Guide Gene

Gene ID
Mapoly0047s0044
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006289] nucleotide-excision repair; [KOG3471] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2; [GO:0005634] nucleus; [PTHR13152] TFIIH, POLYPEPTIDE 4; [PF03849] Transcription factor Tfb2; [K03144] transcription initiation factor TFIIH subunit 4; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0000439] core TFIIH complex

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0047s0044 [GO:0006289] nucleotide-excision repair; [KOG3471] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2; [GO:0005634] nucleus; [PTHR13152] TFIIH, POLYPEPTIDE 4; [PF03849] Transcription factor Tfb2; [K03144] transcription initiation factor TFIIH subunit 4; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0000439] core TFIIH complex 0.00 1.0000
1 Mapoly0033s0164 [PTHR11246] PRE-MRNA SPLICING FACTOR; [PTHR11246:SF5] XPA-BINDING PROTEIN 2 (HCNP PROTEIN)1.000.7853
2 Mapoly0047s0043 [GO:0007205] protein kinase C-activating G-protein coupled receptor signaling pathway; [GO:0004143] diacylglycerol kinase activity; [K07029] mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]; [PF00781] Diacylglycerol kinase catalytic domain; [PTHR12358] SPHINGOSINE KINASE2.000.7481
3 Mapoly0051s0038 [GO:0003723] RNA binding; [PTHR32219] FAMILY NOT NAMED; [KOG4837] Uncharacterized conserved protein; [PF01479] S4 domain3.000.7313
4 Mapoly0126s0033 -3.610.6530
5 Mapoly0132s0018 [GO:0008168] methyltransferase activity; [GO:0032259] methylation; [PF04072] Leucine carboxyl methyltransferase6.320.6969
6 Mapoly0002s0272 [PTHR12497:SF0] SUBFAMILY NOT NAMED; [PF01553] Acyltransferase; [GO:0008152] metabolic process; [GO:0016746] transferase activity, transferring acyl groups; [KOG2847] Phosphate acyltransferase; [GO:0006644] phospholipid metabolic process; [PTHR12497] TAZ PROTEIN (TAFAZZIN)7.350.6942
7 Mapoly0096s0035 [PTHR13617] FAMILY NOT NAMED; [KOG1551] Uncharacterized conserved protein; [PF09752] Uncharacterized conserved protein (DUF2048)8.000.7092
8 Mapoly0008s0269 -8.490.6677
9 Mapoly0006s0170 -11.220.6275
10 Mapoly0028s0128 -12.410.6421
11 Mapoly0028s0125 [PF07719] Tetratricopeptide repeat; [PTHR12197:SF13] SET AND MYND DOMAIN CONTAINING; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00856] SET domain; [PTHR12197] SET AND MYND DOMAIN CONTAINING14.070.6337
12 Mapoly0084s0007 [KOG4313] Thiamine pyrophosphokinase; [GO:0016787] hydrolase activity; [PF00293] NUDIX domain; [PTHR13622] THIAMIN PYROPHOSPHOKINASE14.490.6930
13 Mapoly0019s0106 [KOG0143] Iron/ascorbate family oxidoreductases; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN15.170.6640
14 Mapoly0103s0032 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin16.580.6214
15 Mapoly0168s0021 [GO:0004555] alpha,alpha-trehalase activity; [PTHR10412] MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE; [GO:0005991] trehalose metabolic process; [PF01204] Trehalase18.650.6151
16 Mapoly0028s0051 [KOG1577] Aldo/keto reductase family proteins; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family21.910.6140
17 Mapoly0001s0095 -22.960.6345
18 Mapoly0006s0169 -25.790.6312
19 Mapoly0042s0040 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED26.380.6238
20 Mapoly0183s0019 -26.550.6383
21 Mapoly0075s0055 -28.140.6621
22 Mapoly0204s0005 [PTHR11935] BETA LACTAMASE DOMAIN; [KOG0813] Glyoxylase; [PF00753] Metallo-beta-lactamase superfamily28.460.6179
23 Mapoly0102s0005 [PF06962] Putative rRNA methylase28.570.6678
24 Mapoly0039s0092 [GO:0003677] DNA binding; [KOG2732] DNA polymerase delta, regulatory subunit 55; [GO:0006260] DNA replication; [PTHR10416] DNA POLYMERASE DELTA SUBUNIT 2; [PF04042] DNA polymerase alpha/epsilon subunit B; [GO:0003887] DNA-directed DNA polymerase activity; [PTHR10416:SF0] DNA POLYMERASE DELTA SUBUNIT 2; [K02328] DNA polymerase delta subunit 228.980.5665
25 Mapoly0072s0090 [PTHR21477] FAMILY NOT NAMED31.750.5544
26 Mapoly0108s0048 [PF05254] Uncharacterised protein family (UPF0203); [PTHR21329:SF8] SUBFAMILY NOT NAMED; [PTHR21329] PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED34.210.6208
27 Mapoly0010s0066 [KOG0620] Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins; [PF03372] Endonuclease/Exonuclease/phosphatase family; [PTHR12121] CARBON CATABOLITE REPRESSOR PROTEIN 440.000.5459
28 Mapoly0067s0013 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10920] RIBOSOMAL RNA METHYLTRANSFERASE; [GO:0032259] methylation; [PF01728] FtsJ-like methyltransferase; [GO:0001510] RNA methylation; [K02427] ribosomal RNA large subunit methyltransferase E [EC:2.1.1.-]; [KOG1099] SAM-dependent methyltransferase/cell division protein FtsJ40.690.5571
29 Mapoly0094s0013 -45.430.6565
30 Mapoly0042s0124 -46.130.6152
31 Mapoly0124s0018 [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity47.370.5574
32 Mapoly0007s0017 [KOG3200] Uncharacterized conserved protein; [K10768] alkylated DNA repair protein alkB homolog 6; [PTHR13069:SF11] SUBFAMILY NOT NAMED; [PTHR13069] UNCHARACTERIZED; [PF13532] 2OG-Fe(II) oxygenase superfamily49.480.6080
33 Mapoly0004s0198 [KOG4495] RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN49.820.5080
34 Mapoly0004s0263 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF13516] Leucine Rich repeat; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE55.150.5479
35 Mapoly0209s0001 [KOG3150] Uncharacterized conserved protein; [PF05608] Protein of unknown function (DUF778); [PTHR20921] UNCHARACTERIZED; [PTHR20921:SF1] gb def: Hypothetical protein56.890.5434
36 Mapoly0046s0116 [PF11326] Protein of unknown function (DUF3128)58.970.5775
37 Mapoly0001s0471 [PTHR22936:SF2] gb def: Hypothetical protein; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis59.900.5954
38 Mapoly0015s0007 -60.790.6264
39 Mapoly0001s0437 [PF10241] Uncharacterized conserved protein; [PTHR13511:SF0] SUBFAMILY NOT NAMED; [PTHR13511] UNCHARACTERIZED66.960.5211
40 Mapoly0152s0023 -67.170.6357
41 Mapoly0035s0044 [GO:0003677] DNA binding; [PTHR10133] DNA POLYMERASE I; [PF01367] 5'-3' exonuclease, C-terminal SAM fold; [GO:0003824] catalytic activity; [PF02739] 5'-3' exonuclease, N-terminal resolvase-like domain67.680.6291
42 Mapoly0060s0010 [GO:0003796] lysozyme activity; [PF05497] Destabilase; [PTHR11195] DESTABILASE-RELATED; [PTHR11195:SF13] SUBFAMILY NOT NAMED; [PF01476] LysM domain70.350.5740
43 Mapoly0127s0046 -73.180.5281
44 Mapoly0202s0015 -74.420.5550
45 Mapoly0059s0024 -75.470.5601
46 Mapoly0092s0063 [PF03235] Protein of unknown function DUF26276.810.5739
47 Mapoly0005s0251 [PTHR20922] UNCHARACTERIZED; [GO:0008270] zinc ion binding; [PF05180] DNL zinc finger78.100.5299
48 Mapoly0042s0014 [KOG2610] Uncharacterized conserved protein; [PTHR16263] FAMILY NOT NAMED78.130.5967
49 Mapoly0149s0026 [PTHR10211:SF0] DEOXYRIBODIPYRIMIDINE PHOTOLYASE; [K01669] deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]; [GO:0003913] DNA photolyase activity; [KOG0133] Deoxyribodipyrimidine photolyase/cryptochrome; [PF00875] DNA photolyase; [GO:0003904] deoxyribodipyrimidine photo-lyase activity; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair; [PTHR10211] DEOXYRIBODIPYRIMIDINE PHOTOLYASE; [4.1.99.3] Deoxyribodipyrimidine photo-lyase.78.490.5480
50 Mapoly0013s0170 -79.500.5932
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