Guide Gene

Gene ID
Mapoly0090s0068
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR10938] TRANSLATION INITIATION FACTOR IF-3; [K02520] translation initiation factor IF-3; [PF05198] Translation initiation factor IF-3, N-terminal domain; [GO:0003743] translation initiation factor activity; [PTHR10938:SF0] TRANSLATION INITIATION FACTOR IF-3; [GO:0006413] translational initiation; [PF00707] Translation initiation factor IF-3, C-terminal domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0090s0068 [PTHR10938] TRANSLATION INITIATION FACTOR IF-3; [K02520] translation initiation factor IF-3; [PF05198] Translation initiation factor IF-3, N-terminal domain; [GO:0003743] translation initiation factor activity; [PTHR10938:SF0] TRANSLATION INITIATION FACTOR IF-3; [GO:0006413] translational initiation; [PF00707] Translation initiation factor IF-3, C-terminal domain 0.00 1.0000
1 Mapoly0013s0111 [KOG1203] Predicted dehydrogenase; [PTHR14194] NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED; [PF05368] NmrA-like family2.830.9278
2 Mapoly0013s0196 [PTHR10949] LIPOYL SYNTHASE; [PF04055] Radical SAM superfamily; [GO:0051539] 4 iron, 4 sulfur cluster binding; [K03644] lipoic acid synthetase [EC:2.8.1.8]; [2.8.1.8] Lipoyl synthase.; [KOG2672] Lipoate synthase; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [GO:0009107] lipoate biosynthetic process; [GO:0016992] lipoate synthase activity4.470.9002
3 Mapoly0149s0016 [PF12527] Protein of unknown function (DUF3727)4.470.9040
4 Mapoly0012s0133 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [GO:0003676] nucleic acid binding; [PTHR24012:SF161] RNA-BINDING PROTEIN, PUTATIVE; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)4.690.9102
5 Mapoly0164s0013 [GO:0051087] chaperone binding; [PTHR21237] GRPE PROTEIN; [PF01025] GrpE; [PTHR21237:SF4] GRPE PROTEIN (HEAT SHOCK PROTEIN) (CGE1); [GO:0006457] protein folding; [GO:0042803] protein homodimerization activity; [K03687] molecular chaperone GrpE; [KOG3003] Molecular chaperone of the GrpE family; [GO:0000774] adenyl-nucleotide exchange factor activity11.620.8926
6 Mapoly0011s0163 [PTHR24193] ANKYRIN REPEAT PROTEIN; [KOG4214] Myotrophin and similar proteins; [PF12796] Ankyrin repeats (3 copies)13.750.9017
7 Mapoly0027s0042 [GO:0005840] ribosome; [PF01632] Ribosomal protein L35; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation14.420.9055
8 Mapoly0155s0027 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE14.800.8573
9 Mapoly0131s0004 [PF11493] Thylakoid soluble phosphoprotein TSP915.200.9067
10 Mapoly0064s0043 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [PF01636] Phosphotransferase enzyme family; [K08869] aarF domain-containing kinase15.490.8784
11 Mapoly0010s0209 [GO:0005524] ATP binding; [KOG2878] Predicted kinase; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [PTHR10285] URIDINE KINASE15.750.9018
12 Mapoly0001s0334 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PF00281] Ribosomal protein L5; [PTHR11994:SF4] 50S RIBOSOMAL PROTEIN L5; [K02931] large subunit ribosomal protein L5; [GO:0006412] translation; [KOG0398] Mitochondrial/chloroplast ribosomal protein L5/L7; [PTHR11994] 60S RIBOSOMAL PROTEIN L11-RELATED; [PF00673] ribosomal L5P family C-terminus19.440.9032
13 Mapoly0015s0129 [PTHR11540:SF9] MALATE DEHYDROGENASE, CYTOPLASMIC; [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [KOG1494] NAD-dependent malate dehydrogenase; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11540] MALATE AND LACTATE DEHYDROGENASE; [GO:0044262] cellular carbohydrate metabolic process; [1.1.1.37] Malate dehydrogenase.; [K00026] malate dehydrogenase [EC:1.1.1.37]21.420.8867
14 Mapoly0027s0011 [GO:0005840] ribosome; [PTHR15893:SF0] SUBFAMILY NOT NAMED; [GO:0003735] structural constituent of ribosome; [KOG4600] Mitochondrial ribosomal protein MRP7 (L2); [GO:0005622] intracellular; [PTHR15893] RIBOSOMAL PROTEIN L27; [GO:0006412] translation; [PF01016] Ribosomal L27 protein21.490.9040
15 Mapoly0152s0006 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain22.110.8203
16 Mapoly0084s0041 -25.300.8922
17 Mapoly0015s0044 [PTHR10996:SF22] HYDROXYPYRUVATE REDUCTASE; [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain26.150.8850
18 Mapoly0028s0124 -26.190.8479
19 Mapoly0019s0016 [PF00574] Clp protease; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit26.830.8713
20 Mapoly0005s0049 [GO:0005840] ribosome; [PTHR21011] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6; [KOG4708] Mitochondrial ribosomal protein MRP17; [PF01250] Ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0019843] rRNA binding; [GO:0006412] translation27.130.8151
21 Mapoly0009s0094 [GO:0004784] superoxide dismutase activity; [GO:0006801] superoxide metabolic process; [GO:0055114] oxidation-reduction process; [PF00081] Iron/manganese superoxide dismutases, alpha-hairpin domain; [PF02777] Iron/manganese superoxide dismutases, C-terminal domain; [PTHR11404:SF17] IRON SUPEROXIDE DISMUTASE; [PTHR11404] SUPEROXIDE DISMUTASE 2; [GO:0046872] metal ion binding; [KOG0876] Manganese superoxide dismutase27.870.8847
22 Mapoly0165s0020 [PF00574] Clp protease; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit28.670.8322
23 Mapoly0188s0012 [GO:0005506] iron ion binding; [PF00301] Rubredoxin29.290.8950
24 Mapoly0087s0077 [GO:0005840] ribosome; [PTHR13528] 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL; [GO:0003735] structural constituent of ribosome; [PTHR13528:SF2] SUBFAMILY NOT NAMED; [GO:0005622] intracellular; [GO:0006412] translation; [PF00830] Ribosomal L28 family33.240.8945
25 Mapoly0002s0250 [PTHR19288] 4-NITROPHENYLPHOSPHATASE-RELATED; [KOG2882] p-Nitrophenyl phosphatase; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like33.440.8701
26 Mapoly0001s0324 -33.670.8791
27 Mapoly0051s0056 [GO:0005840] ribosome; [PF01197] Ribosomal protein L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation34.640.8946
28 Mapoly0075s0043 [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PTHR23115:SF14] GTP-BINDING PROTEIN TYPA/BIPA; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein34.770.8504
29 Mapoly0074s0037 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732:SF7] ALDO-KETO REDUCTASE; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family36.330.8699
30 Mapoly0090s0063 [GO:0005840] ribosome; [PF01165] Ribosomal protein S21; [PTHR21109:SF0] SUBFAMILY NOT NAMED; [PTHR21109] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation37.040.8944
31 Mapoly0071s0090 -37.950.8681
32 Mapoly0213s0005 [5.3.1.6] Ribose-5-phosphate isomerase.; [GO:0009052] pentose-phosphate shunt, non-oxidative branch; [K01807] ribose 5-phosphate isomerase A [EC:5.3.1.6]; [PTHR11934] RIBOSE-5-PHOSPHATE ISOMERASE; [PTHR11934:SF1] RIBOSE 5-PHOSPHATE ISOMERASE; [KOG3075] Ribose 5-phosphate isomerase; [PF06026] Ribose 5-phosphate isomerase A (phosphoriboisomerase A); [GO:0004751] ribose-5-phosphate isomerase activity38.390.8844
33 Mapoly0097s0031 [GO:0045454] cell redox homeostasis; [PF10262] Rdx family; [PTHR15124] SELENOPROTEIN W; [GO:0008430] selenium binding38.950.8709
34 Mapoly0082s0060 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase45.000.8808
35 Mapoly0075s0045 [PTHR26312] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF13174] Tetratricopeptide repeat; [PF13432] Tetratricopeptide repeat45.230.8637
36 Mapoly0007s0090 [PF07466] Protein of unknown function (DUF1517)45.500.8517
37 Mapoly0008s0189 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [K02988] small subunit ribosomal protein S5; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain45.830.8849
38 Mapoly0119s0034 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [PTHR10108:SF234] UNCHARACTERIZED METHYLTRANSFERASE C70.08C47.480.8841
39 Mapoly0055s0124 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit48.280.8629
40 Mapoly0028s0084 [GO:0005515] protein binding; [PF01494] FAD binding domain; [1.14.13.90] Zeaxanthin epoxidase.; [KOG2614] Kynurenine 3-monooxygenase and related flavoprotein monooxygenases; [K09838] zeaxanthin epoxidase [EC:1.14.13.90]; [PF00498] FHA domain; [PTHR13789] MONOOXYGENASE48.990.8259
41 Mapoly0129s0003 [PTHR25040] FAMILY NOT NAMED; [PF00226] DnaJ domain49.480.8851
42 Mapoly0011s0141 [1.1.1.219] Dihydrokaempferol 4-reductase.; [K00091] dihydroflavonol-4-reductase [EC:1.1.1.219]; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE51.640.7354
43 Mapoly0003s0224 [GO:0005840] ribosome; [KOG3257] Mitochondrial/chloroplast ribosomal protein L11; [PF03946] Ribosomal protein L11, N-terminal domain; [GO:0003735] structural constituent of ribosome; [PTHR11661] 60S RIBOSOMAL PROTEIN L12; [PF00298] Ribosomal protein L11, RNA binding domain; [K02867] large subunit ribosomal protein L11; [GO:0006412] translation51.850.8790
44 Mapoly0037s0068 [GO:0016730] oxidoreductase activity, acting on iron-sulfur proteins as donors; [GO:0055114] oxidation-reduction process; [PF02943] Ferredoxin thioredoxin reductase catalytic beta chain51.940.8721
45 Mapoly0141s0024 [GO:0005524] ATP binding; [K09773] hypothetical protein; [PTHR31756] FAMILY NOT NAMED; [PF03618] Kinase/pyrophosphorylase; [GO:0016772] transferase activity, transferring phosphorus-containing groups52.120.7886
46 Mapoly0045s0081 [GO:0003723] RNA binding; [PTHR23270] PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5); [PF00575] S1 RNA binding domain52.920.8592
47 Mapoly0016s0114 [GO:0055114] oxidation-reduction process; [GO:0004392] heme oxygenase (decyclizing) activity; [PF01126] Heme oxygenase; [GO:0006788] heme oxidation; [KOG4480] Heme oxygenase53.750.8432
48 Mapoly0170s0017 -56.090.8803
49 Mapoly0050s0021 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase56.500.8658
50 Mapoly0118s0007 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN57.050.8778
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