomal protein L14 33.17 0.7409
24 slr1281 NADH dehydrogenase subunit I 34.58 0.7173
25 slr0713 TRNA-guanine transglycosylase 35.47 0.6837
26 slr1703 Seryl-tRNA synthetase 35.65 0.6955
27 slr1176 Glucose-1-phosphate adenylyltransferase 36.41 0.7134
28 sll1327 ATP synthase gamma chain 36.47 0.6888
29 sll0223 NADH dehydrogenase subunit 2 38.88 0.7046
30 slr2094 Fructose-1,6-/sedoheptulose-1,7-bisphosphatase 39.23 0.7067
31 slr1329 ATP synthase beta subunit 39.69 0.7146
32 sll1733 NADH dehydrogenase subunit 4 (involved in low CO2-inducible, high affinity CO2 uptake) 40.50 0.6771
33 slr2010 Hypothetical protein 43.37 0.6934
34 sll1810 50S ribosomal protein L6 44.54 0.6937
35 slr0575 Hypothetical protein 45.89 0.6823
36 slr1425 Hypothetical protein 47.05 0.6689
37 sll0576 Putative sugar-nucleotide epimerase/dehydratease 51.94 0.6831
38 slr0756 Circadian clock protein KaiA homolog 52.65 0.6676
39 sll1101 30S ribosomal protein S10 53.58 0.6991
40 slr0115 Response regulator for energy transfer from phycobilisomes to photosystems 56.28 0.5923
41 sll1908 D-3-phosphoglycerate dehydrogenase 56.67 0.7235
42 slr0616 Unknown protein 58.86 0.5914
43 sll1807 50S ribosomal protein L24 60.10 0.6687
44 sll1815 Adenylate kinase 60.16 0.6579
45 sll1803 50S ribosomal protein L22 60.46 0.6677
46 sll1910 Protein conferring resistance to acetazolamide Zam 60.79 0.6573
47 sll0286 Hypothetical protein YCF52 62.34 0.6432
48 sll0767 50S ribosomal protein L20 67.35 0.6882
49 slr2009 NADH dehydrogenase subunit 4 68.48 0.6345
50 sll0555 Methionine aminopeptidase 68.88 0.6353
51 sll1809 30S ribosomal protein S8 69.17 0.6623
52 sll1323 ATP synthase subunit b' of CF(0) 69.64 0.6544
53 sml0005 Photosystem II PsbK protein 70.21 0.6920
54 ssl3436 50S ribosomal protein L29 70.60 0.6491
55 ssl3437 30S ribosomal protein S17 71.06 0.6525
56 slr0156 ClpB protein 75.26 0.6388
57 sll1811 50S ribosomal protein L18 75.27 0.6504
58 sll1643 Hypothetical protein 75.46 0.6172
59 sll1032 Carbon dioxide concentrating mechanism protein CcmN, putative carboxysome assembly protein 77.36 0.6012
60 sll0829 Probable methyltransferase 80.37 0.6045
61 sll1499 Ferredoxin-dependent glutamate synthase 81.02 0.5874
62 slr1652 Hypothetical protein 83.14 0.5506
63 sll1237 N(5)-glutamine methyltransferase 83.16 0.6184
64 sll1808 50S ribosomal protein L5 85.42 0.6441
65 slr0649 Methionyl-tRNA synthetase 86.59 0.6559
66 sll1522 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 87.89 0.6184
67 sll1109 Hypothetical protein 88.03 0.6369
68 slr1920 Unknown protein 89.33 0.6078
69 sll1260 30S ribosomal protein S2 91.75 0.6315
70 sll0649 Two-component response regulator OmpR subfamily 92.95 0.6249
71 sll1572 DNA polymerase III alpha subunit [Contains: Ssp dnaE intein] 93.07 0.6379
72 slr1177 Hypothetical protein 94.04 0.5625
73 slr1031 Tyrosyl tRNA synthetase 94.39 0.6506
74 slr1511 3-oxoacyl-[acyl-carrier-protein] synthase III 97.28 0.5860
75 sll1805 50S ribosomal protein L16 98.17 0.6171
76 slr0864 ATP-binding protein of ABC transporter 98.82 0.6624
77 slr1506 Hypothetical protein 99.41 0.6087
78 sll1736 Hypothetical protein 100.28 0.6005
79 sml0011 Hypothetical protein 101.35 0.5833
80 sml0001 Photosystem II reaction center PsbI protein 102.00 0.6322
81 sll1994 Porphobilinogen synthase (5-aminolevulinate dehydratase) 104.00 0.6522
82 sll1800 50S ribosomal protein L4 104.31 0.5972
83 slr0007 Probable sugar-phosphate nucleotidyltransferase 105.74 0.5652
84 slr1822 Endonuclease III 106.75 0.6519
85 slr1265 RNA polymerase gamma-subunit 109.78 0.5976
86 slr1356 30S ribosomal protein S1 110.08 0.6246
87 ssl3441 Initiation factor IF-1 111.00 0.5817
88 ssl2065 Unknown protein 115.66 0.5985
89 slr1020 Sulfolipid biosynthesis protein SqdB 116.31 0.6080
90 smr0004 Photosystem I subunit VIII 120.37 0.6273
91 sll1820 TRNA pseudouridine synthase 1 120.47 0.6087
92 sll1802 50S ribosomal protein L2 120.86 0.5825
93 slr1255 Phytoene synthase 122.47 0.5736
94 sll1526 Hypothetical protein 122.68 0.6028
95 sll1594 NdhF3 operon transcriptional regulator, LysR family protein 124.88 0.5558
96 sll1799 50S ribosomal protein L3 125.00 0.5688
97 ssr2799 50S ribosomal protein L27 125.54 0.6144
98 sll1317 Apocytochrome f, component of cytochrome b6/f complex 126.93 0.5840
99 ssl3432 30S ribosomal protein S19 127.23 0.5787
100 sll0676 Hypothetical protein 127.75 0.6385
101 slr0111 Unknown protein 130.28 0.5114
102 sll7063 Unknown protein 130.58 0.6014
103 sll1804 30S ribosomal protein S3 131.45 0.5990
104 slr0906 Photosystem II core light harvesting protein 132.42 0.6362
105 slr1330 ATP synthase epsilon chain of CF(1) 133.99 0.5955
106 ssl1923 Hypothetical protein 134.26 0.5861
107 slr1072 GDP-D-mannose dehydratase 135.47 0.6372
108 slr0731 Hypothetical protein 138.87 0.5943
109 slr1238 Glutathione synthetase 140.65 0.5676
110 sll1471 Phycobilisome rod-core linker polypeptide 142.39 0.5198
111 sll0219 Flavoprotein 142.65 0.4521
112 sll1110 Peptide chain release factor 1 144.00 0.5831
113 sll0520 NADH dehydrogenase subunit NdhI 144.31 0.5763
114 ssr2061 Glutaredoxin 145.31 0.5864
115 sll7089 Unknown protein 147.55 0.5706
116 smr0008 Photosystem II PsbJ protein 147.62 0.6182
117 slr1071 Unknown protein 149.14 0.6353
118 sll1821 50S ribosomal protein L13 149.48 0.5919
119 sll1099 Elongation factor Tu 152.60 0.6253
120 slr1911 Hypothetical protein 152.97 0.5875
121 ssl3093 Phycobilisome small rod linker polypeptide 153.92 0.5782
122 slr0041 Bicarbonate transport system permease protein 154.70 0.4813
123 ssr1258 Hypothetical protein 155.03 0.5717
124 sll0522 NADH dehydrogenase subunit 4L 155.21 0.5820
125 slr1463 Elongation factor EF-G 156.57 0.5744
126 sll6055 Hypothetical protein 157.01 0.4869
127 sll1559 Soluble hydrogenase 42 kD subunit 157.19 0.5516
128 smr0007 Photosystem II PsbL protein 157.27 0.5921
129 ssl2653 Unknown protein 157.71 0.5195
130 slr0912 Unknown protein 159.08 0.6237
131 ssr3383 Phycobilisome small core linker polypeptide 159.46 0.5376
132 ssr1528 Hypothetical protein 160.46 0.5374
133 sll0862 Hypothetical protein 164.21 0.4529
134 slr0625 Hypothetical protein 166.85 0.5779
135 slr1986 Allophycocyanin beta subunit 169.95 0.5309
136 slr1030 Magnesium protoporphyrin IX chelatase subunit I 172.02 0.5666
137 slr2007 NADH dehydrogenase subunit 4 173.35 0.5353
138 sll0146 Integral membrane protein of the ABC-type, Nat permease for neutral amino acids 173.46 0.5757
139 slr1655 Photosystem I subunit XI 175.56 0.5611
140 sll0822 Hypothetical protein 176.69 0.5659
141 sll1321 Hypothetical protein 176.87 0.5366
142 slr1789 Unknown protein 178.57 0.5017
143 slr0042 Probable porin; major outer membrane protein 178.91 0.4675
144 slr0590 Hypothetical protein 179.81 0.4924
145 sll1536 Molybdopterin biosynthesis MoeB protein 186.63 0.5601
146 slr1666 Pleiotropic regulatory protein homolog 186.63 0.4829
147 ssr1038 Unknown protein 186.68 0.5138
148 sll1428 Probable sodium-dependent transporter 187.83 0.5143
149 sll1579 Phycobilisome rod linker polypeptide 188.94 0.5294
150 sll1787 RNA polymerase beta subunit 189.50 0.5447
151 sll0427 Photosystem II manganese-stabilizing polypeptide 190.44 0.4955
152 sll1812 30S ribosomal protein S5 191.41 0.5248
153 sll1695 Pilin polypeptide PilA2 191.48 0.5733
154 sll0017 Glutamate-1-semialdehyde aminomutase 191.58 0.5701
155 slr0213 GMP synthetase 191.89 0.5539
156 slr1097 Hypothetical protein 192.82 0.5297
157 ssr1789 CAB/ELIP/HLIP-related protein HliD 192.85 0.5330
158 sll1084 Hypothetical protein 192.94 0.5187
159 slr1763 Probable methyltransferase 195.71 0.5289
160 slr1407 Unknown protein 196.10 0.5418
161 sll1945 1-deoxyxylulose-5-phosphate synthase 197.81 0.5497
162 sll0284 Hypothetical protein 198.75 0.5616
163 slr7088 Hypothetical protein 199.22 0.5849
164 sll2005 DNA gyrase B subunit [Contains: Ssp gyrB intein] 199.28 0.5418
165 smr0006 Cytochrome b559 b subunit 199.67 0.5565
166 ssr1175 Putative transposase [ISY100v: 3095975 - 3096319, join 3097194 - 3097362, join 3098314 - 3098743] 200.08 0.5556
167 ssr7084 Unknown protein 201.41 0.5803
168 ssl3445 50S ribosomal protein L31 201.43 0.5665
169 sll1801 50S ribosomal protein L23 202.34 0.4958
170 slr2067 Allophycocyanin alpha subunit 202.70 0.4969
171 slr0171 Photosystem I assembly related protein Ycf37 203.22 0.5263
172 slr2011 Hypothetical protein 207.55 0.5212
173 slr0394 Phosphoglycerate kinase 207.73 0.4952
174 sll0027 NADH dehydrogenase subunit 4 (involved in constitutive, low affinity CO2 uptake) 209.07 0.5536
175 sll0849 Photosystem II reaction center D2 protein 211.81 0.5128
176 sll0258 Cytochrome c550 214.43 0.5084
177 sll0851 Photosystem II CP43 protein 215.04 0.5651
178 sll0922 Unknown protein 216.63 0.5814
179 sll0145 Ribosome releasing factor 218.24 0.5184
180 slr0238 Hypothetical protein 221.46 0.5207
181 slr0755 Hypothetical protein 221.50 0.5018
182 sll1377 Probable glycosyltransferase 223.91 0.5204
183 ssr1604 50S ribosomal protein L28 226.62 0.5450
184 sll0521 NADH dehydrogenase subunit 6 231.43 0.4922
185 slr0875 Large-conductance mechanosensitive channel 231.76 0.5055
186 slr2008 Hypothetical protein 233.38 0.5205
187 slr0040 Bicarbonate transport system substrate-binding protein 234.74 0.3715
188 slr0900 Molybdopterin biosynthesis MoeA protein 234.77 0.5033
189 slr1678 50S ribosomal protein L21 234.85 0.5030
190 ssr1513 Hypothetical protein 234.94 0.5157
191 sll1771 Protein serin-threonin phosphatase 238.70 0.5400
192 sll7064 Unknown protein 238.92 0.5070
193 sll7085 Unknown protein 239.24 0.5320
194 sll1819 50S ribosomal protein L17 239.78 0.5246
195 ssl0563 Photosystem I subunit VII 242.29 0.5137
196 sll1097 30S ribosomal protein S7 245.80 0.5181
197 ssr0550 Hypothetical protein 247.42 0.3471
198 ssl0020 Ferredoxin I, essential for growth 247.73 0.4784
199 slr0909 Unknown protein 249.12 0.5514
200 sll1525 Phosphoribulokinase 250.36 0.4828