Guide Gene

Gene ID
Mapoly0098s0008
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR11626] FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE; [GO:0009058] biosynthetic process; [KOG1459] Squalene synthetase; [2.5.1.21] Squalene synthase.; [GO:0016740] transferase activity; [K00801] farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]; [PF00494] Squalene/phytoene synthase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0098s0008 [PTHR11626] FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE; [GO:0009058] biosynthetic process; [KOG1459] Squalene synthetase; [2.5.1.21] Squalene synthase.; [GO:0016740] transferase activity; [K00801] farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]; [PF00494] Squalene/phytoene synthase 0.00 1.0000
1 Mapoly0008s0012 -8.000.6879
2 Mapoly0062s0096 [K07019] putative glutamine amidotransferase; [PTHR10794] ABHYDROLASE DOMAIN-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family; [KOG1838] Alpha/beta hydrolase16.700.7161
3 Mapoly0164s0015 [GO:0015035] protein disulfide oxidoreductase activity; [KOG0910] Thioredoxin-like protein; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [PTHR10438] THIOREDOXIN33.200.6951
4 Mapoly0042s0078 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding38.160.6880
5 Mapoly0142s0007 [PTHR24193] ANKYRIN REPEAT PROTEIN; [PF13857] Ankyrin repeats (many copies); [KOG4214] Myotrophin and similar proteins38.520.6931
6 Mapoly0090s0016 -40.840.6934
7 Mapoly0044s0006 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily48.100.5861
8 Mapoly0091s0069 [PF14159] CAAD domains of cyanobacterial aminoacyl-tRNA synthetase55.180.6912
9 Mapoly0006s0049 [K02437] glycine cleavage system H protein; [PF01597] Glycine cleavage H-protein; [PTHR11715] GLYCINE CLEAVAGE SYSTEM H PROTEIN; [KOG3373] Glycine cleavage system H protein (lipoate-binding)57.390.6892
10 Mapoly0176s0011 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PF00875] DNA photolyase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family61.070.6509
11 Mapoly0050s0104 [PTHR32100] FAMILY NOT NAMED; [PF00487] Fatty acid desaturase; [KOG2987] Fatty acid desaturase; [GO:0006629] lipid metabolic process61.190.6483
12 Mapoly0033s0126 [PTHR22603] CHOLINE/ETHANOALAMINE KINASE; [PF01633] Choline/ethanolamine kinase; [KOG4720] Ethanolamine kinase65.120.6848
13 Mapoly0064s0007 [GO:0016758] transferase activity, transferring hexosyl groups; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase68.230.5694
14 Mapoly0114s0053 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]72.440.6862
15 Mapoly0100s0052 [GO:0016020] membrane; [GO:0006814] sodium ion transport; [GO:0055085] transmembrane transport; [PTHR10283] SOLUTE CARRIER FAMILY 13 MEMBER; [PF00939] Sodium:sulfate symporter transmembrane region; [GO:0005215] transporter activity78.400.6741
16 Mapoly0014s0171 [KOG1339] Aspartyl protease; [PF14543] Xylanase inhibitor N-terminal; [PTHR13683] ASPARTYL PROTEASES; [PF14541] Xylanase inhibitor C-terminal; [GO:0004190] aspartic-type endopeptidase activity; [GO:0006508] proteolysis79.200.6374
17 Mapoly0057s0083 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 280.140.6742
18 Mapoly0051s0097 [PTHR12126:SF1] NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT; [1.6.99.3] NADH dehydrogenase.; [PF13460] NADH(P)-binding; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [KOG2865] NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit; [K03953] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [EC:1.6.5.3 1.6.99.3]; [PTHR12126] NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED80.820.6602
19 Mapoly0032s0016 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PTHR24223] FAMILY NOT NAMED; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG0054] Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PF00005] ABC transporter81.310.6190
20 Mapoly0015s0074 [GO:0051537] 2 iron, 2 sulfur cluster binding; [1.10.99.1] Transferred entry: 1.10.9.1.; [GO:0016679] oxidoreductase activity, acting on diphenols and related substances as donors; [GO:0055114] oxidation-reduction process; [GO:0042651] thylakoid membrane; [KOG1671] Ubiquinol cytochrome c reductase, subunit RIP1; [K02636] cytochrome b6-f complex iron-sulfur subunit [EC:1.10.99.1]; [GO:0016491] oxidoreductase activity; [PTHR10134] CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL; [GO:0009496] plastoquinol--plastocyanin reductase activity; [PF00355] Rieske [2Fe-2S] domain; [PF08802] Cytochrome B6-F complex Fe-S subunit84.750.6835
21 Mapoly0125s0033 [GO:0016020] membrane; [K02698] photosystem I subunit X; [PF01241] Photosystem I psaG / psaK; [GO:0015979] photosynthesis; [GO:0009522] photosystem I89.470.6750
22 Mapoly0048s0103 [PTHR22893] NADH OXIDOREDUCTASE-RELATED; [PTHR22893:SF14] N-ETHYLMALEIMIDE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [GO:0010181] FMN binding; [PF00724] NADH:flavin oxidoreductase / NADH oxidase family; [KOG0134] NADH:flavin oxidoreductase/12-oxophytodienoate reductase93.640.6490
23 Mapoly0032s0111 [GO:0009523] photosystem II; [GO:0009507] chloroplast; [PF07123] Photosystem II reaction centre W protein (PsbW); [GO:0015979] photosynthesis94.470.6720
24 Mapoly0082s0023 [PTHR19370] NADH-CYTOCHROME B5 REDUCTASE; [K02639] ferredoxin; [GO:0009055] electron carrier activity; [PF00111] 2Fe-2S iron-sulfur cluster binding domain; [GO:0051536] iron-sulfur cluster binding99.890.6709
25 Mapoly0057s0082 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08912] light-harvesting complex II chlorophyll a/b binding protein 1; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting103.730.6669
26 Mapoly0014s0035 [PF00933] Glycosyl hydrolase family 3 N terminal domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR30620] PERIPLASMIC BETA-GLUCOSIDASE-RELATED; [PF01915] Glycosyl hydrolase family 3 C-terminal domain104.880.6463
27 Mapoly0054s0095 [PF00251] Glycosyl hydrolases family 32 N-terminal domain; [KOG0228] Beta-fructofuranosidase (invertase); [PTHR31953] FAMILY NOT NAMED; [PF08244] Glycosyl hydrolases family 32 C terminal105.700.6484
28 Mapoly0043s0110 [GO:0009512] cytochrome b6f complex; [PF08041] PetM family of cytochrome b6f complex subunit 7105.830.6711
29 Mapoly0023s0085 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [K07977] Arf/Sar family, other; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding106.980.6093
30 Mapoly0199s0014 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 2107.750.6708
31 Mapoly0091s0076 [PF14159] CAAD domains of cyanobacterial aminoacyl-tRNA synthetase109.020.6669
32 Mapoly0036s0106 -109.980.6085
33 Mapoly0029s0125 [PF01070] FMN-dependent dehydrogenase; [K11517] (S)-2-hydroxy-acid oxidase [EC:1.1.3.15]; [PTHR10578] (S)-2-HYDROXY-ACID OXIDASE-RELATED; [1.1.3.15] (S)-2-hydroxy-acid oxidase.; [GO:0016491] oxidoreductase activity; [KOG0538] Glycolate oxidase110.400.6608
34 Mapoly0075s0003 -111.780.6503
35 Mapoly0088s0069 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process112.290.6294
36 Mapoly0105s0011 [PTHR31425] FAMILY NOT NAMED; [PF06549] Protein of unknown function (DUF1118)116.150.6675
37 Mapoly0065s0080 -120.900.6545
38 Mapoly0127s0007 -122.740.6000
39 Mapoly0199s0019 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 2124.610.6596
40 Mapoly0052s0125 [PF00637] Region in Clathrin and VPS; [PTHR12616] VACUOLAR PROTEIN SORTING VPS41; [GO:0016192] vesicle-mediated transport; [KOG2066] Vacuolar assembly/sorting protein VPS41; [GO:0005515] protein binding; [GO:0006886] intracellular protein transport; [PF00400] WD domain, G-beta repeat124.900.5829
41 Mapoly0173s0008 [GO:0016020] membrane; [2.7.8.1] Ethanolaminephosphotransferase.; [GO:0008654] phospholipid biosynthetic process; [GO:0016780] phosphotransferase activity, for other substituted phosphate groups; [K00993] ethanolaminephosphotransferase [EC:2.7.8.1]; [PTHR10414] ETHANOLAMINEPHOSPHOTRANSFERASE; [KOG2877] sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases; [PF01066] CDP-alcohol phosphatidyltransferase126.690.6523
42 Mapoly0055s0098 [PTHR12363] TRANSPORTIN 3 AND IMPORTIN 13; [KOG2081] Nuclear transport regulator; [PF08389] Exportin 1-like protein126.950.6218
43 Mapoly0041s0012 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED130.450.6178
44 Mapoly0023s0086 [PF13839] GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p; [PTHR32285] FAMILY NOT NAMED; [PF14416] PMR5 N terminal Domain130.510.6105
45 Mapoly0002s0304 [PF14159] CAAD domains of cyanobacterial aminoacyl-tRNA synthetase131.430.6569
46 Mapoly0004s0125 [PTHR13906] PORCUPINE; [PF03062] MBOAT, membrane-bound O-acyltransferase family; [KOG2704] Predicted membrane protein; [PTHR13906:SF4] O-ACYLTRANSFERASE (MEMBRANE BOUND) DOMAIN CONTAINING PROTEIN135.170.6178
47 Mapoly0053s0046 [PF00484] Carbonic anhydrase; [KOG1578] Predicted carbonic anhydrase involved in protection against oxidative damage; [4.2.1.1] Carbonate dehydratase.; [GO:0008270] zinc ion binding; [GO:0004089] carbonate dehydratase activity; [K01673] carbonic anhydrase [EC:4.2.1.1]; [PTHR11002] FAMILY NOT NAMED136.950.6514
48 Mapoly0114s0056 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]137.480.6546
49 Mapoly0053s0102 [KOG0569] Permease of the major facilitator superfamily; [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED137.510.5890
50 Mapoly0058s0038 [PF13405] EF-hand domain; [GO:0005509] calcium ion binding137.860.6446
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