Guide Gene

Gene ID
Mapoly0097s0017
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006357] regulation of transcription from RNA polymerase II promoter; [PF08612] TATA-binding related factor (TRF) of subunit 20 of Mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [KOG4309] Transcription mediator-related factor; [PTHR12465:SF0] SUBFAMILY NOT NAMED; [PTHR12465] UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0097s0017 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PF08612] TATA-binding related factor (TRF) of subunit 20 of Mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [KOG4309] Transcription mediator-related factor; [PTHR12465:SF0] SUBFAMILY NOT NAMED; [PTHR12465] UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 0.00 1.0000
1 Mapoly0003s0233 -2.450.7738
2 Mapoly0112s0013 [PTHR11210] RING BOX; [KOG2930] SCF ubiquitin ligase, Rbx1 component; [PTHR11210:SF20] APC11 (ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 11), PROTEIN BINDING / ZINC ION BIN; [GO:0008270] zinc ion binding; [K03868] RING-box protein 1; [PF12678] RING-H2 zinc finger2.450.7567
3 Mapoly0002s0138 [GO:0016020] membrane; [K09647] mitochondrial inner membrane protease subunit 1 [EC:3.4.99.-]; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [PF10502] Signal peptidase, peptidase S26; [GO:0008236] serine-type peptidase activity; [KOG0171] Mitochondrial inner membrane protease, subunit IMP1; [3.4.99.-] Endopeptidases of unknown catalytic mechanism.; [PF00717] Peptidase S24-like; [GO:0006508] proteolysis3.610.7935
4 Mapoly0161s0019 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PF06179] Surfeit locus protein 5 subunit 22 of Mediator complex; [PTHR12434] FAMILY NOT NAMED; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [KOG3304] Surfeit family protein 54.000.6926
5 Mapoly0100s0046 -7.750.6828
6 Mapoly0036s0096 [K12181] COP9 signalosome complex subunit 8; [PTHR13339] COP9 SIGNALOSOME COMPLEX SUBUNIT 8; [PF10075] COP9 signalosome, subunit CSN8; [KOG4414] COP9 signalosome, subunit CSN88.000.6698
7 Mapoly0053s0064 [GO:0016020] membrane; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [GO:0008236] serine-type peptidase activity; [KOG1568] Mitochondrial inner membrane protease, subunit IMP2; [K09648] mitochondrial inner membrane protease subunit 2 [EC:3.4.99.-]; [3.4.99.-] Endopeptidases of unknown catalytic mechanism.; [PF00717] Peptidase S24-like; [GO:0006508] proteolysis17.320.6788
8 Mapoly0009s0017 -19.800.7203
9 Mapoly0011s0156 -21.170.6930
10 Mapoly0057s0028 [K09659] dolichyl-phosphate mannosyltransferase polypeptide 3; [PF08285] Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); [PTHR16433] FAMILY NOT NAMED; [PTHR16433:SF0] SUBFAMILY NOT NAMED; [KOG4841] Dolichol-phosphate mannosyltransferase, subunit 321.630.5974
11 Mapoly0075s0024 [PF06747] CHCH domain; [PTHR21107] FAMILY NOT NAMED; [KOG3477] Putative cytochrome c oxidase, subunit COX1922.980.6265
12 Mapoly0100s0050 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG4341] F-box protein containing LRR23.020.7015
13 Mapoly0094s0032 [PF08576] Eukaryotic protein of unknown function (DUF1764)23.370.7008
14 Mapoly0083s0035 [KOG3339] Predicted glycosyltransferase; [K07441] beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]; [PTHR12154:SF2] gb def: N terminus subunit of GlcA transferase; [PF08660] Oligosaccharide biosynthesis protein Alg14 like; [2.4.1.141] N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase.; [PTHR12154] GLYCOSYL TRANSFERASE-RELATED23.430.6886
15 Mapoly0004s0023 -23.960.5946
16 Mapoly0005s0063 [GO:0006406] mRNA export from nucleus; [GO:0000124] SAGA complex; [GO:0005643] nuclear pore; [GO:0045893] positive regulation of transcription, DNA-dependent; [PF10163] Transcription factor e(y)2; [KOG4479] Transcription factor e(y)2; [K11368] enhancer of yellow 2 transcription factor; [PTHR12514:SF1] ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR; [GO:0003713] transcription coactivator activity; [PTHR12514] ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR29.800.6542
17 Mapoly0094s0023 [PTHR13582] M-PHASE PHOSPHOPROTEIN 6; [PF10175] M-phase phosphoprotein 630.410.6539
18 Mapoly0123s0037 [PF04927] Seed maturation protein32.830.5982
19 Mapoly0138s0047 -35.140.6641
20 Mapoly0015s0170 [GO:0005515] protein binding; [PF07648] Kazal-type serine protease inhibitor domain38.110.6582
21 Mapoly0136s0033 -38.420.6665
22 Mapoly0081s0037 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [PTHR21071:SF3] gb def: UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) (UDP-N- acetylmuram; [GO:0050660] flavin adenine dinucleotide binding; [PF02873] UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR21071] UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE; [PF01565] FAD binding domain40.250.6163
23 Mapoly0226s0002 [PTHR12763] UNCHARACTERIZED; [PF00226] DnaJ domain; [KOG0723] Molecular chaperone (DnaJ superfamily)47.600.6813
24 Mapoly0064s0080 [KOG3224] Uncharacterized conserved protein; [PTHR21021] GAF/PUTATIVE CYTOSKELETAL PROTEIN; [PF04176] TIP41-like family50.420.6290
25 Mapoly0166s0013 [PF09415] CENP-S associating Centromere protein X; [GO:0051382] kinetochore assembly; [GO:0006281] DNA repair50.720.6411
26 Mapoly0023s0044 [PTHR12052:SF4] THIOREDOXIN-LIKE PROTEN 4A, 4B; [GO:0007067] mitosis; [GO:0005681] spliceosomal complex; [PTHR12052] THIOREDOXIN-LIKE PROTEN 4A, 4B; [KOG3414] Component of the U4/U6.U5 snRNP/mitosis protein DIM1; [PF02966] Mitosis protein DIM152.050.6097
27 Mapoly0007s0050 [KOG3245] Uncharacterized conserved protein; [PF07896] Protein of unknown function (DUF1674)52.250.6289
28 Mapoly0062s0098 [PF09229] Activator of Hsp90 ATPase, N-terminal; [GO:0051087] chaperone binding; [PTHR13009] HEAT SHOCK PROTEIN 90 (HSP90) CO-CHAPERONE AHA-1; [GO:0001671] ATPase activator activity52.490.6464
29 Mapoly0214s0005 [GO:0003951] NAD+ kinase activity; [GO:0006741] NADP biosynthetic process; [GO:0008152] metabolic process; [PTHR20275] FAMILY NOT NAMED; [PF01513] ATP-NAD kinase52.740.6710
30 Mapoly0103s0022 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN53.850.6226
31 Mapoly0007s0070 [PF08991] Domain of unknown function (DUF1903)53.980.6233
32 Mapoly0096s0024 [3.1.26.5] Ribonuclease P.; [PTHR10993] OCTANOYLTRANSFERASE; [K03537] ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]; [GO:0008033] tRNA processing; [PF01900] Rpp14/Pop5 family; [KOG4639] RNase P/RNase MRP subunit POP5; [GO:0004540] ribonuclease activity55.320.6077
33 Mapoly0115s0037 [KOG4058] Uncharacterized conserved protein; [PF13659] Methyltransferase domain; [PTHR13610] UNCHARACTERIZED; [PTHR13610:SF2] SUBFAMILY NOT NAMED56.920.6461
34 Mapoly0003s0263 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0884] Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K12734] peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]56.990.6701
35 Mapoly0032s0020 -60.930.5676
36 Mapoly0060s0010 [GO:0003796] lysozyme activity; [PF05497] Destabilase; [PTHR11195] DESTABILASE-RELATED; [PTHR11195:SF13] SUBFAMILY NOT NAMED; [PF01476] LysM domain61.340.6047
37 Mapoly2945s0001 -65.710.6682
38 Mapoly0052s0120 [K06664] peroxin-2; [PTHR12590:SF3] SUBFAMILY NOT NAMED; [KOG2879] Predicted E3 ubiquitin ligase; [PF04757] Pex2 / Pex12 amino terminal region; [PTHR12590] PEROXISOMAL PROTEIN RELATED66.080.6311
39 Mapoly0086s0048 [PTHR22936:SF17] RHOMBOID 1; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis66.880.6595
40 Mapoly0135s0030 -68.480.6323
41 Mapoly0113s0017 [K06170] presenilin enhancer 2; [KOG3402] Predicted membrane protein; [PTHR16318] GAMMA-SECRETASE SUBUNIT PEN-2; [PF10251] Presenilin enhancer-2 subunit of gamma secretase68.960.5564
42 Mapoly0003s0199 [KOG4723] Uncharacterized conserved protein; [PTHR16184] FAMILY NOT NAMED; [PF09807] Uncharacterized conserved protein (DUF2348)69.930.6700
43 Mapoly0027s0076 -70.410.6004
44 Mapoly0014s0200 [GO:0003723] RNA binding; [GO:0003743] translation initiation factor activity; [PF01176] Translation initiation factor 1A / IF-1; [PTHR21641] TRANSLATION INITIATION FACTOR-RELATED; [GO:0006413] translational initiation; [KOG2925] Predicted translation initiation factor related to eIF-1A73.200.6308
45 Mapoly0009s0100 -73.540.5389
46 Mapoly0191s0008 [PTHR13002] C3ORF1 PROTEIN-RELATED; [PF02466] Tim17/Tim22/Tim23/Pmp24 family77.360.5858
47 Mapoly0029s0123 [PTHR14269] CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED; [KOG1618] Predicted phosphatase; [PTHR14269:SF4] UNCHARACTERIZED; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like79.600.6034
48 Mapoly0036s0137 -81.110.6287
49 Mapoly0024s0083 [PTHR15959:SF0] SUBFAMILY NOT NAMED; [KOG3894] SNARE protein Syntaxin 18/UFE1; [PF10496] SNARE-complex protein Syntaxin-18 N-terminus; [PTHR15959] SYNTAXIN-18; [K08492] syntaxin 1883.480.6558
50 Mapoly0068s0046 [KOG3416] Predicted nucleic acid binding protein; [PTHR13356] OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED85.000.5933
Showing 1 to 50 of 200 records
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