Guide Gene

Gene ID
Mapoly0034s0103
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[4.2.1.-] Hydro-lyases.; [PF04387] Protein tyrosine phosphatase-like protein, PTPLA; [K10703] 3-hydroxy acyl-CoA dehydratase [EC:4.2.1.-]; [KOG3187] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg); [PTHR11035] PTPLA DOMAIN PROTEIN

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0034s0103 [4.2.1.-] Hydro-lyases.; [PF04387] Protein tyrosine phosphatase-like protein, PTPLA; [K10703] 3-hydroxy acyl-CoA dehydratase [EC:4.2.1.-]; [KOG3187] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg); [PTHR11035] PTPLA DOMAIN PROTEIN 0.00 1.0000
1 Mapoly0007s0072 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [GO:0006457] protein folding; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [K09569] FK506-binding protein 2 [EC:5.2.1.8]; [KOG0549] FKBP-type peptidyl-prolyl cis-trans isomerase2.650.9165
2 Mapoly0053s0096 -8.600.9047
3 Mapoly0050s0123 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase14.070.8438
4 Mapoly0001s0114 [PF03629] Domain of unknown function (DUF303); [PTHR31988] FAMILY NOT NAMED16.430.8730
5 Mapoly0013s0139 [GO:0005840] ribosome; [KOG1754] 40S ribosomal protein S15/S22; [PTHR11758] 30S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [K02957] small subunit ribosomal protein S15Ae; [PF00410] Ribosomal protein S8; [GO:0006412] translation16.520.8982
6 Mapoly0008s0274 [GO:0005783] endoplasmic reticulum; [PTHR20994] UNCHARACTERIZED; [GO:0016021] integral to membrane; [GO:0072546] ER membrane protein complex; [KOG4455] Uncharacterized conserved protein; [PF07019] Rab5-interacting protein (Rab5ip); [PTHR20994:SF0] SUBFAMILY NOT NAMED17.490.8688
7 Mapoly0063s0011 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [K02983] small subunit ribosomal protein S30e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion19.600.8963
8 Mapoly0036s0018 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [K02960] small subunit ribosomal protein S16e; [GO:0006412] translation21.790.8891
9 Mapoly0127s0012 [PTHR13557:SF1] gb def: hypothetical protein xp_167260 [homo sapiens]; [PTHR13557] UNCHARACTERIZED22.250.8831
10 Mapoly0014s0052 -24.150.8505
11 Mapoly0007s0048 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain25.220.8842
12 Mapoly0069s0078 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion25.400.8790
13 Mapoly0033s0066 [KOG2742] Predicted oxidoreductase; [GO:0016491] oxidoreductase activity; [PF01408] Oxidoreductase family, NAD-binding Rossmann fold; [PTHR22604] OXIDOREDUCTASES26.440.7735
14 Mapoly0131s0009 [GO:0005840] ribosome; [PTHR10732:SF0] 40S RIBOSOMAL PROTEIN S17; [KOG0187] 40S ribosomal protein S17; [PF00833] Ribosomal S17; [GO:0003735] structural constituent of ribosome; [PTHR10732] 40S RIBOSOMAL PROTEIN S17; [GO:0005622] intracellular; [GO:0006412] translation; [K02962] small subunit ribosomal protein S17e26.590.8838
15 Mapoly0003s0161 [GO:0005840] ribosome; [PTHR11843] 40S RIBOSOMAL PROTEIN S12; [GO:0003735] structural constituent of ribosome; [KOG3406] 40S ribosomal protein S12; [GO:0005622] intracellular; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [GO:0006412] translation; [K02951] small subunit ribosomal protein S12e28.710.8834
16 Mapoly0158s0031 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [K02969] small subunit ribosomal protein S20e; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e31.290.8815
17 Mapoly0064s0119 [GO:0005840] ribosome; [GO:0005515] protein binding; [K02927] large subunit ribosomal protein L40e; [GO:0003735] structural constituent of ribosome; [KOG0003] Ubiquitin/60s ribosomal protein L40 fusion; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [GO:0006412] translation; [PF01020] Ribosomal L40e family31.300.8817
18 Mapoly0007s0275 [GO:0006801] superoxide metabolic process; [PF00080] Copper/zinc superoxide dismutase (SODC); [GO:0055114] oxidation-reduction process; [K04565] Cu/Zn superoxide dismutase [EC:1.15.1.1]; [PTHR10003] SUPEROXIDE DISMUTASE [CU-ZN]-RELATED; [KOG0441] Cu2+/Zn2+ superoxide dismutase SOD1; [GO:0046872] metal ion binding; [1.15.1.1] Superoxide dismutase.33.000.8691
19 Mapoly0001s0492 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0880] Peptidyl-prolyl cis-trans isomerase35.720.8726
20 Mapoly0054s0044 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L1336.000.8811
21 Mapoly0026s0131 [GO:0005840] ribosome; [PF01907] Ribosomal protein L37e; [K02922] large subunit ribosomal protein L37e; [PTHR10768] 60S RIBOSOMAL PROTEIN L37; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3475] 60S ribosomal protein L37; [GO:0006412] translation37.300.8810
22 Mapoly0043s0018 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein38.340.8809
23 Mapoly0124s0041 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation; [K02964] small subunit ribosomal protein S18e39.600.8783
24 Mapoly0026s0093 [GO:0009116] nucleoside metabolic process; [K01244] 5'-methylthioadenosine nucleosidase [EC:3.2.2.16]; [PF01048] Phosphorylase superfamily; [PTHR21234] PURINE NUCLEOSIDE PHOSPHORYLASE; [3.2.2.16] Methylthioadenosine nucleosidase.; [GO:0003824] catalytic activity42.040.8489
25 Mapoly0012s0181 [GO:0005840] ribosome; [PTHR12010] 40S RIBOSOMAL PROTEIN S29; [KOG3506] 40S ribosomal protein S29; [K02980] small subunit ribosomal protein S29e; [PF00253] Ribosomal protein S14p/S29e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation43.240.8780
26 Mapoly0003s0256 [GO:0005840] ribosome; [K02912] large subunit ribosomal protein L32e; [KOG0878] 60S ribosomal protein L32; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N; [PF01655] Ribosomal protein L3244.900.8773
27 Mapoly0016s0091 [GO:0005840] ribosome; [K02949] small subunit ribosomal protein S11e; [KOG1728] 40S ribosomal protein S11; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER44.940.8761
28 Mapoly0055s0071 [GO:0005840] ribosome; [PF01294] Ribosomal protein L13e; [GO:0003735] structural constituent of ribosome; [PTHR11722] 60S RIBOSOMAL PROTEIN L13; [GO:0005622] intracellular; [PTHR11722:SF0] SUBFAMILY NOT NAMED; [K02873] large subunit ribosomal protein L13e; [KOG3295] 60S Ribosomal protein L13; [GO:0006412] translation45.720.8772
29 Mapoly0038s0097 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG0397] 60S ribosomal protein L11; [PF00281] Ribosomal protein L5; [GO:0006412] translation; [PTHR11994] 60S RIBOSOMAL PROTEIN L11-RELATED; [PF00673] ribosomal L5P family C-terminus46.050.8759
30 Mapoly0039s0054 [K00130] betaine-aldehyde dehydrogenase [EC:1.2.1.8]; [GO:0055114] oxidation-reduction process; [1.2.1.8] Betaine-aldehyde dehydrogenase.; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [KOG2450] Aldehyde dehydrogenase; [PF00171] Aldehyde dehydrogenase family46.480.6964
31 Mapoly0036s0060 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein47.330.8672
32 Mapoly0059s0023 [PTHR23365] POLY-A BINDING PROTEIN 2; [KOG4208] Nucleolar RNA-binding protein NIFK; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)48.580.8639
33 Mapoly0002s0184 [GO:0005840] ribosome; [PTHR10544:SF0] 60S RIBOSOMAL PROTEIN L28; [KOG3412] 60S ribosomal protein L28; [PTHR10544] 60S RIBOSOMAL PROTEIN L28; [GO:0003735] structural constituent of ribosome; [K02903] large subunit ribosomal protein L28e; [GO:0005622] intracellular; [PF01778] Ribosomal L28e protein family; [GO:0006412] translation49.190.8752
34 Mapoly0109s0030 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis50.410.7744
35 Mapoly0086s0038 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation50.750.8752
36 Mapoly0052s0059 [GO:0005801] cis-Golgi network; [PF04099] Sybindin-like family; [KOG3368] Transport protein particle (TRAPP) complex subunit; [PTHR23249] SYNBINDIN; [GO:0006888] ER to Golgi vesicle-mediated transport52.650.8593
37 Mapoly0065s0019 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [K02905] large subunit ribosomal protein L29e; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR12884] 60S RIBOSOMAL PROTEIN L29; [PF01779] Ribosomal L29e protein family52.990.8741
38 Mapoly0002s0129 [GO:0008565] protein transporter activity; [PTHR11753] CLATHRIN COAT ASSEMBLY PROTEIN; [KOG0934] Clathrin adaptor complex, small subunit; [GO:0015031] protein transport; [PTHR11753:SF5] CLATHRIN ASSEMBLY PROTEIN AP19; [PF01217] Clathrin adaptor complex small chain54.390.8316
39 Mapoly0151s0039 [PTHR13345:SF2] NUT2; [KOG3046] Transcription factor, subunit of SRB subcomplex of RNA polymerase II; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [PF09748] Transcription factor subunit Med10 of Mediator complex; [PTHR13345] NUT2 AND UXT54.410.7145
40 Mapoly0058s0078 [2.8.1.2] 3-mercaptopyruvate sulfurtransferase.; [PTHR11364:SF0] THIOSULFATE SULFURTRANSFERASE; [KOG1529] Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase; [PF00581] Rhodanese-like domain; [K01011] thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]; [PTHR11364] THIOSULFATE SULFERTANSFERASE; [2.8.1.1] Thiosulfate sulfurtransferase.54.440.8079
41 Mapoly0014s0159 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PTHR10496] 40S RIBOSOMAL PROTEIN S24; [PF01282] Ribosomal protein S24e; [GO:0005622] intracellular; [K02974] small subunit ribosomal protein S24e; [GO:0006412] translation; [KOG3424] 40S ribosomal protein S2454.770.8737
42 Mapoly0004s0053 -55.520.8555
43 Mapoly0073s0056 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG3252] Uncharacterized conserved protein; [PTHR13022] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family55.620.8735
44 Mapoly0086s0019 -56.230.8512
45 Mapoly0006s0174 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein56.250.8726
46 Mapoly0135s0041 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [KOG1762] 60s acidic ribosomal protein P1; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02942] large subunit ribosomal protein LP1; [PF00428] 60s Acidic ribosomal protein56.390.8719
47 Mapoly0179s0026 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process56.680.8460
48 Mapoly0005s0013 [PTHR11043:SF0] SUBFAMILY NOT NAMED; [PTHR11043] ZETA-COAT PROTEIN; [KOG3343] Vesicle coat complex COPI, zeta subunit; [PF01217] Clathrin adaptor complex small chain57.360.8340
49 Mapoly0002s0182 [GO:0005840] ribosome; [PTHR19970] RIBOSOMAL PROTEIN L39E; [PF00832] Ribosomal L39 protein; [K02924] large subunit ribosomal protein L39e; [GO:0003735] structural constituent of ribosome; [KOG0002] 60s ribosomal protein L39; [GO:0005622] intracellular; [GO:0006412] translation58.660.8718
50 Mapoly0073s0035 [PTHR12828:SF3] PROTEASOME MATURATION PROTEIN (UMP1); [K11599] proteasome maturation protein; [PF05348] Proteasome maturation factor UMP1; [KOG3061] Proteasome maturation factor; [PTHR12828] PROTEASOME MATURATION PROTEIN (UMP1)59.000.8480
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