Guide Gene

Gene ID
Mapoly0035s0030
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006221] pyrimidine nucleotide biosynthetic process; [PF06418] CTP synthase N-terminus; [KOG2387] CTP synthase (UTP-ammonia lyase); [K01937] CTP synthase [EC:6.3.4.2]; [PTHR11550] CTP SYNTHASE; [GO:0003883] CTP synthase activity; [6.3.4.2] CTP synthase (glutamine hydrolyzing).; [PF00117] Glutamine amidotransferase class-I

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0035s0030 [GO:0006221] pyrimidine nucleotide biosynthetic process; [PF06418] CTP synthase N-terminus; [KOG2387] CTP synthase (UTP-ammonia lyase); [K01937] CTP synthase [EC:6.3.4.2]; [PTHR11550] CTP SYNTHASE; [GO:0003883] CTP synthase activity; [6.3.4.2] CTP synthase (glutamine hydrolyzing).; [PF00117] Glutamine amidotransferase class-I 0.00 1.0000
1 Mapoly0026s0110 [GO:0004198] calcium-dependent cysteine-type endopeptidase activity; [PF00648] Calpain family cysteine protease; [PF01067] Calpain large subunit, domain III; [PTHR10183] CALPAIN; [GO:0005622] intracellular; [KOG0045] Cytosolic Ca2+-dependent cysteine protease (calpain), large subunit (EF-Hand protein superfamily); [PF13385] Concanavalin A-like lectin/glucanases superfamily; [GO:0006508] proteolysis11.180.6488
2 Mapoly0010s0191 [PF04055] Radical SAM superfamily; [PTHR13930] RSAFD1-RELATED; [PF00258] Flavodoxin; [PF08608] Wyosine base formation; [GO:0016491] oxidoreductase activity; [PTHR13930:SF0] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [KOG1160] Fe-S oxidoreductase; [GO:0010181] FMN binding14.560.6821
3 Mapoly0033s0012 [GO:0005524] ATP binding; [2.5.1.75] tRNA dimethylallyltransferase.; [PTHR11088] TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED; [K00791] tRNA dimethylallyltransferase [EC:2.5.1.75]; [GO:0008033] tRNA processing; [PF01715] IPP transferase16.250.6419
4 Mapoly0014s0066 [KOG2271] Nuclear pore complex component (sc Nup85); [K14304] nuclear pore complex protein Nup85; [PF07575] Nup85 Nucleoporin; [PTHR13373] FROUNT PROTEIN-RELATED16.310.6643
5 Mapoly0132s0039 [KOG2780] Ribosome biogenesis protein RPF1, contains IMP4 domain; [PTHR22734:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain33.820.6496
6 Mapoly0102s0020 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [KOG0062] ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b; [K06158] ATP-binding cassette, sub-family F, member 3; [PF12848] ABC transporter; [PF00005] ABC transporter34.250.6567
7 Mapoly0031s0033 -38.570.6102
8 Mapoly0048s0058 [PTHR12821] BYSTIN; [KOG3871] Cell adhesion complex protein bystin; [PTHR12821:SF0] SUBFAMILY NOT NAMED; [PF05291] Bystin38.810.6479
9 Mapoly0158s0003 [PF13921] Myb-like DNA-binding domain39.550.6304
10 Mapoly0004s0034 [PTHR21738:SF0] SUBFAMILY NOT NAMED; [PTHR21738] UNCHARACTERIZED; [KOG3190] Uncharacterized conserved protein; [PF06102] Domain of unknown function (DUF947)44.740.6096
11 Mapoly0006s0254 [PTHR13026:SF0] SUBFAMILY NOT NAMED; [PTHR13026] NNP-1 PROTEIN (NOVEL NUCLEAR PROTEIN 1) (NOP52); [GO:0030688] preribosome, small subunit precursor; [PF05997] Nucleolar protein,Nop52; [GO:0006364] rRNA processing45.390.6422
12 Mapoly0125s0035 [PTHR23081] RNA POLYMERASE II CTD PHOSPHATASE; [PF00035] Double-stranded RNA binding motif; [PF03031] NLI interacting factor-like phosphatase; [GO:0005515] protein binding; [PTHR23081:SF1] RNA POLYMERASE II CTD PHOSPHATASE48.090.6437
13 Mapoly0032s0003 [PF05178] KRI1-like family; [KOG2409] KRR1-interacting protein involved in 40S ribosome biogenesis; [PTHR14490] ZINC FINGER, ZZ TYPE; [PF12936] KRI1-like family C-terminal48.640.6472
14 Mapoly0061s0018 [KOG2318] Uncharacterized conserved protein; [GO:0005634] nucleus; [PF08159] NUC153 domain; [PTHR12202] UNCHARACTERIZED50.750.6346
15 Mapoly0098s0023 [PTHR19378] GOLGIN- RELATED; [PF14932] HAUS augmin-like complex subunit 3; [GO:0051225] spindle assembly; [GO:0070652] HAUS complex; [PTHR19378:SF0] SUBFAMILY NOT NAMED50.830.6451
16 Mapoly0001s0131 [K00813] aspartate aminotransferase [EC:2.6.1.1]; [2.6.1.1] Aspartate transaminase.; [GO:0006520] cellular amino acid metabolic process; [PTHR11879:SF1] gb def: aspartate/aromatic aminotransferase fusobacterium nucleatum subsp. nucleatum at; [PTHR11879] ASPARTATE AMINOTRANSFERASE; [PF00155] Aminotransferase class I and II; [GO:0009058] biosynthetic process; [GO:0008483] transaminase activity; [GO:0030170] pyridoxal phosphate binding; [KOG1411] Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT251.960.5854
17 Mapoly0065s0047 [PF13837] Myb/SANT-like DNA-binding domain53.780.6393
18 Mapoly0982s0001 [PF03143] Elongation factor Tu C-terminal domain; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding54.060.5850
19 Mapoly0037s0016 [KOG2096] WD40 repeat protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat54.090.6201
20 Mapoly0024s0124 [GO:0005524] ATP binding; [GO:0003774] motor activity; [PTHR13140] MYOSIN; [GO:0005515] protein binding; [KOG0160] Myosin class V heavy chain; [PF00612] IQ calmodulin-binding motif; [PF00063] Myosin head (motor domain); [GO:0016459] myosin complex55.450.6346
21 Mapoly0047s0039 [PTHR31027] FAMILY NOT NAMED59.570.5841
22 Mapoly0020s0112 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family61.710.5646
23 Mapoly0061s0104 [KOG3064] RNA-binding nuclear protein (MAK16) containing a distinct C4 Zn-finger; [PTHR23405:SF4] MAINTENANCE OF KILLER 16 (MAK16) PROTEIN; [PF01778] Ribosomal L28e protein family; [PF04874] Mak16 protein C-terminal region; [PTHR23405] MAINTENANCE OF KILLER 16 (MAK16) PROTEIN-RELATED63.610.6355
24 Mapoly0030s0147 [GO:0005524] ATP binding; [PF01928] CYTH domain; [KOG3308] Uncharacterized protein of the uridine kinase family; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [PTHR10285] URIDINE KINASE68.930.5039
25 Mapoly0089s0014 [PTHR24072:SF73] SUBFAMILY NOT NAMED; [KOG1707] Predicted Ras related/Rac-GTP binding protein; [PF08355] EF hand associated; [GO:0007264] small GTPase mediated signal transduction; [PF08356] EF hand associated; [PTHR24072] RHO FAMILY GTPASE; [GO:0005622] intracellular; [GO:0005525] GTP binding; [PF08477] Miro-like protein73.720.6368
26 Mapoly0024s0107 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [K03350] anaphase-promoting complex subunit 3; [KOG1126] DNA-binding cell division cycle control protein; [PF13181] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF11] CELL DIVISION CYCLE 27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 373.970.6261
27 Mapoly0090s0076 [GO:0008565] protein transporter activity; [PF02889] Sec63 Brl domain; [PTHR24075:SF0] SUBFAMILY NOT NAMED; [K09540] translocation protein SEC63; [KOG0721] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [GO:0031204] posttranslational protein targeting to membrane, translocation; [PTHR24075] FAMILY NOT NAMED80.200.5918
28 Mapoly0057s0084 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45083.410.5431
29 Mapoly0145s0019 [K03353] anaphase-promoting complex subunit 6; [PF13414] TPR repeat; [KOG1173] Anaphase-promoting complex (APC), Cdc16 subunit; [PF13424] Tetratricopeptide repeat; [PTHR12558:SF9] CELL DIVISION CYCLE 16; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 385.590.6142
30 Mapoly0065s0046 [PTHR15327:SF0] SUBFAMILY NOT NAMED; [PTHR15327] MICROFIBRIL-ASSOCIATED PROTEIN; [KOG1425] Microfibrillar-associated protein MFAP1; [PF06991] Splicing factor, Prp19-binding domain; [K13110] microfibrillar-associated protein 188.950.6127
31 Mapoly0003s0293 [PF03168] Late embryogenesis abundant protein; [PTHR31852] FAMILY NOT NAMED90.420.5367
32 Mapoly0013s0040 [GO:0005524] ATP binding; [KOG0359] Chaperonin complex component, TCP-1 zeta subunit (CCT6); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family90.660.6188
33 Mapoly0025s0073 [PTHR17605] RIBOSOME BIOGENESIS PROTEIN BOP1 (BLOCK OF PROLIFERATION 1 PROTEIN); [GO:0005515] protein binding; [GO:0006364] rRNA processing; [KOG0650] WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis; [PF00400] WD domain, G-beta repeat; [PF08145] BOP1NT (NUC169) domain90.960.6161
34 Mapoly0004s0173 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED95.470.5812
35 Mapoly0015s0089 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [3.6.4.13] RNA helicase.; [K11594] ATP-dependent RNA helicase [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PTHR24031:SF9] HELICASE CONSERVED C-TERMINAL DOMAIN, PUTATIVE; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding97.710.6022
36 Mapoly0091s0001 [PTHR14190:SF7] SUBFAMILY NOT NAMED; [PF04129] Vps52 / Sac2 family; [KOG1961] Vacuolar sorting protein VPS52/suppressor of actin Sac2; [PTHR14190] SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 5299.680.5741
37 Mapoly0156s0015 [GO:0005524] ATP binding; [KOG0361] Chaperonin complex component, TCP-1 eta subunit (CCT7); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [PTHR11353:SF22] CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ETA SUBUNIT, TCPH; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding101.560.6074
38 Mapoly0146s0008 [GO:0008641] small protein activating enzyme activity; [GO:0005524] ATP binding; [PF09358] Ubiquitin-activating enzyme e1 C-terminal domain; [PF00899] ThiF family; [PF02134] Repeat in ubiquitin-activating (UBA) protein; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [KOG2012] Ubiquitin activating enzyme UBA1; [PF10585] Ubiquitin-activating enzyme active site; [GO:0006464] cellular protein modification process; [K03178] ubiquitin-activating enzyme E1 [EC:6.3.2.19]; [PTHR10953:SF4] UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 1 (UBIQUITIN-ACTIVATING ENZYME E1)103.570.5593
39 Mapoly0177s0007 [GO:0016020] membrane; [3.6.1.1] Inorganic diphosphatase.; [PF03030] Inorganic H+ pyrophosphatase; [GO:0004427] inorganic diphosphatase activity; [PTHR31998:SF0] SUBFAMILY NOT NAMED; [K01507] inorganic pyrophosphatase [EC:3.6.1.1]; [GO:0015992] proton transport; [GO:0009678] hydrogen-translocating pyrophosphatase activity; [PTHR31998] FAMILY NOT NAMED106.950.5822
40 Mapoly0108s0008 [PF00226] DnaJ domain; [KOG0713] Molecular chaperone (DnaJ superfamily); [PTHR24076] FAMILY NOT NAMED108.780.5332
41 Mapoly0095s0043 [KOG3043] Predicted hydrolase related to dienelactone hydrolase; [GO:0016787] hydrolase activity; [PTHR17630] DIENELACTONE HYDROLASE; [PF01738] Dienelactone hydrolase family109.860.4634
42 Mapoly0167s0009 [GO:0005524] ATP binding; [KOG0348] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031:SF89] ATP-INDEPENDENT RNA HELICASE; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF13959] Domain of unknown function (DUF4217)110.170.5884
43 Mapoly0006s0069 -112.960.5992
44 Mapoly0114s0007 [KOG0724] Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09522] DnaJ homolog subfamily C member 2113.890.5746
45 Mapoly0013s0077 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding115.900.5412
46 Mapoly0007s0138 [PF08492] SRP72 RNA-binding domain; [PF13371] Tetratricopeptide repeat; [GO:0048500] signal recognition particle; [KOG2376] Signal recognition particle, subunit Srp72; [GO:0008312] 7S RNA binding; [PTHR14094:SF9] SIGNAL RECOGNITION PARTICLE 72; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03108] signal recognition particle subunit SRP72; [PTHR14094] SIGNAL RECOGNITION PARTICLE 72119.690.6099
47 Mapoly0103s0023 [GO:0003723] RNA binding; [KOG1253] tRNA methyltransferase; [PTHR10631] N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE; [K00555] tRNA (guanine-N2-)-methyltransferase [EC:2.1.1.32]; [2.1.1.32] Transferred entry: 2.1.1.213, 2.1.1.214, 2.1.1.215 and 2.1.1.216.; [GO:0008033] tRNA processing; [PF02005] N2,N2-dimethylguanosine tRNA methyltransferase; [GO:0004809] tRNA (guanine-N2-)-methyltransferase activity120.580.5980
48 Mapoly0011s0125 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [KOG0100] Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily; [PF00012] Hsp70 protein121.190.5655
49 Mapoly0122s0020 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF07716] Basic region leucine zipper124.630.5720
50 Mapoly0004s0166 [PTHR22904:SF7] SGT-1-RELATED; [PF13414] TPR repeat; [PF00226] DnaJ domain; [PTHR22904] TPR REPEAT CONTAINING PROTEIN126.220.5107
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