Guide Gene

Gene ID
Mapoly0143s0030
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [6.3.2.19] Ubiquitin--protein ligase.; [K10143] E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19]; [PF13923] Zinc finger, C3HC4 type (RING finger); [PF00400] WD domain, G-beta repeat

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0143s0030 [KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [6.3.2.19] Ubiquitin--protein ligase.; [K10143] E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19]; [PF13923] Zinc finger, C3HC4 type (RING finger); [PF00400] WD domain, G-beta repeat 0.00 1.0000
1 Mapoly0094s0025 [GO:0004871] signal transducer activity; [PF13188] PAS domain; [GO:0007165] signal transduction2.450.6876
2 Mapoly0019s0065 [GO:0008652] cellular amino acid biosynthetic process; [GO:0055114] oxidation-reduction process; [GO:0009082] branched-chain amino acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF07991] Acetohydroxy acid isomeroreductase, catalytic domain; [1.1.1.86] Ketol-acid reductoisomerase.; [GO:0004455] ketol-acid reductoisomerase activity; [PTHR21371] FAMILY NOT NAMED; [K00053] ketol-acid reductoisomerase [EC:1.1.1.86]; [PTHR21371:SF1] SUBFAMILY NOT NAMED; [PF01450] Acetohydroxy acid isomeroreductase, catalytic domain8.890.7235
3 Mapoly0014s0147 [PTHR10072] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN19.490.7109
4 Mapoly0065s0015 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF02272] DHHA1 domain; [PTHR11777] ALANYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [PF01411] tRNA synthetases class II (A); [KOG0188] Alanyl-tRNA synthetase; [GO:0003676] nucleic acid binding; [K01872] alanyl-tRNA synthetase [EC:6.1.1.7]; [GO:0006419] alanyl-tRNA aminoacylation; [6.1.1.7] Alanine--tRNA ligase.; [GO:0004813] alanine-tRNA ligase activity19.970.7046
5 Mapoly0032s0102 [GO:0008760] UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [GO:0019277] UDP-N-acetylgalactosamine biosynthetic process; [PTHR21090] AROM/DEHYDROQUINATE SYNTHASE; [PF00275] EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); [PTHR21090:SF4] UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE20.740.6674
6 Mapoly0060s0074 -27.500.6912
7 Mapoly0088s0059 [PF07714] Protein tyrosine kinase; [KOG0192] Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs; [PTHR23257] SERINE-THREONINE PROTEIN KINASE; [GO:0004672] protein kinase activity; [GO:0004871] signal transducer activity; [PF13426] PAS domain; [GO:0007165] signal transduction; [GO:0006468] protein phosphorylation31.190.6864
8 Mapoly0015s0143 [PF12204] Domain of unknown function (DUF3598)32.170.6880
9 Mapoly0101s0029 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding34.960.6213
10 Mapoly0068s0059 [GO:0016020] membrane; [PTHR22911] ACYL-MALONYL CONDENSING ENZYME-RELATED; [PF00892] EamA-like transporter family38.670.6551
11 Mapoly0003s0132 -40.620.6465
12 Mapoly0097s0089 [K09015] Fe-S cluster assembly protein SufD; [PF01458] Uncharacterized protein family (UPF0051); [PTHR30508] FES CLUSTER ASSEMBLY PROTEIN SUF; [GO:0016226] iron-sulfur cluster assembly42.210.6756
13 Mapoly0060s0090 [GO:0016020] membrane; [GO:0008519] ammonium transmembrane transporter activity; [GO:0015696] ammonium transport; [GO:0072488] ammonium transmembrane transport; [PTHR11730] AMMONIUM TRANSPORTER; [PF00909] Ammonium Transporter Family; [KOG0682] Ammonia permease; [PTHR11730:SF6] AMMONIUM TRANSPORTER48.840.5983
14 Mapoly0039s0059 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR12565] STEROL REGULATORY ELEMENT-BINDING PROTEIN50.740.6221
15 Mapoly0030s0090 [K00434] L-ascorbate peroxidase [EC:1.11.1.11]; [GO:0055114] oxidation-reduction process; [PF00141] Peroxidase; [GO:0020037] heme binding; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity; [PTHR31356] FAMILY NOT NAMED; [1.11.1.11] L-ascorbate peroxidase.56.180.6554
16 Mapoly0002s0332 [KOG2367] Alpha-isopropylmalate synthase/homocitrate synthase; [PF00682] HMGL-like; [2.3.3.13] 2-isopropylmalate synthase.; [GO:0003852] 2-isopropylmalate synthase activity; [K01649] 2-isopropylmalate synthase [EC:2.3.3.13]; [GO:0009098] leucine biosynthetic process; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [PTHR10277:SF9] 2-ISOPROPYLMALATE SYNTHASE; [PF08502] LeuA allosteric (dimerisation) domain; [GO:0003824] catalytic activity56.570.6763
17 Mapoly0169s0024 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis59.670.6014
18 Mapoly0045s0149 [PTHR22960:SF0] SUBFAMILY NOT NAMED; [KOG2876] Molybdenum cofactor biosynthesis pathway protein; [PF13353] 4Fe-4S single cluster domain; [GO:0006777] Mo-molybdopterin cofactor biosynthetic process; [PF04055] Radical SAM superfamily; [GO:0051539] 4 iron, 4 sulfur cluster binding; [PTHR22960] MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [GO:0019008] molybdopterin synthase complex; [PF06463] Molybdenum Cofactor Synthesis C; [K03639] molybdenum cofactor biosynthesis protein64.810.6546
19 Mapoly0141s0032 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED71.300.6375
20 Mapoly0091s0003 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [GO:0030071] regulation of mitotic metaphase/anaphase transition; [KOG1155] Anaphase-promoting complex (APC), Cdc23 subunit; [PF13181] Tetratricopeptide repeat; [PF04049] Anaphase promoting complex subunit 8 / Cdc23; [GO:0005680] anaphase-promoting complex; [PF00515] Tetratricopeptide repeat; [K03355] anaphase-promoting complex subunit 8; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF10] CELL DIVISION CYCLE 2371.670.6425
21 Mapoly0087s0041 [GO:0016020] membrane; [GO:0005524] ATP binding; [PF08370] Plant PDR ABC transporter associated; [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF14510] ABC-transporter extracellular N-terminal; [KOG0065] Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily; [PF00005] ABC transporter82.180.6293
22 Mapoly0083s0005 [PF05773] RWD domain; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00035] Double-stranded RNA binding motif; [GO:0005515] protein binding; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold83.180.6562
23 Mapoly0118s0002 [PF13855] Leucine rich repeat; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein83.790.5301
24 Mapoly0058s0055 [PF06244] Protein of unknown function (DUF1014); [PTHR21680:SF0] SUBFAMILY NOT NAMED; [KOG3223] Uncharacterized conserved protein; [PTHR21680] UNCHARACTERIZED87.060.6334
25 Mapoly0087s0003 [PTHR31373] FAMILY NOT NAMED; [PF11443] Domain of unknown function (DUF2828)91.150.6143
26 Mapoly0028s0010 [GO:0030599] pectinesterase activity; [PF01095] Pectinesterase; [GO:0042545] cell wall modification; [K01051] pectinesterase [EC:3.1.1.11]; [PTHR31321] FAMILY NOT NAMED; [3.1.1.11] Pectinesterase.; [GO:0005618] cell wall97.710.6177
27 Mapoly0187s0013 [K08488] syntaxin 7; [PTHR19957:SF38] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR19957] SYNTAXIN; [PF14523] Syntaxin-like protein; [KOG0811] SNARE protein PEP12/VAM3/Syntaxin 7/Syntaxin 17; [PF05739] SNARE domain101.560.6348
28 Mapoly0060s0017 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase102.130.5334
29 Mapoly0014s0098 -102.730.5860
30 Mapoly0085s0081 [K12127] pseudo-response regulator 1; [PF00072] Response regulator receiver domain; [PF06203] CCT motif; [GO:0000160] phosphorelay signal transduction system; [GO:0005515] protein binding; [PTHR26402] RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM106.060.6043
31 Mapoly0014s0026 [PTHR31485] FAMILY NOT NAMED106.240.6123
32 Mapoly0009s0207 [PTHR10357] ALPHA-AMYLASE; [K00700] 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [2.4.1.18] 1,4-alpha-glucan branching enzyme.; [GO:0005975] carbohydrate metabolic process; [PF02806] Alpha amylase, C-terminal all-beta domain; [GO:0003824] catalytic activity; [KOG0470] 1,4-alpha-glucan branching enzyme/starch branching enzyme II; [GO:0043169] cation binding; [PF02922] Carbohydrate-binding module 48 (Isoamylase N-terminal domain); [PF00128] Alpha amylase, catalytic domain107.440.5380
33 Mapoly0009s0209 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family107.570.6337
34 Mapoly0002s0337 [GO:0016020] membrane; [GO:0005524] ATP binding; [PF08370] Plant PDR ABC transporter associated; [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF14510] ABC-transporter extracellular N-terminal; [KOG0065] Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily; [PF00005] ABC transporter107.830.5929
35 Mapoly0061s0076 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family109.050.5962
36 Mapoly0027s0002 [PTHR12175] AD039 (HT014) (THIOREDOXIN FAMILY TRP26); [KOG1730] Thioredoxin-like protein; [PF06201] PITH domain109.090.5525
37 Mapoly0082s0009 [PF10184] Uncharacterized conserved protein (DUF2358); [PTHR22750] G-PROTEIN COUPLED RECEPTOR; [KOG4457] Uncharacterized conserved protein110.300.5733
38 Mapoly0015s0173 [PF02361] Cobalt transport protein110.500.6132
39 Mapoly0073s0087 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE111.590.5984
40 Mapoly0081s0061 [KOG0454] 3-isopropylmalate dehydratase (aconitase superfamily); [4.2.1.35] (R)-2-methylmalate dehydratase.; [4.2.1.33] 3-isopropylmalate dehydratase.; [K01703] 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]; [GO:0008152] metabolic process; [PTHR11670] ACONITASE; [PF00330] Aconitase family (aconitate hydratase)113.370.6300
41 Mapoly0066s0051 [PTHR15913:SF0] SUBFAMILY NOT NAMED; [PTHR15913] ACID CLUSTER PROTEIN 33; [PF12697] Alpha/beta hydrolase family115.130.5899
42 Mapoly0033s0146 [PTHR31081] FAMILY NOT NAMED; [PF07168] Ureide permease115.450.5949
43 Mapoly0015s0087 [PF14310] Fibronectin type III-like domain; [PF00933] Glycosyl hydrolase family 3 N terminal domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [3.2.1.21] Beta-glucosidase.; [GO:0005975] carbohydrate metabolic process; [K05349] beta-glucosidase [EC:3.2.1.21]; [PTHR30620] PERIPLASMIC BETA-GLUCOSIDASE-RELATED; [PF01915] Glycosyl hydrolase family 3 C-terminal domain115.780.6113
44 Mapoly0059s0058 [PF01541] GIY-YIG catalytic domain; [PTHR20208] FAMILY NOT NAMED116.960.5750
45 Mapoly0117s0045 [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED117.020.5701
46 Mapoly0180s0022 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED118.820.5734
47 Mapoly0007s0246 [PTHR14911] FAMILY NOT NAMED; [PF01170] Putative RNA methylase family UPF0020122.680.5948
48 Mapoly0079s0003 [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [PTHR11863:SF3] SUR2 HYDROXYLASE/DESATURASE; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [PTHR11863] STEROL DESATURASE; [KOG0874] Sphingolipid hydroxylase124.710.6085
49 Mapoly0046s0011 [3.4.11.9] Xaa-Pro aminopeptidase.; [GO:0016787] hydrolase activity; [K01262] Xaa-Pro aminopeptidase [EC:3.4.11.9]; [PF00557] Metallopeptidase family M24; [KOG2413] Xaa-Pro aminopeptidase; [PF01321] Creatinase/Prolidase N-terminal domain; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)126.550.5891
50 Mapoly0085s0075 [PTHR31317] FAMILY NOT NAMED; [PF06219] Protein of unknown function (DUF1005)130.460.6290
Showing 1 to 50 of 200 records
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