Guide Gene

Gene ID
Mapoly0045s0148
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF02861] Clp amino terminal domain; [PTHR11638] ATP-DEPENDENT CLP PROTEASE; [GO:0019538] protein metabolic process

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0045s0148 [PF02861] Clp amino terminal domain; [PTHR11638] ATP-DEPENDENT CLP PROTEASE; [GO:0019538] protein metabolic process 0.00 1.0000
1 Mapoly0008s0014 [PF00364] Biotin-requiring enzyme; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE2.830.9385
2 Mapoly0087s0077 [GO:0005840] ribosome; [PTHR13528] 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL; [GO:0003735] structural constituent of ribosome; [PTHR13528:SF2] SUBFAMILY NOT NAMED; [GO:0005622] intracellular; [GO:0006412] translation; [PF00830] Ribosomal L28 family4.690.9485
3 Mapoly0181s0002 [PTHR10772] 10 KDA HEAT SHOCK PROTEIN; [KOG1641] Mitochondrial chaperonin; [GO:0005737] cytoplasm; [PF00166] Chaperonin 10 Kd subunit; [GO:0006457] protein folding6.160.9210
4 Mapoly0019s0016 [PF00574] Clp protease; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit6.780.9194
5 Mapoly0001s0334 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PF00281] Ribosomal protein L5; [PTHR11994:SF4] 50S RIBOSOMAL PROTEIN L5; [K02931] large subunit ribosomal protein L5; [GO:0006412] translation; [KOG0398] Mitochondrial/chloroplast ribosomal protein L5/L7; [PTHR11994] 60S RIBOSOMAL PROTEIN L11-RELATED; [PF00673] ribosomal L5P family C-terminus7.350.9442
6 Mapoly0006s0053 -7.870.9094
7 Mapoly0003s0224 [GO:0005840] ribosome; [KOG3257] Mitochondrial/chloroplast ribosomal protein L11; [PF03946] Ribosomal protein L11, N-terminal domain; [GO:0003735] structural constituent of ribosome; [PTHR11661] 60S RIBOSOMAL PROTEIN L12; [PF00298] Ribosomal protein L11, RNA binding domain; [K02867] large subunit ribosomal protein L11; [GO:0006412] translation8.660.9429
8 Mapoly0001s0161 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation11.660.9422
9 Mapoly0060s0071 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [K02881] large subunit ribosomal protein L18; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation12.450.9414
10 Mapoly0027s0042 [GO:0005840] ribosome; [PF01632] Ribosomal protein L35; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation13.230.9387
11 Mapoly0051s0056 [GO:0005840] ribosome; [PF01197] Ribosomal protein L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation13.860.9412
12 Mapoly0035s0116 -14.490.9103
13 Mapoly0213s0011 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit14.490.9205
14 Mapoly0164s0013 [GO:0051087] chaperone binding; [PTHR21237] GRPE PROTEIN; [PF01025] GrpE; [PTHR21237:SF4] GRPE PROTEIN (HEAT SHOCK PROTEIN) (CGE1); [GO:0006457] protein folding; [GO:0042803] protein homodimerization activity; [K03687] molecular chaperone GrpE; [KOG3003] Molecular chaperone of the GrpE family; [GO:0000774] adenyl-nucleotide exchange factor activity15.300.8975
15 Mapoly0125s0036 [PF11833] Protein of unknown function (DUF3353)15.870.8988
16 Mapoly0147s0023 [KOG0541] Alkyl hydroperoxide reductase/peroxiredoxin; [PTHR10430:SF10] PEROXIREDOXIN; [GO:0016491] oxidoreductase activity; [GO:0006457] protein folding; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [PF08534] Redoxin; [PTHR10430] PEROXIREDOXIN16.120.8734
17 Mapoly0004s0030 [PTHR19370] NADH-CYTOCHROME B5 REDUCTASE; [GO:0055114] oxidation-reduction process; [KOG0534] NADH-cytochrome b-5 reductase; [PF00175] Oxidoreductase NAD-binding domain; [GO:0016491] oxidoreductase activity16.580.8808
18 Mapoly0045s0080 [GO:0004659] prenyltransferase activity; [GO:0016021] integral to membrane; [2.5.1.62] Chlorophyll synthase.; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family; [K04040] chlorophyll synthase [EC:2.5.1.62]; [KOG1381] Para-hydroxybenzoate-polyprenyl transferase17.030.8783
19 Mapoly0066s0055 [PF04278] Tic22-like family17.200.8673
20 Mapoly0115s0051 [GO:0042254] ribosome biogenesis; [PTHR11560] FAMILY NOT NAMED; [GO:0005622] intracellular; [PF00466] Ribosomal protein L10; [PTHR11560:SF8] SUBFAMILY NOT NAMED18.250.9382
21 Mapoly0026s0019 [GO:0005840] ribosome; [PF04839] Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65); [GO:0003735] structural constituent of ribosome; [GO:0006412] translation18.760.9335
22 Mapoly0029s0025 -18.840.8682
23 Mapoly0170s0017 -19.490.9351
24 Mapoly0009s0159 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PF01649] Ribosomal protein S20; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation21.070.9306
25 Mapoly0082s0046 [GO:0005515] protein binding; [KOG1422] Intracellular Cl- channel CLIC, contains GST domain; [PF13417] Glutathione S-transferase, N-terminal domain; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING21.280.8255
26 Mapoly0043s0046 [GO:0005840] ribosome; [PF00468] Ribosomal protein L34; [GO:0003735] structural constituent of ribosome; [PTHR14503] FAMILY NOT NAMED; [PTHR14503:SF0] SUBFAMILY NOT NAMED; [GO:0005622] intracellular; [GO:0006412] translation22.450.9251
27 Mapoly0005s0245 [GO:0005840] ribosome; [PF00347] Ribosomal protein L6; [GO:0003735] structural constituent of ribosome; [GO:0019843] rRNA binding; [PTHR11655] 60S/50S RIBOSOMAL PROTEIN L6/L9; [KOG3254] Mitochondrial/chloroplast ribosomal protein L6; [GO:0006412] translation25.100.9249
28 Mapoly0014s0158 [PTHR10772] 10 KDA HEAT SHOCK PROTEIN; [KOG1641] Mitochondrial chaperonin; [GO:0005737] cytoplasm; [PTHR10772:SF0] 10 KDA HEAT SHOCK PROTEIN; [PF00166] Chaperonin 10 Kd subunit; [GO:0006457] protein folding25.100.8918
29 Mapoly0013s0204 [GO:0005840] ribosome; [PTHR14413] RIBOSOMAL PROTEIN L17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01196] Ribosomal protein L17; [KOG3280] Mitochondrial/chloroplast ribosomal protein L17; [K02879] large subunit ribosomal protein L17; [GO:0006412] translation25.300.9241
30 Mapoly0005s0194 -27.500.9234
31 Mapoly0006s0262 [GO:0005840] ribosome; [KOG1708] Mitochondrial/chloroplast ribosomal protein L24; [PF00467] KOW motif; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12903:SF1] gb def: f59a3.3.p [caenorhabditis elegans]; [GO:0006412] translation; [PTHR12903] MITOCHONDRIAL RIBOSOMAL PROTEIN L2427.690.9254
32 Mapoly0090s0093 -28.270.9240
33 Mapoly0055s0124 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit30.300.8820
34 Mapoly0005s0275 [GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [K02906] large subunit ribosomal protein L3; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation30.400.9201
35 Mapoly0133s0011 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process31.300.9151
36 Mapoly0007s0079 [KOG1308] Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein; [PTHR22904] TPR REPEAT CONTAINING PROTEIN31.940.8598
37 Mapoly0056s0039 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation32.370.8337
38 Mapoly0031s0078 [GO:0005515] protein binding; [PF00043] Glutathione S-transferase, C-terminal domain; [PF13417] Glutathione S-transferase, N-terminal domain; [KOG0867] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING33.000.8508
39 Mapoly0040s0061 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase33.760.8626
40 Mapoly0011s0026 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG3436] 60S ribosomal protein L35; [PTHR10916] 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29; [GO:0005622] intracellular; [PTHR10916:SF0] 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29; [PF00831] Ribosomal L29 protein; [GO:0006412] translation34.930.9206
41 Mapoly0009s0107 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [K02946] small subunit ribosomal protein S10; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e35.710.9178
42 Mapoly0115s0060 [GO:0005840] ribosome; [PTHR21011] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6; [PTHR21011:SF3] SUBFAMILY NOT NAMED; [PF01250] Ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0019843] rRNA binding; [GO:0006412] translation36.660.9178
43 Mapoly0041s0035 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit36.950.8991
44 Mapoly0047s0137 -37.230.8953
45 Mapoly0071s0038 [GO:0005840] ribosome; [K02935] large subunit ribosomal protein L7/L12; [PTHR11809] RIBOSOMAL PROTEIN L7/L12; [GO:0003735] structural constituent of ribosome; [KOG1715] Mitochondrial/chloroplast ribosomal protein L12; [GO:0005622] intracellular; [PF00542] Ribosomal protein L7/L12 C-terminal domain; [GO:0006412] translation38.500.9158
46 Mapoly0098s0024 [PTHR12735:SF6] BSL5715 PROTEIN; [PTHR12735] BOLA-LIKE PROTEIN-RELATED; [KOG3348] BolA (bacterial stress-induced morphogen)-related protein; [PF01722] BolA-like protein38.770.8162
47 Mapoly0027s0011 [GO:0005840] ribosome; [PTHR15893:SF0] SUBFAMILY NOT NAMED; [GO:0003735] structural constituent of ribosome; [KOG4600] Mitochondrial ribosomal protein MRP7 (L2); [GO:0005622] intracellular; [PTHR15893] RIBOSOMAL PROTEIN L27; [GO:0006412] translation; [PF01016] Ribosomal L27 protein38.880.9157
48 Mapoly0026s0044 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [K13789] geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.1] Dimethylallyltranstransferase.; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.10] (2E,6E)-farnesyl diphosphate synthase.; [PTHR12001:SF23] SUBFAMILY NOT NAMED; [2.5.1.29] Geranylgeranyl diphosphate synthase.39.240.8432
49 Mapoly0047s0047 -40.530.8826
50 Mapoly0120s0006 [GO:0009231] riboflavin biosynthetic process; [PTHR21058] 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE (DMRL SYNTHASE) (LUMAZINE SYNTHASE); [PF00885] 6,7-dimethyl-8-ribityllumazine synthase; [GO:0009349] riboflavin synthase complex; [KOG3243] 6,7-dimethyl-8-ribityllumazine synthase; [K00794] 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]; [2.5.1.78] 6,7-dimethyl-8-ribityllumazine synthase.; [PTHR21058:SF0] SUBFAMILY NOT NAMED40.740.8168
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