Guide Gene

Gene ID
Mapoly0011s0029
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0011s0029 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease 0.00 1.0000
1 Mapoly0001s0147 [PF04535] Domain of unknown function (DUF588); [PTHR32021] FAMILY NOT NAMED1.000.7469
2 Mapoly0004s0153 [KOG2913] Predicted membrane protein; [PTHR16201] FAMILY NOT NAMED; [PF04193] PQ loop repeat3.870.7183
3 Mapoly0016s0180 [PTHR32419] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG2903] Predicted glutathione S-transferase; [PF13410] Glutathione S-transferase, C-terminal domain; [K07393] putative glutathione S-transferase; [PF13409] Glutathione S-transferase, N-terminal domain4.000.7216
4 Mapoly0084s0046 -10.250.7023
5 Mapoly0020s0114 [GO:0003677] DNA binding; [PTHR10634] AN1-TYPE ZINC FINGER PROTEIN; [PF01428] AN1-like Zinc finger; [KOG3173] Predicted Zn-finger protein; [GO:0008270] zinc ion binding; [PF01754] A20-like zinc finger10.950.6999
6 Mapoly0050s0025 [GO:0047746] chlorophyllase activity; [3.1.1.14] Chlorophyllase.; [K08099] chlorophyllase [EC:3.1.1.14]; [PF07224] Chlorophyllase; [GO:0015996] chlorophyll catabolic process11.830.7059
7 Mapoly0080s0018 -12.330.7142
8 Mapoly0042s0036 [KOG3272] Predicted coiled-coil protein; [PTHR13049] DUF814-RELATED; [PF05670] Domain of unknown function (DUF814)14.460.6849
9 Mapoly0059s0066 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [KOG2793] Putative N2,N2-dimethylguanosine tRNA methyltransferase15.100.6311
10 Mapoly0121s0045 [PTHR10052] 60S RIBOSOMAL PROTEIN L18A17.230.6968
11 Mapoly0061s0138 [GO:0009055] electron carrier activity; [K03521] electron transfer flavoprotein beta subunit; [KOG3180] Electron transfer flavoprotein, beta subunit; [PF01012] Electron transfer flavoprotein domain; [PTHR21294] ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT18.490.7051
12 Mapoly0045s0019 [PTHR10891] EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding; [KOG0027] Calmodulin and related proteins (EF-Hand superfamily); [PF13202] EF hand21.450.6553
13 Mapoly0014s0123 -30.500.6858
14 Mapoly0206s0011 [GO:0055114] oxidation-reduction process; [K00134] glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]; [PF02800] Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; [PF00044] Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; [GO:0016620] oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; [1.2.1.12] Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating).; [KOG0657] Glyceraldehyde 3-phosphate dehydrogenase; [PTHR10836] GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE31.220.6773
15 Mapoly0032s0162 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [KOG0023] Alcohol dehydrogenase, class V; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED; [PTHR11695:SF261] ALCOHOL DEHYDROGENASE (ZN CONTAINING) (ADH-6)31.620.5799
16 Mapoly0111s0030 -32.400.6750
17 Mapoly0077s0027 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0092] GTPase Rab5/YPT51 and related small G protein superfamily GTPases; [PF00071] Ras family; [GO:0005525] GTP binding32.620.6595
18 Mapoly0002s0342 [PF07145] Ataxin-2 C-terminal region32.860.6261
19 Mapoly0009s0213 [PF03168] Late embryogenesis abundant protein; [PTHR31852] FAMILY NOT NAMED35.000.6466
20 Mapoly0088s0088 [PF02672] CP12 domain35.920.6712
21 Mapoly0135s0031 [PTHR13078:SF5] SUBFAMILY NOT NAMED; [PTHR13078] FAMILY NOT NAMED; [PF01575] MaoC like domain; [PF13452] N-terminal half of MaoC dehydratase; [KOG1206] Peroxisomal multifunctional beta-oxidation protein and related enzymes36.880.6300
22 Mapoly0113s0027 -37.000.6326
23 Mapoly0073s0013 [PF07719] Tetratricopeptide repeat; [GO:0016567] protein ubiquitination; [PF13414] TPR repeat; [GO:0004842] ubiquitin-protein ligase activity; [PF04564] U-box domain; [PTHR22904] TPR REPEAT CONTAINING PROTEIN40.000.6669
24 Mapoly0032s0159 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [KOG0023] Alcohol dehydrogenase, class V; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED; [PTHR11695:SF261] ALCOHOL DEHYDROGENASE (ZN CONTAINING) (ADH-6)41.670.6254
25 Mapoly0023s0018 -43.500.6297
26 Mapoly0037s0106 [PTHR10030] ALPHA-L-FUCOSIDASE; [PF00754] F5/8 type C domain; [GO:0004560] alpha-L-fucosidase activity; [PF01120] Alpha-L-fucosidase; [GO:0005975] carbohydrate metabolic process; [GO:0007155] cell adhesion44.090.6606
27 Mapoly0080s0067 [PTHR19332] PEROXISOMAL MEMBRANE PROTEIN PEX1348.370.6266
28 Mapoly0032s0088 [PF13450] NAD(P)-binding Rossmann-like domain; [GO:0055114] oxidation-reduction process; [PTHR15944] FAMILY NOT NAMED; [GO:0016670] oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor; [1.8.3.5] Prenylcysteine oxidase.; [PF07156] Prenylcysteine lyase; [GO:0030328] prenylcysteine catabolic process; [K05906] prenylcysteine oxidase [EC:1.8.3.5]48.760.6415
29 Mapoly0036s0005 [GO:0015035] protein disulfide oxidoreductase activity; [PTHR10168] GLUTAREDOXIN; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [PTHR10168:SF44] GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 148.930.5867
30 Mapoly0080s0019 [PF09493] Tryptophan-rich protein (DUF2389)49.840.6150
31 Mapoly0005s0092 [PTHR32133] FAMILY NOT NAMED; [PF08268] F-box associated domain; [GO:0005515] protein binding; [PF00646] F-box domain50.910.5912
32 Mapoly0216s0003 [GO:0016020] membrane; [PF01569] PAP2 superfamily; [PTHR10165] LIPID PHOSPHATE PHOSPHATASE; [GO:0003824] catalytic activity; [KOG3030] Lipid phosphate phosphatase and related enzymes of the PAP2 family50.990.6584
33 Mapoly0042s0011 [KOG0372] Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related; [PTHR11668:SF22] SERINE/THREONINE PROTEIN PHOSPHATASE 4 CATALYTIC SUBUNIT (PP4C) (PROTEIN PHOSPHATASE X); [PTHR11668] SERINE/THREONINE PROTEIN PHOSPHATASE; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [K01090] protein phosphatase [EC:3.1.3.16]; [3.1.3.16] Phosphoprotein phosphatase.51.500.6269
34 Mapoly0078s0002 [KOG1417] Homogentisate 1,2-dioxygenase; [GO:0055114] oxidation-reduction process; [PTHR11056:SF0] HOMOGENTISATE 1,2-DIOXYGENASE; [PTHR11056] HOMOGENTISATE 1,2-DIOXYGENASE; [GO:0006559] L-phenylalanine catabolic process; [PF04209] homogentisate 1,2-dioxygenase; [GO:0004411] homogentisate 1,2-dioxygenase activity; [GO:0006570] tyrosine metabolic process52.380.6447
35 Mapoly0036s0059 -53.440.6579
36 Mapoly0007s0109 -54.110.6784
37 Mapoly0034s0036 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22766:SF29] SUBFAMILY NOT NAMED54.770.6536
38 Mapoly0140s0025 [GO:0004356] glutamate-ammonia ligase activity; [GO:0006542] glutamine biosynthetic process; [GO:0006807] nitrogen compound metabolic process; [PTHR20852] GLUTAMINE SYNTHETASE; [PF03951] Glutamine synthetase, beta-Grasp domain; [PF00120] Glutamine synthetase, catalytic domain55.780.6610
39 Mapoly0140s0023 [GO:0033179] proton-transporting V-type ATPase, V0 domain; [3.6.3.14] H(+)-transporting two-sector ATPase.; [PF01992] ATP synthase (C/AC39) subunit; [KOG2957] Vacuolar H+-ATPase V0 sector, subunit d; [GO:0015078] hydrogen ion transmembrane transporter activity; [PTHR11028] VACUOLAR ATP SYNTHASE SUBUNIT AC39; [GO:0015991] ATP hydrolysis coupled proton transport; [K02146] V-type H+-transporting ATPase subunit AC39 [EC:3.6.3.14]58.660.5884
40 Mapoly0122s0010 [GO:0019295] coenzyme M biosynthetic process; [PF02679] (2R)-phospho-3-sulfolactate synthase (ComA); [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN59.900.6305
41 Mapoly0030s0115 [PF00241] Cofilin/tropomyosin-type actin-binding protein; [GO:0015629] actin cytoskeleton; [GO:0030042] actin filament depolymerization; [KOG1735] Actin depolymerizing factor; [GO:0005622] intracellular; [GO:0003779] actin binding; [PTHR11913] COFILIN-RELATED60.850.5620
42 Mapoly0024s0071 -64.060.6329
43 Mapoly0056s0055 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [1.1.2.4] D-lactate dehydrogenase (cytochrome).; [PF02913] FAD linked oxidases, C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0003824] catalytic activity; [K00102] D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]; [PTHR11748] D-LACTATE DEHYDROGENASE; [KOG1231] Proteins containing the FAD binding domain; [PF01565] FAD binding domain67.310.5505
44 Mapoly0124s0026 [GO:0006744] ubiquinone biosynthetic process; [KOG3244] Protein involved in ubiquinone biosynthesis; [PTHR12922] UBIQUINONE BIOSYNTHESIS PROTEIN; [PF05019] Coenzyme Q (ubiquinone) biosynthesis protein Coq467.750.6376
45 Mapoly0025s0125 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily68.930.6563
46 Mapoly0012s0149 [PTHR19842] G BETA-LIKE PROTEIN GBL; [GO:0005515] protein binding; [KOG0315] G-protein beta subunit-like protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat69.910.4660
47 Mapoly0073s0011 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED71.220.6245
48 Mapoly0007s0062 [PTHR31142] FAMILY NOT NAMED; [PF06454] Protein of unknown function (DUF1084)71.950.6365
49 Mapoly0015s0160 [PF01490] Transmembrane amino acid transporter protein; [KOG1305] Amino acid transporter protein; [PTHR22950] AMINO ACID TRANSPORTER72.730.5771
50 Mapoly0011s0084 [PTHR13292] UNCHARACTERIZED; [KOG4493] Uncharacterized conserved protein; [PF07855] Protein of unknown function (DUF1649); [PTHR13292:SF0] SUBFAMILY NOT NAMED72.970.6085
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