Guide Gene

Gene ID
Mapoly0058s0077
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG3137] Peptide deformylase; [GO:0005506] iron ion binding; [PF01327] Polypeptide deformylase; [3.5.1.88] Peptide deformylase.; [GO:0042586] peptide deformylase activity; [K01462] peptide deformylase [EC:3.5.1.88]; [PTHR10458] PEPTIDE DEFORMYLASE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0058s0077 [KOG3137] Peptide deformylase; [GO:0005506] iron ion binding; [PF01327] Polypeptide deformylase; [3.5.1.88] Peptide deformylase.; [GO:0042586] peptide deformylase activity; [K01462] peptide deformylase [EC:3.5.1.88]; [PTHR10458] PEPTIDE DEFORMYLASE 0.00 1.0000
1 Mapoly0047s0047 -5.480.9069
2 Mapoly0151s0005 [PTHR14154] UPF0041 BRAIN PROTEIN 44-RELATED; [PTHR14154:SF7] UNCHARACTERIZED5.480.9148
3 Mapoly0149s0008 -9.060.9134
4 Mapoly0087s0077 [GO:0005840] ribosome; [PTHR13528] 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL; [GO:0003735] structural constituent of ribosome; [PTHR13528:SF2] SUBFAMILY NOT NAMED; [GO:0005622] intracellular; [GO:0006412] translation; [PF00830] Ribosomal L28 family13.190.9098
5 Mapoly0015s0006 [PF13225] Domain of unknown function (DUF4033)15.750.8632
6 Mapoly0074s0037 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732:SF7] ALDO-KETO REDUCTASE; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family16.160.8830
7 Mapoly0090s0093 -16.850.9098
8 Mapoly0119s0034 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [PTHR10108:SF234] UNCHARACTERIZED METHYLTRANSFERASE C70.08C20.050.9019
9 Mapoly0140s0013 [PTHR22854:SF2] INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; [PTHR22854] TRYPTOPHAN BIOSYNTHESIS PROTEIN; [PF00218] Indole-3-glycerol phosphate synthase; [GO:0004425] indole-3-glycerol-phosphate synthase activity21.450.8335
10 Mapoly0101s0039 [PTHR11804] PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED22.450.8968
11 Mapoly0083s0037 [GO:0008565] protein transporter activity; [GO:0015031] protein transport; [PF02416] mttA/Hcf106 family23.470.8919
12 Mapoly0129s0003 [PTHR25040] FAMILY NOT NAMED; [PF00226] DnaJ domain26.320.8993
13 Mapoly0006s0145 -26.680.8976
14 Mapoly0070s0085 [GO:0016020] membrane; [PF00584] SecE/Sec61-gamma subunits of protein translocation complex; [GO:0006605] protein targeting; [GO:0006886] intracellular protein transport28.250.8655
15 Mapoly0108s0057 -30.980.8936
16 Mapoly0108s0060 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [K02293] phytoene dehydrogenase, phytoene desaturase [EC:1.14.99.-]; [GO:0016491] oxidoreductase activity; [1.14.99.-] Miscellaneous (requires further characterization).; [KOG0029] Amine oxidase30.980.8501
17 Mapoly0051s0056 [GO:0005840] ribosome; [PF01197] Ribosomal protein L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation31.300.8955
18 Mapoly0002s0258 [PF03703] Bacterial PH domain31.840.8770
19 Mapoly0188s0012 [GO:0005506] iron ion binding; [PF00301] Rubredoxin32.050.8949
20 Mapoly0021s0084 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0544] FKBP-type peptidyl-prolyl cis-trans isomerase32.470.8931
21 Mapoly0009s0107 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [K02946] small subunit ribosomal protein S10; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e33.090.8946
22 Mapoly0114s0054 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]33.170.8672
23 Mapoly0131s0004 [PF11493] Thylakoid soluble phosphoprotein TSP934.120.8950
24 Mapoly0006s0262 [GO:0005840] ribosome; [KOG1708] Mitochondrial/chloroplast ribosomal protein L24; [PF00467] KOW motif; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12903:SF1] gb def: f59a3.3.p [caenorhabditis elegans]; [GO:0006412] translation; [PTHR12903] MITOCHONDRIAL RIBOSOMAL PROTEIN L2435.570.8954
25 Mapoly0001s0161 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation36.660.8948
26 Mapoly0057s0063 [PTHR14136] UNCHARACTERIZED; [PF00805] Pentapeptide repeats (8 copies)36.930.8896
27 Mapoly0043s0046 [GO:0005840] ribosome; [PF00468] Ribosomal protein L34; [GO:0003735] structural constituent of ribosome; [PTHR14503] FAMILY NOT NAMED; [PTHR14503:SF0] SUBFAMILY NOT NAMED; [GO:0005622] intracellular; [GO:0006412] translation37.230.8924
28 Mapoly0005s0050 [PTHR10949] LIPOYL SYNTHASE; [PF02941] Ferredoxin thioredoxin reductase variable alpha chain; [GO:0051539] 4 iron, 4 sulfur cluster binding; [GO:0009107] lipoate biosynthetic process; [GO:0016992] lipoate synthase activity; [GO:0015979] photosynthesis38.670.8877
29 Mapoly0164s0013 [GO:0051087] chaperone binding; [PTHR21237] GRPE PROTEIN; [PF01025] GrpE; [PTHR21237:SF4] GRPE PROTEIN (HEAT SHOCK PROTEIN) (CGE1); [GO:0006457] protein folding; [GO:0042803] protein homodimerization activity; [K03687] molecular chaperone GrpE; [KOG3003] Molecular chaperone of the GrpE family; [GO:0000774] adenyl-nucleotide exchange factor activity40.560.8704
30 Mapoly0068s0039 -41.710.8205
31 Mapoly0006s0309 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [PTHR10293] GLUTAREDOXIN-RELATED PROTEIN42.360.8707
32 Mapoly0064s0043 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [PF01636] Phosphotransferase enzyme family; [K08869] aarF domain-containing kinase42.430.8544
33 Mapoly0170s0017 -42.430.8910
34 Mapoly0027s0042 [GO:0005840] ribosome; [PF01632] Ribosomal protein L35; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation43.010.8868
35 Mapoly0149s0016 [PF12527] Protein of unknown function (DUF3727)44.090.8679
36 Mapoly0001s0324 -44.430.8745
37 Mapoly0014s0126 [PTHR14136] UNCHARACTERIZED; [PF13599] Pentapeptide repeats (9 copies)45.230.8822
38 Mapoly0111s0023 [GO:0046422] violaxanthin de-epoxidase activity; [PF07137] Violaxanthin de-epoxidase (VDE); [GO:0055114] oxidation-reduction process; [K09839] violaxanthin de-epoxidase [EC:1.10.99.3]; [GO:0009507] chloroplast; [1.10.99.3] Violaxanthin de-epoxidase.45.480.8733
39 Mapoly0016s0095 [PTHR21631] ISOCITRATE LYASE/MALATE SYNTHASE; [PF13714] Phosphoenolpyruvate phosphomutase45.690.7784
40 Mapoly0046s0114 -46.320.8788
41 Mapoly0011s0163 [PTHR24193] ANKYRIN REPEAT PROTEIN; [KOG4214] Myotrophin and similar proteins; [PF12796] Ankyrin repeats (3 copies)46.580.8790
42 Mapoly0001s0169 [PF09353] Domain of unknown function (DUF1995)46.990.8429
43 Mapoly0002s0098 [PF13806] Rieske-like [2Fe-2S] domain48.740.8809
44 Mapoly0032s0146 [K01661] naphthoate synthase [EC:4.1.3.36]; [PF00378] Enoyl-CoA hydratase/isomerase family; [4.1.3.36] 1,4-dihydroxy-2-naphthoyl-CoA synthase.; [KOG1680] Enoyl-CoA hydratase; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR11941] ENOYL-COA HYDRATASE-RELATED49.390.7762
45 Mapoly0060s0071 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [K02881] large subunit ribosomal protein L18; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation49.720.8875
46 Mapoly0118s0007 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN49.920.8832
47 Mapoly0011s0026 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG3436] 60S ribosomal protein L35; [PTHR10916] 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29; [GO:0005622] intracellular; [PTHR10916:SF0] 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29; [PF00831] Ribosomal L29 protein; [GO:0006412] translation49.990.8909
48 Mapoly0034s0024 -51.000.7689
49 Mapoly0005s0194 -51.440.8833
50 Mapoly0005s0049 [GO:0005840] ribosome; [PTHR21011] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6; [KOG4708] Mitochondrial ribosomal protein MRP17; [PF01250] Ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0019843] rRNA binding; [GO:0006412] translation52.620.7915
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