Guide Gene
- Gene ID
- Mapoly0082s0047
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0008270] zinc ion binding; [PTHR11685] RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING); [KOG1815] Predicted E3 ubiquitin ligase; [PF01485] IBR domain; [GO:0046872] metal ion binding; [K11968] ariadne-1
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0082s0047 [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0008270] zinc ion binding; [PTHR11685] RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING); [KOG1815] Predicted E3 ubiquitin ligase; [PF01485] IBR domain; [GO:0046872] metal ion binding; [K11968] ariadne-1 0.00 1.0000 1 Mapoly0084s0037 [GO:0046983] protein dimerization activity; [PTHR11800:SF2] DNA-DIRECTED RNA POLYMERASE II SUBUNIT 3; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF01000] RNA polymerase Rpb3/RpoA insert domain; [KOG1522] RNA polymerase II, subunit POLR2C/RPB3; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11800] DNA-DIRECTED RNA POLYMERASE; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PF01193] RNA polymerase Rpb3/Rpb11 dimerisation domain 2.00 0.7677 2 Mapoly0052s0012 [GO:0016020] membrane; [PF00520] Ion transport protein; [GO:0055085] transmembrane transport; [K05391] cyclic nucleotide gated channel, other eukaryote; [PTHR10217] VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL; [GO:0006811] ion transport; [PF00027] Cyclic nucleotide-binding domain; [GO:0005216] ion channel activity; [KOG0498] K+-channel ERG and related proteins, contain PAS/PAC sensor domain 2.83 0.7501 3 Mapoly0059s0060 [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING 4.90 0.7151 4 Mapoly0001s0284 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0005515] protein binding; [GO:0000160] phosphorelay signal transduction system; [KOG0519] Sensory transduction histidine kinase; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity; [PF01590] GAF domain 6.24 0.6909 5 Mapoly0043s0039 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PF13771] PHD-like zinc-binding domain 6.48 0.7373 6 Mapoly0006s0043 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [PF11523] Protein of unknown function (DUF3223); [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [PTHR19376:SF33] DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' 6.63 0.7316 7 Mapoly0031s0062 - 10.49 0.7212 8 Mapoly0028s0069 [GO:0008270] zinc ion binding; [PTHR11685] RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING); [PTHR11685:SF10] ARI-LIKE RING ZINC FINGER PROTEIN-RELATED; [KOG1815] Predicted E3 ubiquitin ligase; [PF01485] IBR domain 10.91 0.6794 9 Mapoly0169s0013 - 11.22 0.7086 10 Mapoly0071s0022 [PF14901] Cleavage inducing molecular chaperone; [KOG0720] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER 13.42 0.6743 11 Mapoly0111s0008 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [KOG0940] Ubiquitin protein ligase RSP5/NEDD4; [6.3.2.19] Ubiquitin--protein ligase.; [K10591] E3 ubiquitin-protein ligase NEDD4 [EC:6.3.2.19]; [GO:0004842] ubiquitin-protein ligase activity; [PF00632] HECT-domain (ubiquitin-transferase) 13.42 0.6784 12 Mapoly0027s0090 [GO:0008270] zinc ion binding; [PF01529] DHHC palmitoyltransferase; [KOG1311] DHHC-type Zn-finger proteins; [PTHR22883] ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 14.14 0.6453 13 Mapoly0086s0017 [GO:0005515] protein binding; [PTHR31482] FAMILY NOT NAMED; [PF00646] F-box domain 14.70 0.6171 14 Mapoly0045s0116 - 17.44 0.6756 15 Mapoly0080s0048 - 18.38 0.6591 16 Mapoly0115s0020 [PTHR31150] FAMILY NOT NAMED 18.89 0.6307 17 Mapoly0126s0031 [PTHR15117] ATAXIN 7 RELATED; [PTHR15117:SF0] SUBFAMILY NOT NAMED; [PF08313] SCA7, zinc-binding domain; [PF08209] Sgf11 (transcriptional regulation protein) 18.97 0.6484 18 Mapoly0011s0007 - 20.00 0.7043 19 Mapoly0168s0005 [PTHR14255:SF4] SUBFAMILY NOT NAMED; [PTHR14255] ATP-DEPENDENT PROTEASE (CEREBLON); [KOG1400] Predicted ATP-dependent protease PIL, contains LON domain; [GO:0004176] ATP-dependent peptidase activity; [K11793] cereblon; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis 20.49 0.6563 20 Mapoly0070s0005 [KOG0286] G-protein beta subunit; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat 22.18 0.6914 21 Mapoly0027s0118 [KOG2273] Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins; [PTHR10555] SORTING NEXIN; [PF00787] PX domain; [PF09325] Vps5 C terminal like; [GO:0035091] phosphatidylinositol binding 26.50 0.6463 22 Mapoly0086s0022 [PF13414] TPR repeat; [PTHR12197] SET AND MYND DOMAIN CONTAINING 29.66 0.6055 23 Mapoly0076s0037 [PF06101] Plant protein of unknown function (DUF946); [PF09333] ATG C terminal domain; [PF06650] Protein of unknown function (DUF1162); [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PTHR16166:SF61] PUTATIVE UNCHARACTERIZED PROTEIN 30.71 0.6671 24 Mapoly0024s0066 [GO:0005524] ATP binding; [GO:0005515] protein binding; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE; [PF00498] FHA domain 30.98 0.6808 25 Mapoly0009s0158 - 32.17 0.7022 26 Mapoly0079s0033 - 33.20 0.6465 27 Mapoly0184s0013 - 37.42 0.6197 28 Mapoly0053s0062 [PF12739] ER-Golgi trafficking TRAPP I complex 85 kDa subunit; [PTHR12975] TRANSPORT PROTEIN (TRAPP); [PTHR12975:SF6] SUBFAMILY NOT NAMED; [KOG1938] Protein with predicted involvement in meiosis (GSG1) 37.60 0.6830 29 Mapoly0105s0033 [PF07524] Bromodomain associated 37.96 0.6932 30 Mapoly0063s0002 [PF01480] PWI domain; [K13171] serine/arginine repetitive matrix protein 1; [PTHR23148] SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN; [GO:0006397] mRNA processing; [KOG2146] Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain) 39.62 0.6973 31 Mapoly0005s0266 [KOG1310] WD40 repeat protein; [PTHR15574] WD REPEAT DOMAIN-CONTAINING FAMILY; [GO:0005515] protein binding; [K11807] WD and tetratricopeptide repeats protein 1; [PF00400] WD domain, G-beta repeat 42.00 0.6575 32 Mapoly0100s0049 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 44.72 0.6313 33 Mapoly0046s0020 [GO:0005515] protein binding; [PTHR24128] FAMILY NOT NAMED; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PF13920] Zinc finger, C3HC4 type (RING finger) 46.50 0.6013 34 Mapoly0014s0060 [GO:0003677] DNA binding; [PF00046] Homeobox domain; [PTHR24326] FAMILY NOT NAMED; [PTHR24326:SF67] SUBFAMILY NOT NAMED; [KOG0492] Transcription factor MSH, contains HOX domain 47.96 0.5891 35 Mapoly0014s0032 [PTHR14873] FAMILY NOT NAMED; [PF10521] Protein of unknown function (DUF2454); [PTHR14873:SF1] SUBFAMILY NOT NAMED 48.29 0.6692 36 Mapoly0008s0106 [PF13716] Divergent CRAL/TRIO domain; [KOG2633] Hismacro and SEC14 domain-containing proteins; [PF01661] Macro domain; [PTHR11106] GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 49.18 0.6253 37 Mapoly0130s0023 [PF13837] Myb/SANT-like DNA-binding domain 49.48 0.6509 38 Mapoly0052s0063 [GO:0016020] membrane; [GO:0003333] amino acid transmembrane transport; [K13868] solute carrier family 7 (L-type amino acid transporter), member 9; [PF13520] Amino acid permease; [PTHR11785] AMINO ACID TRANSPORTER; [KOG1287] Amino acid transporters; [GO:0015171] amino acid transmembrane transporter activity 49.70 0.6222 39 Mapoly0013s0178 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00515] Tetratricopeptide repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 49.96 0.6801 40 Mapoly0010s0065 [PF04720] Protein of unknown function (DUF506); [PTHR31579] FAMILY NOT NAMED 51.44 0.6279 41 Mapoly0104s0012 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR14493] UNCHARACTERIZED; [GO:0046872] metal ion binding 51.63 0.6417 42 Mapoly0005s0094 [KOG2016] NEDD8-activating complex, APP-BP1/UBA5 component; [K04532] amyloid beta precursor protein binding protein 1; [PF00899] ThiF family; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity 54.55 0.5997 43 Mapoly0036s0086 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 54.77 0.5973 44 Mapoly0045s0119 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR13161] SPLICING FACTOR (SUPPRESSOR OF WHITE APRICOT); [PF01805] Surp module; [PF09750] Alternative splicing regulator; [KOG1847] mRNA splicing factor 56.68 0.6736 45 Mapoly0037s0132 [PF00450] Serine carboxypeptidase; [PTHR11802] SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE; [KOG1282] Serine carboxypeptidases (lysosomal cathepsin A); [GO:0004185] serine-type carboxypeptidase activity; [GO:0006508] proteolysis 56.78 0.5949 46 Mapoly0113s0036 [K07195] exocyst complex component 7; [PF03081] Exo70 exocyst complex subunit; [PTHR12542] EXOCYST COMPLEX PROTEIN EXO70; [GO:0000145] exocyst; [KOG2344] Exocyst component protein and related proteins; [GO:0006887] exocytosis 57.86 0.6036 47 Mapoly0067s0004 [KOG0005] Ubiquitin-like protein; [PTHR15204:SF1] SCYTHE/BAT3; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR15204] SCYTHE/BAT3 58.17 0.6360 48 Mapoly0021s0158 [GO:0008168] methyltransferase activity; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [PTHR11006:SF4] PROTEIN ARGININE N-METHYLTRANSFERASE 7; [GO:0006479] protein methylation 58.40 0.6263 49 Mapoly0020s0030 [PF15346] Arginine and glutamate-rich 1; [PTHR31711] FAMILY NOT NAMED 59.60 0.6325 50 Mapoly0107s0019 [PF01501] Glycosyl transferase family 8; [2.4.1.43] Polygalacturonate 4-alpha-galacturonosyltransferase.; [K13648] alpha-1,4-galacturonosyltransferase [EC:2.4.1.43]; [PTHR32116] FAMILY NOT NAMED; [PTHR32116:SF4] SUBFAMILY NOT NAMED; [GO:0016757] transferase activity, transferring glycosyl groups 60.33 0.5813