Guide Gene

Gene ID
sll1733
Organism
Synechocystis sp. PCC 6803
Platform ID
PCC6803
Description
NADH dehydrogenase subunit 4 (involved in low CO2-inducible, high affinity CO2 uptake)

    Coexpressed Gene Network
    Gene Information

Coexpressed Gene List


Synechocystis sp. PCC 6803
Rank Gene ID Description MR PCC
Guide sll1733 NADH dehydrogenase subunit 4 (involved in low CO2-inducible, high affinity CO2 uptake) 0.00 1.0000
1 sll1734 Protein involved in low CO2-inducible, high affinity CO2 uptake 1.73 0.9079
2 sll1732 NADH dehydrogenase subunit 5 (involved in low CO2-inducible, high affinity CO2 uptake) 2.00 0.8957
3 sll1735 Hypothetical protein 3.46 0.8701
4 sll0223 NADH dehydrogenase subunit 2 5.29 0.8583
5 sll0521 NADH dehydrogenase subunit 6 6.32 0.7906
6 slr1512 Sodium-dependent bicarbonate transporter 7.35 0.8017
7 slr2010 Hypothetical protein 8.06 0.8096
8 slr0616 Unknown protein 9.22 0.7636
9 sll0218 Hypothetical protein 9.90 0.7762
10 sll0219 Flavoprotein 10.82 0.7833
11 slr1280 NADH dehydrogenase subunit NdhK 11.31 0.7961
12 sll1815 Adenylate kinase 11.83 0.7998
13 slr1624 Hypothetical protein 12.00 0.7308
14 slr0041 Bicarbonate transport system permease protein 13.42 0.7416
15 sll1809 30S ribosomal protein S8 15.00 0.7914
16 sll1807 50S ribosomal protein L24 16.25 0.7850
17 slr0007 Probable sugar-phosphate nucleotidyltransferase 17.23 0.7207
18 sll1811 50S ribosomal protein L18 18.33 0.7848
19 slr0042 Probable porin; major outer membrane protein 21.91 0.6822
20 sll1808 50S ribosomal protein L5 22.91 0.7721
21 sll1813 50S ribosomal protein L15 22.98 0.7649
22 slr0044 Bicarbonate transport system ATP-binding protein 23.22 0.6581
23 sll1810 50S ribosomal protein L6 25.10 0.7624
24 sll1805 50S ribosomal protein L16 26.53 0.7345
25 sll1317 Apocytochrome f, component of cytochrome b6/f complex 27.39 0.7245
26 ssl3437 30S ribosomal protein S17 28.98 0.7386
27 slr1513 Periplasmic protein, function unknown 29.98 0.7023
28 sll1806 50S ribosomal protein L14 30.20 0.7570
29 sll0520 NADH dehydrogenase subunit NdhI 31.45 0.7343
30 slr0043 Bicarbonate transport system ATP-binding protein 31.70 0.6169
31 slr0040 Bicarbonate transport system substrate-binding protein 33.44 0.5634
32 sll1326 ATP synthase alpha chain 34.87 0.7014
33 sll1031 Carbon dioxide concentrating mechanism protein CcmM, putative carboxysome structural protein 35.41 0.7011
34 slr1281 NADH dehydrogenase subunit I 35.69 0.7208
35 slr0926 4-hydroxybenzoate-octaprenyl transferase 37.00 0.6894
36 sll1803 50S ribosomal protein L22 38.16 0.7160
37 ssl3436 50S ribosomal protein L29 38.34 0.7037
38 sll1028 Carbon dioxide concentrating mechanism protein CcmK 40.50 0.6771
39 slr2009 NADH dehydrogenase subunit 4 41.42 0.6836
40 sll1327 ATP synthase gamma chain 42.47 0.6737
41 slr0738 Anthranilate synthetase alpha-subunit 43.07 0.6421
42 sll1812 30S ribosomal protein S5 43.27 0.6919
43 slr2007 NADH dehydrogenase subunit 4 43.50 0.6742
44 sll0522 NADH dehydrogenase subunit 4L 46.01 0.7142
45 ssl2615 ATP synthase C chain of CF(0) 46.58 0.6934
46 sll1263 Cation efflux system protein 47.15 0.5098
47 slr0009 Ribulose bisphosphate carboxylase large subunit 47.62 0.6742
48 sll0519 NADH dehydrogenase subunit 1 50.16 0.6955
49 sll1594 NdhF3 operon transcriptional regulator, LysR family protein 50.38 0.6389
50 slr2057 Water channel protein 54.48 0.5307
51 sll1323 ATP synthase subunit b' of CF(0) 59.62 0.6683
52 slr1265 RNA polymerase gamma-subunit 60.40 0.6582
53 slr0011 Possible Rubisco chaperonin 62.16 0.6681
54 slr2011 Hypothetical protein 63.28 0.6495
55 sll1324 ATP synthase B chain (subunit I) of CF(0) 65.95 0.6525
56 sll1212 GDP-mannose 4,6-dehydratase 67.25 0.6839
57 sll1032 Carbon dioxide concentrating mechanism protein CcmN, putative carboxysome assembly protein 68.35 0.6036
58 slr0739 Geranylgeranyl pyrophosphate synthase 69.20 0.6309
59 sll1029 Carbon dioxide concentrating mechanism protein CcmK 71.94 0.6116
60 slr0712 Hypothetical protein 72.97 0.6031
61 sll1322 ATP synthase A chain of CF(0) 75.78 0.6177
62 sll1261 Elongation factor TS 76.95 0.6651
63 ssl3432 30S ribosomal protein S19 78.35 0.6251
64 sll1030 Carbon dioxide concentrating mechanism protein CcmL, putative carboxysome assembly protein 79.37 0.6279
65 sll1325 ATP synthase delta chain of CF(1) 79.65 0.6258
66 sll1260 30S ribosomal protein S2 79.87 0.6363
67 sll0027 NADH dehydrogenase subunit 4 (involved in constitutive, low affinity CO2 uptake) 88.05 0.6521
68 slr1506 Hypothetical protein 89.20 0.6132
69 slr1463 Elongation factor EF-G 93.45 0.6285
70 sll0680 Phosphate-binding periplasmic protein precursor (PBP) 95.94 0.5080
71 sll1817 30S ribosomal protein S11 96.66 0.6204
72 slr0496 Unknown protein 99.34 0.6056
73 slr0012 Ribulose bisphosphate carboxylase small subunit 100.04 0.6037
74 sll1814 Preprotein translocase SecY subunit 100.12 0.6320
75 slr1356 30S ribosomal protein S1 102.88 0.6234
76 ssr3409 Hypothetical protein 104.79 0.5829
77 sll1743 50S ribosomal protein L11 105.25 0.6306
78 sll0529 Hypothetical protein 112.58 0.6195
79 ssr1789 CAB/ELIP/HLIP-related protein HliD 116.31 0.5670
80 sll1525 Phosphoribulokinase 118.58 0.5584
81 slr0213 GMP synthetase 118.71 0.5940
82 slr0575 Hypothetical protein 121.42 0.5735
83 sll1800 50S ribosomal protein L4 122.22 0.5485
84 sll1802 50S ribosomal protein L2 123.02 0.5531
85 slr0752 Enolase 123.17 0.5709
86 slr1234 Protein kinase C inhibitor 125.74 0.5638
87 sll0900 ATP phosphoribosyltransferase 129.34 0.6065
88 sll0767 50S ribosomal protein L20 133.82 0.6035
89 sll0735 Hypothetical protein 137.67 0.5870
90 sll1804 30S ribosomal protein S3 139.71 0.5746
91 sll1818 RNA polymerase alpha subunit 140.07 0.5567
92 slr1920 Unknown protein 140.57 0.5365
93 ssr2781 Hypothetical protein 141.46 0.5122
94 sll1775 Hypothetical protein 146.41 0.5548
95 slr1279 NADH dehydrogenase subunit 3 147.95 0.5959
96 sll1097 30S ribosomal protein S7 150.97 0.5600
97 slr2034 Putative homolog of plant HCF136, which is essential for stability or assembly of photosystem II 157.55 0.5382
98 sll2005 DNA gyrase B subunit [Contains: Ssp gyrB intein] 158.08 0.5463
99 sll1824 50S ribosomal protein L25 158.48 0.5564
100 slr2006 Hypothetical protein 161.74 0.5045
101 slr1789 Unknown protein 163.16 0.4760
102 slr1097 Hypothetical protein 163.61 0.5147
103 slr1311 Photosystem II D1 protein 164.11 0.4844
104 sll1767 30S ribosomal protein S6 164.21 0.5196
105 slr1330 ATP synthase epsilon chain of CF(1) 164.22 0.5413
106 slr0006 Unknown protein 164.50 0.5019
107 slr1329 ATP synthase beta subunit 164.54 0.5502
108 sml0011 Hypothetical protein 164.98 0.4933
109 sll1316 Cytochrome b6-f complex iron-sulfur subunit (Rieske iron sulfur protein) 165.08 0.4324
110 sll0822 Hypothetical protein 166.20 0.5453
111 sll1299 Acetate kinase 168.48 0.4689
112 sll1213 GDP-fucose synthetase 170.21 0.5627
113 ssr1399 30S ribosomal protein S18 170.21 0.5147
114 ssr3410 Hypothetical protein 170.29 0.5114
115 sll1747 Chorismate synthase 170.55 0.5499
116 sll0017 Glutamate-1-semialdehyde aminomutase 173.32 0.5537
117 slr1720 Aspartyl-tRNA synthetase 173.41 0.5663
118 slr0773 Hypothetical protein 176.79 0.4914
119 sll1789 RNA polymerase beta prime subunit 177.18 0.5154
120 sll1820 TRNA pseudouridine synthase 1 177.19 0.5357
121 slr0804 Probable D-alanyl-D-alanine carboxypeptidase 178.30 0.5148
122 ssr2799 50S ribosomal protein L27 179.72 0.5437
123 ssr1528 Hypothetical protein 180.57 0.4923
124 sll1530 Unknown protein 184.62 0.5128
125 slr0710 Glutamate dehydrogenase (NADP+) 184.98 0.4561
126 slr2024 Two-component response regulator CheY subfamily 193.39 0.4861
127 slr1719 DrgA protein homolog 193.48 0.5387
128 ssl0020 Ferredoxin I, essential for growth 193.71 0.4733
129 sll1415 Hypothetical protein 194.81 0.4113
130 sll0427 Photosystem II manganese-stabilizing polypeptide 194.88 0.4601
131 sll1745 50S ribosomal protein L10 196.88 0.4767
132 sll1786 Putative deoxyribonuclease, tatD homolog 197.28 0.5026
133 sll1787 RNA polymerase beta subunit 197.48 0.4972
134 slr0985 DTDP-4-dehydrorhamnose 3,5-epimerase 197.73 0.5142
135 sll1799 50S ribosomal protein L3 200.33 0.4731
136 slr0772 Light-independent protochlorophyllide reductase subunit ChlB 200.55 0.4216
137 sll1801 50S ribosomal protein L23 205.27 0.4581
138 ssr1552 Hypothetical protein 206.75 0.4738
139 sll1746 50S ribosomal protein L12 207.08 0.4816
140 sll1816 30S ribosomal protein S13 210.24 0.4929
141 sll1143 ATP-dependent helicase PcrA 212.01 0.4739
142 sll0839 Hypothetical protein 220.47 0.4498
143 sll0404 Glycolate oxidase subunit GlcD 220.79 0.4777
144 slr1276 Hypothetical protein 220.91 0.4729
145 slr1247 Phosphate-binding periplasmic protein precursor (PBP) 222.47 0.3622
146 slr1176 Glucose-1-phosphate adenylyltransferase 222.68 0.4744
147 sll1910 Protein conferring resistance to acetazolamide Zam 223.00 0.4676
148 sll1663 Phycocyanin alpha phycocyanobilin lyase related protein 223.37 0.4962
149 sll1471 Phycobilisome rod-core linker polypeptide 226.36 0.4353
150 slr1250 Phosphate transport ATP-binding protein PstB homolog 229.54 0.3564
151 sll0030 Cmp operon transcriptional regulator, LysR family protein 229.57 0.5163
152 sll0933 Hypothetical protein 230.95 0.4951
153 sll1819 50S ribosomal protein L17 234.39 0.4904
154 sll0555 Methionine aminopeptidase 234.83 0.4594
155 sll1721 Pyruvate dehydrogenase E1 component, beta subunit 234.97 0.4871
156 slr1887 Porphobilinogen deaminase (hydroxymethylbilane synthase, preuroporphyrinogen synthase) 235.66 0.4808
157 sll0445 Unknown protein 237.24 0.4334
158 sll0576 Putative sugar-nucleotide epimerase/dehydratease 237.62 0.4623
159 sll1933 DnaJ protein, heat shock protein 40, molecular chaperone 237.64 0.4776
160 slr1331 Periplasmic processing protease 238.66 0.4939
161 slr1678 50S ribosomal protein L21 239.04 0.4616
162 slr0625 Hypothetical protein 239.25 0.4889
163 sll0227 Peptidyl-prolyl cis-trans isomerase B, periplasmic protein 239.74 0.5043
164 ssl1426 50S ribosomal protein L35 240.73 0.5068
165 ssl2653 Unknown protein 241.94 0.4267
166 ssl2233 30S ribosomal protein S20 243.23 0.4653
167 slr1425 Hypothetical protein 246.38 0.4641
168 slr0116 Phycocyanobilin:ferredoxin oxidoreductase 249.94 0.4506
169 sll1394 Peptide methionine sulfoxide reductase 250.25 0.4595
170 slr0925 Single-stranded DNA-binding protein 251.21 0.4888
171 slr0550 Dihydrodipicolinate synthase 251.87 0.4730
172 slr1174 Hypothetical protein 253.50 0.4559
173 sll1744 50S ribosomal protein L1 254.56 0.4808
174 slr1867 Anthranilate phosphoribosyltransferase 256.52 0.4846
175 slr0774 Protein-export membrane protein SecD 258.97 0.4808
176 slr0557 Valyl-tRNA synthetase 259.99 0.4926
177 ssr1558 Hypothetical protein 261.53 0.3944
178 slr0877 Glutamyl-tRNA(Gln) amidotransferase subunit A 263.51 0.4995
179 slr0922 Peptidyl-tRNA hydrolase 263.91 0.4455
180 ssr1604 50S ribosomal protein L28 264.52 0.4801
181 sll1742 Transcription antitermination protein NusG 264.73 0.4803
182 sll1822 30S ribosomal protein S9 265.76 0.4777
183 sll1536 Molybdopterin biosynthesis MoeB protein 266.07 0.4706
184 slr1166 UDP-glucose:tetrahydrobiopterin glucosyltransferase 266.24 0.4607
185 slr0915 Putative endonuclease [encoded in trnfM-intron: 2791054 - 2791708] 267.61 0.4534
186 slr0476 Unknown protein 268.50 0.4015
187 slr0657 Aspartate kinase 272.49 0.4690
188 slr2094 Fructose-1,6-/sedoheptulose-1,7-bisphosphatase 274.58 0.4594
189 sll1342 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase 276.35 0.4782
190 sll0661 Hypothetical protein YCF35 276.97 0.4292
191 slr1407 Unknown protein 277.57 0.4574
192 slr1646 Ribonuclease III 279.56 0.4688
193 slr1610 Putative C-3 methyl transferase 279.83 0.4577
194 slr0713 TRNA-guanine transglycosylase 284.22 0.4208
195 smr0011 50S ribosomal protein L34 284.43 0.4848
196 sll1821 50S ribosomal protein L13 286.88 0.4669
197 slr1248 Phosphate transport system permease protein PstC homolog 287.42 0.3275
198 sll0807 Pentose-5-phosphate-3-epimerase 290.35 0.4626
199 slr1780 Hypothetical protein YCF54 292.03 0.4367
200 ssl2009 Hypothetical protein 292.10 0.4330