Guide Gene

Gene ID
Mapoly0027s0009
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR23309] 3-HYDROXYACYL-COA DEHYROGENASE; [GO:0055114] oxidation-reduction process; [PF00378] Enoyl-CoA hydratase/isomerase family; [GO:0006631] fatty acid metabolic process; [KOG1683] Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00725] 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; [GO:0003824] catalytic activity; [PF02737] 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; [GO:0003857] 3-hydroxyacyl-CoA dehydrogenase activity

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0027s0009 [PTHR23309] 3-HYDROXYACYL-COA DEHYROGENASE; [GO:0055114] oxidation-reduction process; [PF00378] Enoyl-CoA hydratase/isomerase family; [GO:0006631] fatty acid metabolic process; [KOG1683] Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00725] 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; [GO:0003824] catalytic activity; [PF02737] 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; [GO:0003857] 3-hydroxyacyl-CoA dehydrogenase activity 0.00 1.0000
1 Mapoly0037s0136 [4.1.3.27] Anthranilate synthase.; [PTHR11922] GMP SYNTHASE-RELATED; [K01658] anthranilate synthase component II [EC:4.1.3.27]; [KOG0026] Anthranilate synthase, beta chain; [PF00117] Glutamine amidotransferase class-I; [PTHR11922:SF7] SUBFAMILY NOT NAMED1.000.8682
2 Mapoly0019s0126 [PTHR10994] RETICULON; [PF03407] Nucleotide-diphospho-sugar transferase2.000.7510
3 Mapoly0057s0049 [K10525] allene oxide cyclase [EC:5.3.99.6]; [PTHR31843] FAMILY NOT NAMED; [PF06351] Allene oxide cyclase; [GO:0009507] chloroplast; [GO:0016853] isomerase activity; [5.3.99.6] Allene-oxide cyclase.2.830.7818
4 Mapoly0113s0061 [KOG4175] Tryptophan synthase alpha chain; [4.2.1.20] Tryptophan synthase.; [PF00290] Tryptophan synthase alpha chain; [K01695] tryptophan synthase alpha chain [EC:4.2.1.20]; [GO:0004834] tryptophan synthase activity; [GO:0006568] tryptophan metabolic process; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE3.870.7554
5 Mapoly0001s0318 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis4.120.7031
6 Mapoly0030s0147 [GO:0005524] ATP binding; [PF01928] CYTH domain; [KOG3308] Uncharacterized protein of the uridine kinase family; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [PTHR10285] URIDINE KINASE4.360.7012
7 Mapoly0093s0083 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED4.470.7423
8 Mapoly0084s0014 [KOG0253] Synaptic vesicle transporter SV2 (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PTHR24064] FAMILY NOT NAMED; [GO:0022857] transmembrane transporter activity4.690.6923
9 Mapoly0005s0170 [GO:0016020] membrane; [PF01554] MatE; [GO:0015238] drug transmembrane transporter activity; [GO:0015297] antiporter activity; [GO:0055085] transmembrane transport; [PTHR11206] MULTIDRUG RESISTANCE PROTEIN; [KOG1347] Uncharacterized membrane protein, predicted efflux pump; [GO:0006855] drug transmembrane transport7.350.7397
10 Mapoly0039s0036 [KOG1303] Amino acid transporters; [PF01490] Transmembrane amino acid transporter protein; [PTHR22950] AMINO ACID TRANSPORTER8.370.7109
11 Mapoly0080s0072 [GO:0004471] malate dehydrogenase (decarboxylating) activity; [PF00390] Malic enzyme, N-terminal domain; [GO:0055114] oxidation-reduction process; [PTHR23406] MALIC ENZYME-RELATED; [1.1.1.39] Malate dehydrogenase (decarboxylating).; [K00028] malate dehydrogenase (decarboxylating) [EC:1.1.1.39]; [PF03949] Malic enzyme, NAD binding domain; [KOG1257] NADP+-dependent malic enzyme; [GO:0051287] NAD binding8.490.7311
12 Mapoly0117s0054 [PF03018] Dirigent-like protein8.770.7213
13 Mapoly0152s0018 [PF00378] Enoyl-CoA hydratase/isomerase family; [KOG1680] Enoyl-CoA hydratase; [GO:0008152] metabolic process; [K01692] enoyl-CoA hydratase [EC:4.2.1.17]; [GO:0003824] catalytic activity; [PTHR11941] ENOYL-COA HYDRATASE-RELATED; [4.2.1.17] Enoyl-CoA hydratase.9.540.7134
14 Mapoly0106s0023 [KOG0513] Ca2+-independent phospholipase A2; [PF01734] Patatin-like phospholipase; [PTHR32176] FAMILY NOT NAMED; [GO:0006629] lipid metabolic process10.200.7321
15 Mapoly0182s0019 [KOG4431] Uncharacterized protein, induced by hypoxia; [PF04588] Hypoxia induced protein conserved region10.250.6963
16 Mapoly0007s0052 [PTHR21085:SF2] gb def: Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyas; [4.2.3.5] Chorismate synthase.; [PTHR21085] CHORISMATE SYNTHASE; [GO:0009073] aromatic amino acid family biosynthetic process; [GO:0004107] chorismate synthase activity; [PF01264] Chorismate synthase; [KOG4492] Chorismate synthase; [K01736] chorismate synthase [EC:4.2.3.5]11.310.7064
17 Mapoly0049s0079 [PTHR15323:SF6] SUBFAMILY NOT NAMED; [KOG2983] Uncharacterized conserved protein; [PTHR15323] D123 PROTEIN; [PF07065] D12311.620.6656
18 Mapoly0005s0102 [PF00501] AMP-binding enzyme; [KOG1176] Acyl-CoA synthetase; [K10526] OPC-8:0 CoA ligase 1 [EC:6.2.1.-]; [6.2.1.-] Acid--thiol ligases.; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED11.830.7371
19 Mapoly0034s0104 [K00800] 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]; [2.5.1.19] 3-phosphoshikimate 1-carboxyvinyltransferase.; [KOG0692] Pentafunctional AROM protein; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR21090] AROM/DEHYDROQUINATE SYNTHASE; [PF00275] EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)12.000.7185
20 Mapoly0033s0061 [K09587] cytochrome P450, family 90, subfamily B, polypeptide 1 (steroid 22-alpha-hydroxylase) [EC:1.14.13.-]; [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [1.14.13.-] With NADH or NADPH as one donor, and incorporation of one atom of oxygen.; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P450; [PTHR24286] FAMILY NOT NAMED14.490.7086
21 Mapoly0248s0004 [GO:0016020] membrane; [PF01554] MatE; [GO:0015238] drug transmembrane transporter activity; [GO:0015297] antiporter activity; [GO:0055085] transmembrane transport; [PTHR11206] MULTIDRUG RESISTANCE PROTEIN; [KOG1347] Uncharacterized membrane protein, predicted efflux pump; [GO:0006855] drug transmembrane transport14.490.6611
22 Mapoly0148s0026 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K00703] starch synthase [EC:2.4.1.21]; [PF08323] Starch synthase catalytic domain; [PTHR12526] GLYCOSYLTRANSFERASE; [2.4.1.21] Starch synthase.14.830.7251
23 Mapoly0255s0001 [PF03318] Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX215.000.6836
24 Mapoly0103s0025 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED16.970.6603
25 Mapoly0026s0148 [GO:0055114] oxidation-reduction process; [GO:0016702] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; [PTHR11771] LIPOXYGENASE; [GO:0046872] metal ion binding; [PF00305] Lipoxygenase17.030.6615
26 Mapoly0080s0092 -17.320.6994
27 Mapoly0121s0018 [PF12142] Polyphenol oxidase middle domain; [PF00264] Common central domain of tyrosinase; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219)17.660.6685
28 Mapoly0031s0116 [GO:0006571] tyrosine biosynthetic process; [GO:0008977] prephenate dehydrogenase activity; [GO:0055114] oxidation-reduction process; [PTHR11811:SF26] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [GO:0004665] prephenate dehydrogenase (NADP+) activity; [PF02153] Prephenate dehydrogenase; [PTHR11811] 6-PHOSPHOGLUCONATE DEHYDROGENASE19.180.6879
29 Mapoly0013s0004 [KOG2511] Nicotinic acid phosphoribosyltransferase; [2.4.2.11] Transferred entry: 6.3.4.21.; [K00763] nicotinate phosphoribosyltransferase [EC:2.4.2.11]; [PTHR11098] NICOTINATE PHOSPHORIBOSYLTRANSFERASE; [PTHR11098:SF1] NICOTINATE PHOSPHORIBOSYLTRANSFERASE; [PF04095] Nicotinate phosphoribosyltransferase (NAPRTase) family19.440.6373
30 Mapoly0092s0080 [GO:0008168] methyltransferase activity; [PF03492] SAM dependent carboxyl methyltransferase; [PTHR31009] S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN20.710.6595
31 Mapoly0175s0006 [GO:0016042] lipid catabolic process; [PTHR21493:SF16] SUBFAMILY NOT NAMED; [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF01764] Lipase (class 3); [KOG2088] Predicted lipase/calmodulin-binding heat-shock protein; [PF03893] Lipase 3 N-terminal region; [GO:0006629] lipid metabolic process21.170.6655
32 Mapoly0006s0022 [PTHR31414] FAMILY NOT NAMED22.490.6222
33 Mapoly0007s0119 [GO:0005777] peroxisome; [GO:0055114] oxidation-reduction process; [1.3.3.6] Acyl-CoA oxidase.; [GO:0006635] fatty acid beta-oxidation; [GO:0003997] acyl-CoA oxidase activity; [K00232] acyl-CoA oxidase [EC:1.3.3.6]; [PTHR10909] ELECTRON TRANSPORT OXIDOREDUCTASE; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [PF01756] Acyl-CoA oxidase; [KOG0135] Pristanoyl-CoA/acyl-CoA oxidase; [PF02770] Acyl-CoA dehydrogenase, middle domain; [PF00441] Acyl-CoA dehydrogenase, C-terminal domain; [GO:0003995] acyl-CoA dehydrogenase activity22.850.7024
34 Mapoly0007s0174 [KOG1591] Prolyl 4-hydroxylase alpha subunit; [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PF13640] 2OG-Fe(II) oxygenase superfamily; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2]23.020.6061
35 Mapoly0080s0089 -24.490.6442
36 Mapoly0191s0014 [GO:0055114] oxidation-reduction process; [GO:0005515] protein binding; [GO:0016702] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; [PTHR11771] LIPOXYGENASE; [PF01477] PLAT/LH2 domain; [GO:0046872] metal ion binding; [PF00305] Lipoxygenase24.980.6858
37 Mapoly0001s0049 [PF12638] Staygreen protein; [PTHR31750] FAMILY NOT NAMED25.460.5594
38 Mapoly0014s0007 [PF12695] Alpha/beta hydrolase family25.690.6276
39 Mapoly0181s0012 [GO:0000287] magnesium ion binding; [PTHR14217:SF1] INOSITOL 1,3,4-TRIPHOSPHATE 5/6 KINASE; [GO:0005524] ATP binding; [2.7.1.134] Inositol-tetrakisphosphate 1-kinase.; [PTHR14217] FAMILY NOT NAMED; [2.7.1.159] Inositol-1,3,4-trisphosphate 5/6-kinase.; [GO:0052725] inositol-1,3,4-trisphosphate 6-kinase activity; [GO:0005622] intracellular; [GO:0047325] inositol tetrakisphosphate 1-kinase activity; [GO:0032957] inositol trisphosphate metabolic process; [PF05770] Inositol 1, 3, 4-trisphosphate 5/6-kinase; [GO:0052726] inositol-1,3,4-trisphosphate 5-kinase activity; [K00913] inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [EC:2.7.1.159 2.7.1.134]27.110.6580
40 Mapoly0014s0065 [PTHR13593] UNCHARACTERIZED28.280.6126
41 Mapoly0191s0012 [PTHR10358] ENDOSULFINE; [PF04667] cAMP-regulated phosphoprotein/endosulfine conserved region30.250.5939
42 Mapoly0081s0007 -31.610.6553
43 Mapoly0120s0005 [GO:0000139] Golgi membrane; [PTHR10231:SF3] NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN; [GO:0016021] integral to membrane; [PTHR10231] NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER; [GO:0005351] sugar:hydrogen symporter activity; [GO:0008643] carbohydrate transport; [KOG2234] Predicted UDP-galactose transporter; [PF04142] Nucleotide-sugar transporter32.030.6057
44 Mapoly0052s0033 [GO:0009116] nucleoside metabolic process; [PF13793] N-terminal domain of ribose phosphate pyrophosphokinase; [KOG1448] Ribose-phosphate pyrophosphokinase; [PTHR10210] RIBOSE-PHOSPHATE PYROPHOSPHOKINASE; [PF00156] Phosphoribosyl transferase domain32.330.5452
45 Mapoly0027s0136 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity32.470.6607
46 Mapoly0067s0030 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [PTHR24063:SF148] PUTATIVE UNCHARACTERIZED PROTEIN; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED35.500.5474
47 Mapoly0112s0020 -36.060.5804
48 Mapoly0124s0060 -36.950.6527
49 Mapoly0001s0327 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [2.3.1.12] Dihydrolipoyllysine-residue acetyltransferase.; [PF00364] Biotin-requiring enzyme; [KOG0557] Dihydrolipoamide acetyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [K00627] pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain38.500.6542
50 Mapoly0010s0047 [GO:0045454] cell redox homeostasis; [PF13848] Thioredoxin-like domain; [KOG0190] Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit); [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE40.400.5324
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