Guide Gene

Gene ID
Mapoly0089s0033
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[2.7.1.71] Shikimate kinase.; [PF01202] Shikimate kinase; [PTHR21087] SHIKIMATE KINASE; [PTHR21087:SF0] SUBFAMILY NOT NAMED; [K00891] shikimate kinase [EC:2.7.1.71]

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0089s0033 [2.7.1.71] Shikimate kinase.; [PF01202] Shikimate kinase; [PTHR21087] SHIKIMATE KINASE; [PTHR21087:SF0] SUBFAMILY NOT NAMED; [K00891] shikimate kinase [EC:2.7.1.71] 0.00 1.0000
1 Mapoly0127s0017 [GO:0016192] vesicle-mediated transport; [PTHR21136] SNARE PROTEINS; [PTHR21136:SF5] SNARE PROTEIN YKT6; [GO:0016021] integral to membrane; [PF00957] Synaptobrevin; [K08516] synaptobrevin homolog YKT6; [PF13774] Regulated-SNARE-like domain; [KOG0861] SNARE protein YKT6, synaptobrevin/VAMP syperfamily4.470.7172
2 Mapoly0067s0083 [PF05562] Cold acclimation protein WCOR4135.200.7567
3 Mapoly0012s0074 [GO:0005524] ATP binding; [K01610] phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]; [PTHR30031:SF0] PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP]; [GO:0004612] phosphoenolpyruvate carboxykinase (ATP) activity; [PTHR30031] PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP]; [PF01293] Phosphoenolpyruvate carboxykinase; [GO:0006094] gluconeogenesis; [4.1.1.49] Phosphoenolpyruvate carboxykinase (ATP).5.660.7504
4 Mapoly0070s0008 [KOG0698] Serine/threonine protein phosphatase; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity8.000.7438
5 Mapoly0092s0071 [PF00923] Transaldolase; [PTHR10683] TRANSALDOLASE; [KOG2772] Transaldolase; [GO:0005975] carbohydrate metabolic process; [PTHR10683:SF3] TRANSALDOLASE 18.660.7388
6 Mapoly0013s0067 [PTHR13078] FAMILY NOT NAMED; [PF01575] MaoC like domain9.540.6306
7 Mapoly0121s0030 [PTHR15852] FAMILY NOT NAMED10.200.7222
8 Mapoly0004s0284 [PTHR12290:SF2] PHOSPHOPANTOTHENATE--CYSTEINE LIGASE; [K01922] phosphopantothenate-cysteine ligase [EC:6.3.2.5]; [6.3.2.5] Phosphopantothenate--cysteine ligase.; [PF04127] DNA / pantothenate metabolism flavoprotein; [PTHR12290] CORNICHON-RELATED; [KOG2728] Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase10.390.6689
9 Mapoly0127s0006 [K05391] cyclic nucleotide gated channel, other eukaryote; [PTHR10217] VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL18.490.6677
10 Mapoly0016s0008 [GO:0047617] acyl-CoA hydrolase activity; [K01068] palmitoyl-CoA hydrolase [EC:3.1.2.2]; [GO:0006637] acyl-CoA metabolic process; [PF00027] Cyclic nucleotide-binding domain; [3.1.2.2] Palmitoyl-CoA hydrolase.; [KOG3016] Acyl-CoA thioesterase; [PTHR11066] ACYL-COA THIOESTERASE; [PF13622] Thioesterase-like superfamily19.490.6904
11 Mapoly0126s0038 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11959] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [GO:0055114] oxidation-reduction process; [PTHR11959:SF1] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [1.13.11.27] 4-hydroxyphenylpyruvate dioxygenase.; [KOG0638] 4-hydroxyphenylpyruvate dioxygenase; [K00457] 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]; [GO:0016701] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; [GO:0003868] 4-hydroxyphenylpyruvate dioxygenase activity; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily19.620.7165
12 Mapoly0006s0108 -22.980.6708
13 Mapoly0123s0022 -24.980.6752
14 Mapoly0013s0121 [PF00235] Profilin; [GO:0030036] actin cytoskeleton organization; [PTHR11604] PROFILIN; [GO:0003779] actin binding; [PTHR11604:SF0] SUBFAMILY NOT NAMED; [KOG1755] Profilin25.810.7488
15 Mapoly0067s0007 -26.080.6093
16 Mapoly0099s0004 [3.2.1.26] Beta-fructofuranosidase.; [K01193] beta-fructofuranosidase [EC:3.2.1.26]; [PF00251] Glycosyl hydrolases family 32 N-terminal domain; [KOG0228] Beta-fructofuranosidase (invertase); [PTHR31953] FAMILY NOT NAMED; [PF08244] Glycosyl hydrolases family 32 C terminal27.750.7042
17 Mapoly0104s0017 [PF03372] Endonuclease/Exonuclease/phosphatase family; [PTHR12121] CARBON CATABOLITE REPRESSOR PROTEIN 430.000.6271
18 Mapoly0019s0012 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily32.940.6022
19 Mapoly0083s0064 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PTHR11711:SF31] ADP-RIBOSYLATION FACTOR-LIKE 5, ARL5; [PF00025] ADP-ribosylation factor family; [K07977] Arf/Sar family, other; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding33.260.6012
20 Mapoly0084s0014 [KOG0253] Synaptic vesicle transporter SV2 (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PTHR24064] FAMILY NOT NAMED; [GO:0022857] transmembrane transporter activity34.150.6214
21 Mapoly0021s0124 -35.720.6729
22 Mapoly0113s0032 [GO:0006396] RNA processing; [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF02170] PAZ domain; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0005515] protein binding; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [PF03368] Dicer dimerisation domain; [PF00270] DEAD/DEAH box helicase; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [GO:0003676] nucleic acid binding36.950.7008
23 Mapoly0082s0038 [KOG2964] Arginase family protein; [PTHR11358] ARGINASE/AGMATINASE; [3.5.3.1] Arginase.; [K01476] arginase [EC:3.5.3.1]; [PF00491] Arginase family; [GO:0046872] metal ion binding36.990.6498
24 Mapoly0043s0096 [2.7.1.4] Fructokinase.; [K00847] fructokinase [EC:2.7.1.4]; [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE38.300.7208
25 Mapoly0114s0039 [PF03018] Dirigent-like protein39.340.7361
26 Mapoly0029s0105 [PF04515] Plasma-membrane choline transporter; [PTHR12385] CTL TRANSPORTER39.800.6639
27 Mapoly0009s0150 [PF01039] Carboxyl transferase domain; [GO:0016874] ligase activity; [6.4.1.4] Methylcrotonoyl-CoA carboxylase.; [K01969] 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]; [KOG0540] 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta; [PTHR22855] ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED; [PTHR22855:SF13] ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE-RELATED39.890.6651
28 Mapoly0011s0135 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [PTHR24290] FAMILY NOT NAMED; [GO:0020037] heme binding; [PF00067] Cytochrome P45040.690.7092
29 Mapoly0081s0039 [K12162] ubiquitin-fold modifier 1; [PTHR15825] FAMILY NOT NAMED; [KOG3483] Uncharacterized conserved protein; [PTHR15825:SF0] SUBFAMILY NOT NAMED; [PF03671] Ubiquitin fold modifier 1 protein41.240.7290
30 Mapoly0151s0024 [GO:0000103] sulfate assimilation; [GO:0005524] ATP binding; [K00860] adenylylsulfate kinase [EC:2.7.1.25]; [PTHR11055] ADENYLSULFATE KINASE/SULFATE ADENYLTRANSFERASE; [2.7.1.25] Adenylyl-sulfate kinase.; [KOG0635] Adenosine 5'-phosphosulfate kinase; [GO:0004020] adenylylsulfate kinase activity; [PF01583] Adenylylsulphate kinase41.830.6818
31 Mapoly0020s0148 -41.950.6714
32 Mapoly0029s0035 [PF10604] Polyketide cyclase / dehydrase and lipid transport44.180.6462
33 Mapoly0041s0054 [PF00226] DnaJ domain; [PTHR24076] FAMILY NOT NAMED46.210.6692
34 Mapoly0062s0118 -46.480.6607
35 Mapoly0033s0161 [PTHR10281] MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED; [KOG1109] Vacuole membrane protein VMP1; [PF09335] SNARE associated Golgi protein; [PTHR10281:SF1] VACUOLE MEMBRANE PROTEIN 147.120.5909
36 Mapoly0087s0072 -51.180.6743
37 Mapoly0052s0064 [PF02136] Nuclear transport factor 2 (NTF2) domain; [PTHR12612:SF0] SUBFAMILY NOT NAMED; [GO:0006810] transport; [KOG2104] Nuclear transport factor 2; [GO:0005622] intracellular; [PTHR12612] NUCLEAR TRANSPORT FACTOR 255.150.6671
38 Mapoly0029s0027 [GO:0000287] magnesium ion binding; [PF00719] Inorganic pyrophosphatase; [3.6.1.1] Inorganic diphosphatase.; [GO:0004427] inorganic diphosphatase activity; [GO:0005737] cytoplasm; [K01507] inorganic pyrophosphatase [EC:3.6.1.1]; [GO:0006796] phosphate-containing compound metabolic process; [KOG1626] Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38; [PTHR10286] INORGANIC PYROPHOSPHATASE55.890.6880
39 Mapoly0033s0162 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding56.430.6996
40 Mapoly0146s0024 [PTHR24412] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif57.240.6450
41 Mapoly0170s0032 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0098] GTPase Rab2, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding57.240.6554
42 Mapoly0007s0088 [K08360] cytochrome b-561; [GO:0016021] integral to membrane; [KOG1619] Cytochrome b; [PTHR10106] CYTOCHROME B561-RELATED; [PF03188] Eukaryotic cytochrome b56157.450.6571
43 Mapoly0058s0038 [PF13405] EF-hand domain; [GO:0005509] calcium ion binding60.600.6987
44 Mapoly0027s0183 [PF00571] CBS domain; [KOG1764] 5'-AMP-activated protein kinase, gamma subunit; [PTHR13780] AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT; [GO:0030554] adenyl nucleotide binding60.790.6027
45 Mapoly0091s0055 [K13989] Derlin-2/3; [PF04511] Der1-like family; [KOG0858] Predicted membrane protein; [PTHR11009] DER1-LIKE PROTEIN, DERLIN62.990.6460
46 Mapoly0161s0004 [K01376] cathepsin V [EC:3.4.22.43]; [GO:0008234] cysteine-type peptidase activity; [PF00396] Granulin; [3.4.22.-] Cysteine endopeptidases.; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis63.610.6161
47 Mapoly0002s0292 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PF08031] Berberine and berberine like; [PTHR11748] D-LACTATE DEHYDROGENASE; [PF01565] FAD binding domain64.960.5836
48 Mapoly0075s0018 [PF04419] 4F5 protein family; [PTHR13596] SMALL EDRK-RICH FACTOR 167.740.7052
49 Mapoly0036s0014 -69.250.5802
50 Mapoly0054s0096 -70.360.6918
Showing 1 to 50 of 200 records
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