Guide Gene

Gene ID
Mapoly0098s0031
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006355] regulation of transcription, DNA-dependent; [KOG4086] Transcriptional regulator SOH1; [PF05669] SOH1; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [PTHR13186:SF0] SUBFAMILY NOT NAMED; [PTHR13186] MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT (SOH1)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0098s0031 [GO:0006355] regulation of transcription, DNA-dependent; [KOG4086] Transcriptional regulator SOH1; [PF05669] SOH1; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [PTHR13186:SF0] SUBFAMILY NOT NAMED; [PTHR13186] MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT (SOH1) 0.00 1.0000
1 Mapoly0015s0174 [KOG4559] Uncharacterized conserved protein; [PF10046] Biogenesis of lysosome-related organelles complex-1 subunit 23.160.7736
2 Mapoly0004s0020 [PTHR13180] SMALL MEMBRANE PROTEIN-RELATED; [KOG3393] Predicted membrane protein; [PF05255] Uncharacterised protein family (UPF0220)5.660.7723
3 Mapoly0111s0030 -9.590.7186
4 Mapoly0179s0007 [PF14283] Domain of unknown function (DUF4366)10.100.7234
5 Mapoly0006s0194 [PF03145] Seven in absentia protein family; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005634] nucleus; [PTHR10315] SEVEN IN ABSENTIA HOMOLOG; [GO:0007275] multicellular organismal development; [KOG3002] Zn finger protein11.310.7007
6 Mapoly0089s0036 -11.310.6117
7 Mapoly0151s0012 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR12874] FAMILY NOT NAMED; [K10295] F-box protein 9; [KOG2997] F-box protein FBX9; [PTHR12874:SF9] SUBFAMILY NOT NAMED11.620.7122
8 Mapoly0050s0025 [GO:0047746] chlorophyllase activity; [3.1.1.14] Chlorophyllase.; [K08099] chlorophyllase [EC:3.1.1.14]; [PF07224] Chlorophyllase; [GO:0015996] chlorophyll catabolic process12.960.7100
9 Mapoly0075s0062 [PTHR31435] FAMILY NOT NAMED; [PF14542] GCN5-related N-acetyl-transferase13.420.7113
10 Mapoly0153s0025 -13.860.6245
11 Mapoly0075s0026 [KOG3319] Predicted membrane protein; [GO:0016021] integral to membrane; [PF04061] ORMDL family; [PTHR12665] ORMDL PROTEINS14.070.6911
12 Mapoly0022s0103 [KOG4054] Uncharacterized conserved protein; [PTHR20955] UNCHARACTERIZED; [GO:0005789] endoplasmic reticulum membrane; [PF07086] Protein of unknown function (DUF1352); [GO:0007029] endoplasmic reticulum organization14.490.6960
13 Mapoly0084s0063 -14.660.6329
14 Mapoly0107s0018 [GO:0015035] protein disulfide oxidoreductase activity; [PTHR13887] GLUTATHIONE S-TRANSFERASE KAPPA; [PF01323] DSBA-like thioredoxin domain14.700.6962
15 Mapoly0011s0084 [PTHR13292] UNCHARACTERIZED; [KOG4493] Uncharacterized conserved protein; [PF07855] Protein of unknown function (DUF1649); [PTHR13292:SF0] SUBFAMILY NOT NAMED15.870.6854
16 Mapoly0080s0082 -16.160.5886
17 Mapoly0156s0023 [PF07103] Protein of unknown function (DUF1365)16.490.6796
18 Mapoly0023s0018 -20.980.6666
19 Mapoly0061s0007 [PTHR24322] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase; [PTHR24322:SF31] 3-PHENYLPROPIONATE-DIHYDRODIOL/CINNAMIC ACID-DIHYDRODIOL DEHYDROGENASE; [KOG1205] Predicted dehydrogenase21.330.6419
20 Mapoly0004s0239 [PF07063] Domain of unknown function (DUF1338); [PTHR31136] FAMILY NOT NAMED21.910.6872
21 Mapoly0004s0140 [K12197] charged multivesicular body protein 1; [KOG3232] Vacuolar assembly/sorting protein DID2; [PF03357] Snf7; [PTHR10476] CHARGED MULTIVESICULAR BODY PROTEIN; [GO:0015031] protein transport; [PTHR10476:SF2] CHARGED MULTIVESICULAR BODY PROTEIN 1A23.870.6696
22 Mapoly0047s0020 [PF03226] Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG3399] Predicted Yippee-type zinc-binding protein24.450.6864
23 Mapoly0028s0097 [GO:0003677] DNA binding; [GO:0008270] zinc ion binding; [K03017] DNA-directed RNA polymerase II subunit RPB9; [PTHR11239:SF1] DNA-DIRECTED RNA POLYMERASE II; [KOG2691] RNA polymerase II subunit 9; [PF02150] RNA polymerases M/15 Kd subunit; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11239] DNA-DIRECTED RNA POLYMERASE; [PF01096] Transcription factor S-II (TFIIS)27.110.6645
24 Mapoly0013s0083 [GO:0030259] lipid glycosylation; [GO:0016758] transferase activity, transferring hexosyl groups; [PF04101] Glycosyltransferase family 28 C-terminal domain; [GO:0005975] carbohydrate metabolic process; [2.4.1.141] N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase.; [KOG3349] Predicted glycosyltransferase; [GO:0030246] carbohydrate binding; [PTHR12867] GLYCOSYL TRANSFERASE-RELATED; [K07432] beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]27.910.6363
25 Mapoly0035s0021 [PF12780] P-loop containing dynein motor region D4; [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12775] P-loop containing dynein motor region D3; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF12781] ATP-binding dynein motor region D5; [PF08393] Dynein heavy chain, N-terminal region 2; [GO:0003777] microtubule motor activity28.770.6624
26 Mapoly0050s0106 [GO:0005515] protein binding; [PF13414] TPR repeat; [PTHR15544] OSMOSIS RESPONSIVE FACTOR; [PTHR15544:SF0] SUBFAMILY NOT NAMED; [PF00515] Tetratricopeptide repeat29.730.6430
27 Mapoly0065s0040 [PF00378] Enoyl-CoA hydratase/isomerase family; [GO:0008152] metabolic process; [K12663] delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-]; [GO:0003824] catalytic activity; [KOG1681] Enoyl-CoA isomerase; [PTHR11941] ENOYL-COA HYDRATASE-RELATED; [5.3.3.-] Transposing C==C bonds.31.460.6638
28 Mapoly0044s0097 [GO:0055114] oxidation-reduction process; [GO:0030091] protein repair; [PTHR10173] METHIONINE SULFOXIDE REDUCTASE; [GO:0006979] response to oxidative stress; [GO:0016671] oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; [GO:0008113] peptide-methionine (S)-S-oxide reductase activity; [PF01625] Peptide methionine sulfoxide reductase; [KOG1635] Peptide methionine sulfoxide reductase32.190.6565
29 Mapoly0135s0031 [PTHR13078:SF5] SUBFAMILY NOT NAMED; [PTHR13078] FAMILY NOT NAMED; [PF01575] MaoC like domain; [PF13452] N-terminal half of MaoC dehydratase; [KOG1206] Peroxisomal multifunctional beta-oxidation protein and related enzymes32.620.6381
30 Mapoly0115s0053 [KOG0725] Reductases with broad range of substrate specificities; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [K13606] chlorophyll(ide) b reductase [EC:1.1.1.294]; [PF00106] short chain dehydrogenase; [1.1.1.294] Chlorophyll(ide) b reductase.; [PTHR24314] FAMILY NOT NAMED33.270.6568
31 Mapoly0068s0045 [GO:0016787] hydrolase activity; [PF07687] Peptidase dimerisation domain; [GO:0008152] metabolic process; [PF01546] Peptidase family M20/M25/M40; [PTHR32494] FAMILY NOT NAMED; [KOG2275] Aminoacylase ACY1 and related metalloexopeptidases34.290.5941
32 Mapoly0121s0046 -34.290.6618
33 Mapoly0073s0092 [PF13664] Domain of unknown function (DUF4149); [PTHR23241] LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATED; [KOG2886] Uncharacterized conserved protein35.500.6851
34 Mapoly0029s0143 -35.920.5901
35 Mapoly0122s0056 -35.990.6381
36 Mapoly0083s0035 [KOG3339] Predicted glycosyltransferase; [K07441] beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]; [PTHR12154:SF2] gb def: N terminus subunit of GlcA transferase; [PF08660] Oligosaccharide biosynthesis protein Alg14 like; [2.4.1.141] N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase.; [PTHR12154] GLYCOSYL TRANSFERASE-RELATED36.410.6778
37 Mapoly0036s0156 [PTHR15857] COMM DOMAIN CONTAINING PROTEIN 2; [PF07258] HCaRG protein38.970.6221
38 Mapoly0034s0036 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22766:SF29] SUBFAMILY NOT NAMED39.800.6737
39 Mapoly0004s0131 [PTHR14986:SF4] gb def: agcp5965 [anopheles gambiae str. pest]; [GO:0005737] cytoplasm; [PTHR14986] RURM1 PROTEIN; [GO:0034227] tRNA thio-modification; [K12161] ubiquitin related modifier 1; [KOG4146] Ubiquitin-like protein; [PF09138] Urm1 (Ubiquitin related modifier)39.870.6510
40 Mapoly0020s0092 [PF04133] Vacuolar protein sorting 55; [PTHR12050:SF0] SUBFAMILY NOT NAMED; [KOG2174] Leptin receptor gene-related protein; [PTHR12050] LEPTIN RECEPTOR-RELATED40.530.6476
41 Mapoly0009s0167 [PF12483] E3 Ubiquitin ligase; [KOG1571] Predicted E3 ubiquitin ligase; [GO:0004842] ubiquitin-protein ligase activity; [GO:0007005] mitochondrion organization; [PF13920] Zinc finger, C3HC4 type (RING finger); [PTHR12183] UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN43.270.6415
42 Mapoly0170s0018 [K09591] probable steroid reductase DET2 [EC:1.3.99.-]; [GO:0005737] cytoplasm; [PF02544] 3-oxo-5-alpha-steroid 4-dehydrogenase; [GO:0016021] integral to membrane; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [KOG1638] Steroid reductase; [1.3.99.-] With other acceptors.; [PTHR10556] 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE; [GO:0006629] lipid metabolic process46.040.6199
43 Mapoly0009s0146 -46.990.6454
44 Mapoly0091s0007 [GO:0046912] transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer; [K01647] citrate synthase [EC:2.3.3.1]; [PTHR11739] CITRATE SYNTHASE; [PTHR11739:SF1] CITRATE SYNTHASE-RELATED; [GO:0044262] cellular carbohydrate metabolic process; [2.3.3.1] Citrate (Si)-synthase.; [PF00285] Citrate synthase; [KOG2617] Citrate synthase47.180.6351
45 Mapoly0002s0260 [PTHR12277] UNCHARACTERIZED; [K06889] hemoglobin; [PF12695] Alpha/beta hydrolase family; [KOG4391] Predicted alpha/beta hydrolase BEM4647.560.6164
46 Mapoly0069s0014 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin48.930.6120
47 Mapoly0034s0060 [4.4.1.14] 1-aminocyclopropane-1-carboxylate synthase.; [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [KOG0256] 1-aminocyclopropane-1-carboxylate synthase, and related proteins; [K01762] 1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14]; [PF00155] Aminotransferase class I and II; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED50.410.6017
48 Mapoly0075s0049 -53.670.6282
49 Mapoly0045s0016 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family54.680.6115
50 Mapoly0027s0076 -55.680.6121
Showing 1 to 50 of 200 records
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