Guide Gene

Gene ID
Mapoly0143s0037
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13445] RING-type zinc-finger; [PF10607] CTLH/CRA C-terminal to LisH motif domain; [PTHR12170:SF3] SPORULATION PROTEIN RMD5-RELATED (GLUCOSE-INDUCED DEGRADATION PROTEIN 2); [PTHR12170] MACROPHAGE ERYTHROBLAST ATTACHER-RELATED; [KOG2817] Predicted E3 ubiquitin ligase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0143s0037 [PF13445] RING-type zinc-finger; [PF10607] CTLH/CRA C-terminal to LisH motif domain; [PTHR12170:SF3] SPORULATION PROTEIN RMD5-RELATED (GLUCOSE-INDUCED DEGRADATION PROTEIN 2); [PTHR12170] MACROPHAGE ERYTHROBLAST ATTACHER-RELATED; [KOG2817] Predicted E3 ubiquitin ligase 0.00 1.0000
1 Mapoly0050s0128 [PTHR16222] ADP-RIBOSYLGLYCOHYDROLASE; [PF03747] ADP-ribosylglycohydrolase4.120.7707
2 Mapoly0101s0029 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding4.580.7201
3 Mapoly0103s0047 [KOG0427] Ubiquitin conjugating enzyme; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR24067:SF35] UBIQUITIN-CONJUGATING ENZYME E2 W; [K10688] ubiquitin-conjugating enzyme E2 W [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme10.000.7402
4 Mapoly0025s0102 [PF07264] Etoposide-induced protein 2.4 (EI24); [KOG3966] p53-mediated apoptosis protein EI24/PIG8; [K10134] etoposide-induced 2.4 mRNA; [PTHR21389] P53 INDUCED PROTEIN; [PTHR21389:SF0] SUBFAMILY NOT NAMED10.580.6924
5 Mapoly0006s0031 -13.420.6860
6 Mapoly0105s0044 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding14.350.7454
7 Mapoly0029s0115 [PTHR12482] UNCHARACTERIZED; [PF05057] Putative serine esterase (DUF676); [KOG4372] Predicted alpha/beta hydrolase14.830.7257
8 Mapoly0033s0144 [PTHR31354] FAMILY NOT NAMED14.900.7212
9 Mapoly0103s0077 [PTHR21297] DNA-DIRECTED RNA POLYMERASE II; [PTHR21297:SF1] DNA-DIRECTED RNA POLYMERASE II; [PF10186] UV radiation resistance protein and autophagy-related subunit 14; [GO:0010508] positive regulation of autophagy16.490.6879
10 Mapoly0029s0026 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0659] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7; [PTHR24056] CELL DIVISION PROTEIN KINASE18.440.6870
11 Mapoly0006s0136 [PTHR24007] BRCA1-ASSOCIATED PROTEIN; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [6.3.2.19] Ubiquitin--protein ligase.; [K10632] BRCA1-associated protein [EC:6.3.2.19]; [KOG0804] Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein); [PF02148] Zn-finger in ubiquitin-hydrolases and other protein; [PF07576] BRCA1-associated protein 219.210.7415
12 Mapoly0012s0121 [K11155] diacylglycerol O-acyltransferase 1 [EC:2.3.1.20 2.3.1.75 2.3.1.76]; [2.3.1.75] Long-chain-alcohol O-fatty-acyltransferase.; [KOG0380] Sterol O-acyltransferase/Diacylglycerol O-acyltransferase; [PF03062] MBOAT, membrane-bound O-acyltransferase family; [2.3.1.20] Diacylglycerol O-acyltransferase.; [2.3.1.76] Retinol O-fatty-acyltransferase.; [GO:0008374] O-acyltransferase activity; [PTHR10408] STEROL O-ACYLTRANSFERASE19.800.7165
13 Mapoly0027s0039 -22.910.6598
14 Mapoly0001s0494 [PF02991] Autophagy protein Atg8 ubiquitin like; [K08341] GABA(A) receptor-associated protein (autophagy-related protein 8); [PTHR10969] MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED; [KOG1654] Microtubule-associated anchor protein involved in autophagy and membrane trafficking23.240.7034
15 Mapoly0114s0005 [KOG1981] SOK1 kinase belonging to the STE20/SPS1/GC kinase family; [PF05794] T-complex protein 11; [PTHR12832] TESTIS-SPECIFIC PROTEIN PBS13 (T-COMPLEX 11 )24.290.6061
16 Mapoly0009s0085 [PTHR23284] PROLACTIN REGULATORY ELEMENT BINDING PROTEIN; [GO:0005515] protein binding; [PTHR23284:SF1] gb def: Hypothetical protein F4F15.300; [KOG0771] Prolactin regulatory element-binding protein/Protein transport protein SEC12p; [PF00400] WD domain, G-beta repeat33.500.5771
17 Mapoly0100s0042 [PF00564] PB1 domain; [GO:0005515] protein binding; [PF00569] Zinc finger, ZZ type; [GO:0008270] zinc ion binding; [PTHR20930:SF0] SUBFAMILY NOT NAMED; [PTHR20930] OVARIAN CARCINOMA ANTIGEN CA125-RELATED34.250.6751
18 Mapoly0031s0035 [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT41.580.6932
19 Mapoly0020s0063 [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity44.080.6380
20 Mapoly0065s0003 [PTHR22849] WDSAM1 PROTEIN; [GO:0016567] protein ubiquitination; [KOG0166] Karyopherin (importin) alpha; [GO:0004842] ubiquitin-protein ligase activity; [PF04564] U-box domain45.100.6088
21 Mapoly0043s0076 [GO:0003676] nucleic acid binding; [PF01844] HNH endonuclease; [GO:0004519] endonuclease activity45.350.6045
22 Mapoly0108s0065 [KOG1432] Predicted DNA repair exonuclease SIA1; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [PTHR32440:SF0] SUBFAMILY NOT NAMED; [PTHR32440] FAMILY NOT NAMED46.480.7150
23 Mapoly0037s0060 [PF00097] Zinc finger, C3HC4 type (RING finger); [PF04366] Family of unknown function (DUF500); [KOG1843] Uncharacterized conserved protein; [GO:0046872] metal ion binding; [PF01363] FYVE zinc finger; [PTHR15629] SH3YL1 PROTEIN48.240.5811
24 Mapoly0015s0144 -54.770.6905
25 Mapoly0075s0079 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter55.320.6942
26 Mapoly0118s0039 [PF00571] CBS domain; [PTHR13780] AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT; [GO:0030554] adenyl nucleotide binding56.990.6648
27 Mapoly0071s0064 [PTHR11922] GMP SYNTHASE-RELATED; [PF00117] Glutamine amidotransferase class-I; [KOG3179] Predicted glutamine synthetase58.340.6518
28 Mapoly0002s0227 [PTHR24067:SF54] UBIQUITIN-CONJUGATING ENZYME E2 J1; [KOG0428] Non-canonical ubiquitin conjugating enzyme 1; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [K10578] ubiquitin-conjugating enzyme E2 J1 [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme61.400.5925
29 Mapoly0073s0018 [PTHR23309] 3-HYDROXYACYL-COA DEHYROGENASE; [GO:0055114] oxidation-reduction process; [PF00378] Enoyl-CoA hydratase/isomerase family; [K10527] enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211]; [GO:0006631] fatty acid metabolic process; [1.1.1.35] 3-hydroxyacyl-CoA dehydrogenase.; [KOG1683] Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00725] 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; [GO:0003824] catalytic activity; [PF02737] 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; [GO:0003857] 3-hydroxyacyl-CoA dehydrogenase activity; [1.1.1.211] Long-chain-3-hydroxyacyl-CoA dehydrogenase.; [4.2.1.17] Enoyl-CoA hydratase.62.030.6486
30 Mapoly0047s0020 [PF03226] Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG3399] Predicted Yippee-type zinc-binding protein63.120.6505
31 Mapoly0179s0006 -63.770.6570
32 Mapoly0185s0006 [PTHR13414] HUEL-CATION TRANSPORTER; [PF01545] Cation efflux family; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity64.600.5377
33 Mapoly0068s0099 [PTHR20854] INOSITOL MONOPHOSPHATASE; [GO:0046854] phosphatidylinositol phosphorylation; [3.1.3.7] 3'(2'),5'-bisphosphate nucleotidase.; [KOG1528] Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1; [PF00459] Inositol monophosphatase family; [K01082] 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]67.810.5170
34 Mapoly0008s0157 [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [K03875] F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2); [PF00646] F-box domain68.410.6728
35 Mapoly0023s0095 -68.780.6307
36 Mapoly0032s0047 [PTHR11614] PHOSPHOLIPASE-RELATED; [KOG1455] Lysophospholipase; [PF12695] Alpha/beta hydrolase family68.930.6383
37 Mapoly0011s0186 -71.870.6402
38 Mapoly0047s0046 [KOG2740] Clathrin-associated protein medium chain; [GO:0016192] vesicle-mediated transport; [K12398] AP-3 complex subunit mu; [GO:0005515] protein binding; [PTHR11998] CLATHRIN COAT ASSEMBLY PROTEIN; [PF00928] Adaptor complexes medium subunit family; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR11998:SF4] CLATHRIN COAT ADAPTOR AP3 MEDIUM CHAIN72.360.6997
39 Mapoly0102s0055 [PTHR19878] AUTOPHAGY PROTEIN 16-LIKE; [GO:0005515] protein binding; [PTHR19878:SF0] SUBFAMILY NOT NAMED; [PF08614] Autophagy protein 16 (ATG16); [PF00400] WD domain, G-beta repeat; [KOG0288] WD40 repeat protein TipD77.330.5626
40 Mapoly0130s0019 [GO:0005737] cytoplasm; [PF02544] 3-oxo-5-alpha-steroid 4-dehydrogenase; [GO:0016021] integral to membrane; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [PTHR14624] DFG10 PROTEIN; [KOG1640] Predicted steroid reductase; [GO:0006629] lipid metabolic process77.630.6772
41 Mapoly0083s0036 [PF15054] Domain of unknown function (DUF4535)79.500.6806
42 Mapoly0175s0008 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG3085] Predicted hydrolase (HAD superfamily); [PF13242] HAD-hyrolase-like81.670.6072
43 Mapoly0155s0028 [PTHR10052] 60S RIBOSOMAL PROTEIN L18A83.070.5080
44 Mapoly0069s0040 [GO:0016758] transferase activity, transferring hexosyl groups; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase83.160.6273
45 Mapoly0070s0042 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain83.380.6766
46 Mapoly0010s0127 -86.750.6136
47 Mapoly0020s0013 [PTHR25040] FAMILY NOT NAMED; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding87.870.6662
48 Mapoly0071s0092 [KOG4595] Uncharacterized conserved protein; [PF09811] Essential protein Yae1, N terminal88.430.6304
49 Mapoly0058s0055 [PF06244] Protein of unknown function (DUF1014); [PTHR21680:SF0] SUBFAMILY NOT NAMED; [KOG3223] Uncharacterized conserved protein; [PTHR21680] UNCHARACTERIZED89.140.6625
50 Mapoly0007s0047 [PF07228] Stage II sporulation protein E (SpoIIE); [KOG1379] Serine/threonine protein phosphatase; [GO:0003824] catalytic activity; [PTHR12320] PROTEIN PHOSPHATASE 2C92.470.6622
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