Guide Gene

Gene ID
slr0009
Organism
Synechocystis sp. PCC 6803
Platform ID
PCC6803
Description
Ribulose bisphosphate carboxylase large subunit

    Coexpressed Gene Network
    Gene Information

Coexpressed Gene List


Synechocystis sp. PCC 6803
Rank Gene ID Description MR PCC
Guide slr0009 Ribulose bisphosphate carboxylase large subunit 0.00 1.0000
1 slr0011 Possible Rubisco chaperonin 1.00 0.9623
2 slr0012 Ribulose bisphosphate carboxylase small subunit 2.00 0.9182
3 sll1029 Carbon dioxide concentrating mechanism protein CcmK 4.47 0.8687
4 sll1322 ATP synthase A chain of CF(0) 4.47 0.8533
5 sll1030 Carbon dioxide concentrating mechanism protein CcmL, putative carboxysome assembly protein 4.90 0.8716
6 slr2034 Putative homolog of plant HCF136, which is essential for stability or assembly of photosystem II 5.48 0.8431
7 ssl2615 ATP synthase C chain of CF(0) 7.48 0.8349
8 sll1910 Protein conferring resistance to acetazolamide Zam 7.75 0.8003
9 slr0007 Probable sugar-phosphate nucleotidyltransferase 8.00 0.7647
10 sll1031 Carbon dioxide concentrating mechanism protein CcmM, putative carboxysome structural protein 8.94 0.8288
11 sll1746 50S ribosomal protein L12 9.00 0.8242
12 sll1028 Carbon dioxide concentrating mechanism protein CcmK 10.49 0.8136
13 slr1176 Glucose-1-phosphate adenylyltransferase 10.49 0.8219
14 ssl2653 Unknown protein 13.42 0.7254
15 sml0011 Hypothetical protein 14.39 0.7343
16 sll1745 50S ribosomal protein L10 15.43 0.7746
17 sll1525 Phosphoribulokinase 15.49 0.7674
18 slr1177 Hypothetical protein 18.73 0.7065
19 sll1260 30S ribosomal protein S2 20.71 0.7748
20 sll1734 Protein involved in low CO2-inducible, high affinity CO2 uptake 21.35 0.7488
21 sll1425 Proline-tRNA ligase 21.63 0.6752
22 slr2094 Fructose-1,6-/sedoheptulose-1,7-bisphosphatase 21.82 0.7554
23 slr0476 Unknown protein 22.49 0.6871
24 ssr1399 30S ribosomal protein S18 25.30 0.7457
25 sll0427 Photosystem II manganese-stabilizing polypeptide 25.51 0.7222
26 sll1803 50S ribosomal protein L22 25.81 0.7495
27 sll1499 Ferredoxin-dependent glutamate synthase 25.92 0.7151
28 slr1512 Sodium-dependent bicarbonate transporter 26.46 0.7287
29 slr0713 TRNA-guanine transglycosylase 28.98 0.7108
30 sll1323 ATP synthase subunit b' of CF(0) 29.39 0.7324
31 sll1327 ATP synthase gamma chain 29.85 0.7123
32 slr1329 ATP synthase beta subunit 30.40 0.7410
33 slr1506 Hypothetical protein 30.74 0.7288
34 sll1767 30S ribosomal protein S6 31.22 0.7322
35 slr1789 Unknown protein 31.97 0.6547
36 sll0735 Hypothetical protein 32.16 0.7373
37 sll1732 NADH dehydrogenase subunit 5 (involved in low CO2-inducible, high affinity CO2 uptake) 32.31 0.7088
38 slr2067 Allophycocyanin alpha subunit 33.05 0.7007
39 slr0710 Glutamate dehydrogenase (NADP+) 33.47 0.6633
40 sll1800 50S ribosomal protein L4 33.63 0.7268
41 slr0575 Hypothetical protein 36.33 0.7058
42 sll1805 50S ribosomal protein L16 38.68 0.7110
43 ssl3436 50S ribosomal protein L29 39.89 0.7087
44 ssl3432 30S ribosomal protein S19 39.95 0.7082
45 sll1806 50S ribosomal protein L14 41.74 0.7291
46 sll1799 50S ribosomal protein L3 42.99 0.6913
47 sll0289 Septum site-determining protein MinD 43.16 0.6636
48 sll1032 Carbon dioxide concentrating mechanism protein CcmN, putative carboxysome assembly protein 43.63 0.6712
49 ssl1911 Glutamine synthetase inactivating factor IF7 44.25 0.6250
50 sll1802 50S ribosomal protein L2 44.82 0.7048
51 slr2011 Hypothetical protein 45.99 0.6901
52 sll1733 NADH dehydrogenase subunit 4 (involved in low CO2-inducible, high affinity CO2 uptake) 47.62 0.6742
53 ssr1038 Unknown protein 48.66 0.6524
54 ssl3441 Initiation factor IF-1 49.60 0.6692
55 sll1811 50S ribosomal protein L18 51.22 0.6948
56 sll1735 Hypothetical protein 51.30 0.6859
57 slr0335 Phycobilisome core-membrane linker polypeptide 51.50 0.6439
58 slr0616 Unknown protein 52.76 0.6056
59 ssr3383 Phycobilisome small core linker polypeptide 52.96 0.6725
60 sll0258 Cytochrome c550 54.08 0.6666
61 sll0286 Hypothetical protein YCF52 56.12 0.6667
62 slr1513 Periplasmic protein, function unknown 56.78 0.6681
63 sll1316 Cytochrome b6-f complex iron-sulfur subunit (Rieske iron sulfur protein) 56.95 0.5458
64 sll1810 50S ribosomal protein L6 57.13 0.6851
65 sll1812 30S ribosomal protein S5 57.45 0.6790
66 ssl3437 30S ribosomal protein S17 61.85 0.6781
67 slr1986 Allophycocyanin beta subunit 61.97 0.6667
68 sll1635 Thy1 protein homolog 63.97 0.5635
69 slr2010 Hypothetical protein 65.07 0.6706
70 sll1807 50S ribosomal protein L24 65.92 0.6744
71 slr2009 NADH dehydrogenase subunit 4 67.08 0.6510
72 sll1326 ATP synthase alpha chain 69.46 0.6572
73 sll1321 Hypothetical protein 69.97 0.6636
74 sll1435 Glutamyl-tRNA(Gln) amidotransferase subunit B 73.44 0.6107
75 sll1813 50S ribosomal protein L15 74.90 0.6658
76 slr2087 C-type cytochrome biogenesis protein Ccs1 75.24 0.5288
77 slr1920 Unknown protein 75.76 0.6366
78 sml0001 Photosystem II reaction center PsbI protein 76.81 0.6700
79 smr0007 Photosystem II PsbL protein 78.57 0.6826
80 slr2007 NADH dehydrogenase subunit 4 79.84 0.6303
81 slr1703 Seryl-tRNA synthetase 80.42 0.6506
82 sll1522 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 81.00 0.6387
83 smr0006 Cytochrome b559 b subunit 82.70 0.6712
84 slr2033 Membrane-associated rubredoxin, essential for photosystem I assembly 83.16 0.6178
85 sll1808 50S ribosomal protein L5 83.47 0.6654
86 sll0576 Putative sugar-nucleotide epimerase/dehydratease 83.62 0.6506
87 slr0111 Unknown protein 84.23 0.5530
88 sll1317 Apocytochrome f, component of cytochrome b6/f complex 86.63 0.6398
89 sll1814 Preprotein translocase SecY subunit 90.75 0.6690
90 sll1801 50S ribosomal protein L23 91.51 0.5933
91 slr1463 Elongation factor EF-G 93.07 0.6574
92 sll0649 Two-component response regulator OmpR subfamily 95.12 0.6349
93 slr1425 Hypothetical protein 95.34 0.6198
94 slr0728 Hypothetical protein 98.71 0.5061
95 sll1515 Glutamine synthetase inactivating factor IF17 99.20 0.5649
96 sll0521 NADH dehydrogenase subunit 6 99.44 0.6001
97 ssl3093 Phycobilisome small rod linker polypeptide 102.47 0.6321
98 slr1908 Probable porin; major outer membrane protein 103.40 0.5514
99 sll0849 Photosystem II reaction center D2 protein 104.92 0.6014
100 sll0522 NADH dehydrogenase subunit 4L 105.45 0.6397
101 sll0520 NADH dehydrogenase subunit NdhI 105.53 0.6280
102 sll1577 Phycocyanin beta subunit 108.00 0.5904
103 sll1809 30S ribosomal protein S8 108.19 0.6279
104 sll0219 Flavoprotein 108.25 0.4700
105 ssr1562 Hypothetical protein 111.43 0.4912
106 slr1097 Hypothetical protein 112.57 0.6017
107 slr0171 Photosystem I assembly related protein Ycf37 113.25 0.6056
108 sll0555 Methionine aminopeptidase 116.00 0.5780
109 sll1559 Soluble hydrogenase 42 kD subunit 120.95 0.5852
110 sll0529 Hypothetical protein 123.03 0.6289
111 slr1020 Sulfolipid biosynthesis protein SqdB 123.40 0.6105
112 sll1579 Phycobilisome rod linker polypeptide 124.27 0.5765
113 sll1594 NdhF3 operon transcriptional regulator, LysR family protein 125.06 0.5492
114 sll1643 Hypothetical protein 127.98 0.5611
115 sll1341 Bacterioferritin 128.37 0.4803
116 slr0452 Dihydroxyacid dehydratase 131.91 0.5485
117 sll0223 NADH dehydrogenase subunit 2 134.46 0.5798
118 sll1815 Adenylate kinase 135.68 0.5747
119 slr1280 NADH dehydrogenase subunit NdhK 135.81 0.5773
120 slr1459 Phycobilisome core component 136.13 0.5164
121 sll2005 DNA gyrase B subunit [Contains: Ssp gyrB intein] 136.62 0.6003
122 slr0342 Cytochrome b6 136.93 0.5624
123 sll1414 Hypothetical protein 138.87 0.5420
124 slr1356 30S ribosomal protein S1 141.07 0.6016
125 slr1887 Porphobilinogen deaminase (hydroxymethylbilane synthase, preuroporphyrinogen synthase) 144.37 0.5887
126 sml0005 Photosystem II PsbK protein 149.83 0.6143
127 sll1578 Phycocyanin alpha subunit 150.15 0.5501
128 slr1209 Hypothetical protein 151.31 0.5433
129 sll1101 30S ribosomal protein S10 151.62 0.6055
130 sll1261 Elongation factor TS 151.95 0.5984
131 slr0193 RNA-binding protein 152.12 0.5507
132 ssr0692 Hypothetical protein 154.01 0.5031
133 sll1536 Molybdopterin biosynthesis MoeB protein 154.50 0.5861
134 sll1377 Probable glycosyltransferase 154.93 0.5595
135 sll0017 Glutamate-1-semialdehyde aminomutase 156.84 0.6040
136 slr0006 Unknown protein 160.49 0.5238
137 sll1325 ATP synthase delta chain of CF(1) 162.85 0.5518
138 slr1655 Photosystem I subunit XI 163.90 0.5674
139 sll1324 ATP synthase B chain (subunit I) of CF(0) 164.27 0.5515
140 sll1526 Hypothetical protein 167.51 0.5656
141 slr1678 50S ribosomal protein L21 169.26 0.5342
142 sll0297 Hypothetical protein 170.00 0.5113
143 slr0739 Geranylgeranyl pyrophosphate synthase 170.62 0.5449
144 slr1649 Hypothetical protein 171.16 0.5269
145 slr1281 NADH dehydrogenase subunit I 174.17 0.5544
146 slr1867 Anthranilate phosphoribosyltransferase 177.58 0.5723
147 ssr3572 Hypothetical protein 177.70 0.5797
148 sll0767 50S ribosomal protein L20 177.72 0.5811
149 slr2057 Water channel protein 178.49 0.4128
150 sll0027 NADH dehydrogenase subunit 4 (involved in constitutive, low affinity CO2 uptake) 181.00 0.5705
151 slr0789 Hypothetical protein 182.15 0.5464
152 sll1070 Transketolase 182.30 0.5503
153 sll1994 Porphobilinogen synthase (5-aminolevulinate dehydratase) 185.30 0.5949
154 sll1532 Hypothetical protein 185.86 0.5397
155 slr1210 Unknown protein 188.77 0.5318
156 slr0904 Competence protein ComM homolog 195.10 0.4446
157 smr0008 Photosystem II PsbJ protein 197.10 0.5841
158 slr0756 Circadian clock protein KaiA homolog 198.79 0.5365
159 sll1084 Hypothetical protein 199.23 0.5027
160 slr0711 Hypothetical protein 199.29 0.4553
161 sll1097 30S ribosomal protein S7 199.74 0.5448
162 slr1624 Hypothetical protein 202.50 0.4819
163 slr1838 Carbon dioxide concentrating mechanism protein CcmK homolog 3, putative carboxysome assembly protein 202.58 0.5293
164 sll1394 Peptide methionine sulfoxide reductase 203.29 0.5130
165 slr0731 Hypothetical protein 204.70 0.5404
166 slr0353 Unknown protein 204.82 0.4978
167 ssl0563 Photosystem I subunit VII 207.31 0.5250
168 slr0041 Bicarbonate transport system permease protein 209.13 0.4140
169 ssl2009 Hypothetical protein 209.58 0.5054
170 slr0506 Light-dependent NADPH-protochlorophyllide oxidoreductase 212.07 0.4618
171 sll1931 Serine hydroxymethyltransferase 213.01 0.4615
172 ssr2848 Unknown protein 213.25 0.5193
173 slr0757 Circadian clock protein KaiB homolog 213.99 0.4382
174 sll1471 Phycobilisome rod-core linker polypeptide 214.94 0.4587
175 sll7089 Unknown protein 214.94 0.5158
176 slr1511 3-oxoacyl-[acyl-carrier-protein] synthase III 215.47 0.4756
177 sll0019 1-deoxy-d-xylulose 5-phosphate reductoisomerase 215.87 0.4849
178 slr0774 Protein-export membrane protein SecD 215.97 0.5484
179 ssr1528 Hypothetical protein 216.32 0.4928
180 sll1282 Riboflavin synthase beta subunit 216.92 0.5063
181 sll0218 Hypothetical protein 218.03 0.4187
182 sll1580 Phycobilisome rod linker polypeptide 218.31 0.5126
183 slr1761 FKBP-type peptidyl-prolyl cis-trans isomerase, periplasmic protein 218.33 0.4771
184 sll1281 Photosystem II PsbZ protein 222.67 0.5025
185 slr1634 Hypothetical protein 225.01 0.4905
186 slr0013 Hypothetical protein 225.41 0.5346
187 sll1686 Hypothetical protein 225.66 0.4788
188 slr1330 ATP synthase epsilon chain of CF(1) 225.90 0.5195
189 ssl2084 Acyl carrier protein 226.96 0.4956
190 slr1470 Hypothetical protein 226.98 0.5200
191 slr1265 RNA polymerase gamma-subunit 228.37 0.4983
192 slr0825 Probable peptidase 229.11 0.5000
193 sll0851 Photosystem II CP43 protein 232.53 0.5472
194 sll1804 30S ribosomal protein S3 234.61 0.5226
195 slr1098 Hypothetical protein 235.13 0.5272
196 slr0922 Peptidyl-tRNA hydrolase 235.69 0.4836
197 sll0807 Pentose-5-phosphate-3-epimerase 240.90 0.5260
198 sll7086 Unknown protein 240.90 0.4974
199 ssr1274 Unknown protein 241.38 0.4556
200 slr2006 Hypothetical protein 243.78 0.4750