Guide Gene

Gene ID
Mapoly0007s0244
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR23115] TRANSLATION FACTOR

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0007s0244 [PTHR23115] TRANSLATION FACTOR 0.00 1.0000
1 Mapoly0016s0098 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF00170] bZIP transcription factor5.570.8133
2 Mapoly0007s0115 [KOG0959] N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily; [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16)16.550.8038
3 Mapoly0090s0080 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family16.970.7899
4 Mapoly0007s0092 [GO:0003677] DNA binding; [K10848] DNA excision repair protein ERCC-4 [EC:3.1.-.-]; [PTHR10150] DNA REPAIR ENDONUCLEASE XPF; [GO:0004518] nuclease activity; [3.1.-.-] Acting on ester bonds.; [PF02732] ERCC4 domain18.650.7971
5 Mapoly0086s0009 [GO:0070461] SAGA-type complex; [PTHR21277] FAMILY NOT NAMED; [PF12767] Transcriptional regulator of RNA polII, SAGA, subunit20.620.7873
6 Mapoly0114s0028 -24.080.7751
7 Mapoly0054s0112 [PTHR13620] 3-5 EXONUCLEASE; [PF00035] Double-stranded RNA binding motif; [GO:0008408] 3'-5' exonuclease activity; [PTHR13620:SF2] gb def: cg6744 gene product [drosophila melanogaster]; [PF01612] 3'-5' exonuclease; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [KOG2207] Predicted 3'-5' exonuclease26.270.7598
8 Mapoly0042s0046 [PF09496] Cenp-O kinetochore centromere component; [GO:0034508] centromere complex assembly; [PTHR14582] FAMILY NOT NAMED; [K11507] centromere protein O; [GO:0000776] kinetochore33.140.7686
9 Mapoly0009s0169 [GO:0006355] regulation of transcription, DNA-dependent; [PF04494] WD40 associated region in TFIID subunit; [GO:0005515] protein binding; [K03130] transcription initiation factor TFIID subunit 5; [GO:0005634] nucleus; [PTHR19879] TRANSCRIPTION INITIATION FACTOR TFIID; [KOG0263] Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA); [PTHR19879:SF1] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat35.330.7808
10 Mapoly0079s0055 [PTHR15496] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF12660] Putative zinc-finger of transcription factor IIIC complex; [PTHR15496:SF1] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat; [PF12657] Transcription factor IIIC subunit delta N-term35.690.7730
11 Mapoly0011s0199 [PTHR13091:SF0] SUBFAMILY NOT NAMED; [PTHR13091] AMPLIFIED IN BREAST CANCER 2-RELATED; [GO:0000184] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; [PF10220] Uncharacterized conserved protein (DUF2146)43.680.7756
12 Mapoly0167s0020 [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PF02919] Eukaryotic DNA topoisomerase I, DNA binding fragment; [KOG0981] DNA topoisomerase I; [GO:0006265] DNA topological change; [PF01028] Eukaryotic DNA topoisomerase I, catalytic core; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [GO:0005694] chromosome; [PTHR10290] DNA TOPOISOMERASE I; [PF14370] C-terminal topoisomerase domain; [K03163] DNA topoisomerase I [EC:5.99.1.2]; [5.99.1.2] DNA topoisomerase.44.790.7695
13 Mapoly0001s0567 [K01410] mitochondrial intermediate peptidase [EC:3.4.24.59]; [PTHR11804] PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED; [PTHR11804:SF5] MITOCHONDRIAL INTERMEDIATE PEPTIDASE; [GO:0004222] metalloendopeptidase activity; [3.4.24.59] Mitochondrial intermediate peptidase.; [PF01432] Peptidase family M3; [GO:0006508] proteolysis; [KOG2090] Metalloendopeptidase family - mitochondrial intermediate peptidase45.330.7710
14 Mapoly0062s0011 [KOG2654] Uncharacterized conserved protein; [K13106] pre-mRNA-splicing factor CWC26; [PTHR31809] FAMILY NOT NAMED; [PF09736] Pre-mRNA-splicing factor of RES complex45.900.7760
15 Mapoly0102s0046 [PF01585] G-patch domain; [PTHR13948] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding46.170.7570
16 Mapoly0072s0074 [GO:0003723] RNA binding; [PF02854] MIF4G domain; [GO:0005515] protein binding; [KOG2140] Uncharacterized conserved protein; [PTHR18034] CELL CYCLE CONTROL PROTEIN CWF22-RELATED; [PTHR18034:SF3] CELL CYCLE CONTROL PROTEIN CWF22; [K13100] pre-mRNA-splicing factor CWC22; [PF02847] MA3 domain46.650.7758
17 Mapoly0001s0040 [PTHR12466:SF8] SUBFAMILY NOT NAMED; [PF05179] RNA pol II accessory factor, Cdc73 family; [KOG3786] RNA polymerase II assessory factor Cdc73p; [PTHR12466] CDC73 DOMAIN PROTEIN50.080.7740
18 Mapoly0024s0101 [GO:0005515] protein binding; [PTHR12979:SF5] SUBFAMILY NOT NAMED; [K12607] CCR4-NOT transcription complex subunit 10; [PTHR12979] FAMILY NOT NAMED; [PF00515] Tetratricopeptide repeat; [KOG2471] TPR repeat-containing protein56.000.7703
19 Mapoly0039s0104 [GO:0006396] RNA processing; [3.1.26.5] Ribonuclease P.; [GO:0004526] ribonuclease P activity; [PF06978] Ribonucleases P/MRP protein subunit POP1; [K01164] ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]; [GO:0001682] tRNA 5'-leader removal; [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT; [PF08170] POPLD (NUC188) domain58.300.7743
20 Mapoly0008s0154 [KOG0379] Kelch repeat-containing proteins; [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN59.240.7069
21 Mapoly0025s0138 [PTHR12963:SF0] SUBFAMILY NOT NAMED; [PF04266] ASCH domain; [PTHR12963] THYROID RECEPTOR INTERACTING PROTEIN RELATED59.750.7399
22 Mapoly0064s0032 [GO:0005515] protein binding; [KOG1063] RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily; [PTHR13729] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [K11374] elongator complex protein 2; [PTHR13729:SF2] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [PF00400] WD domain, G-beta repeat63.500.7719
23 Mapoly0031s0160 [GO:0003723] RNA binding; [PF14608] Zinc finger C-x8-C-x5-C-x3-H type; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR10288:SF5] ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PF00013] KH domain; [GO:0046872] metal ion binding63.510.7517
24 Mapoly0016s0042 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG4393] Predicted pseudouridylate synthase; [PTHR11142:SF1] PSEUDOURIDYLATE SYNTHASE-RELATED; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase.64.060.7564
25 Mapoly0040s0004 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain64.480.7611
26 Mapoly0001s0203 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [GO:0005515] protein binding; [KOG2381] Phosphatidylinositol 4-kinase; [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN66.390.7489
27 Mapoly0074s0071 [PTHR24128] FAMILY NOT NAMED; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies)69.820.7269
28 Mapoly0019s0080 [PTHR13798:SF2] gb def: RNA binding motif protein 11 (Fragment); [GO:0003676] nucleic acid binding; [PTHR13798] RNA BINDING MOTIF(RBM)PROTEIN -RELATED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)70.100.7081
29 Mapoly0002s0128 [GO:0016020] membrane; [PF00344] SecY translocase; [GO:0015031] protein transport; [PTHR10906] SECY/SEC61-ALPHA FAMILY MEMBER73.250.7557
30 Mapoly0007s0076 [K12878] THO complex subunit 1; [PTHR13265] THO COMPLEX SUBUNIT 1; [PF11957] THO complex subunit 1 transcription elongation factor; [PTHR13265:SF0] SUBFAMILY NOT NAMED; [KOG2491] Nuclear matrix protein73.420.7522
31 Mapoly0011s0185 [KOG0919] C-5 cytosine-specific DNA methylase; [GO:0008168] methyltransferase activity; [PTHR10629] CYTOSINE-SPECIFIC METHYLTRANSFERASE; [K00558] DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]; [PF00145] C-5 cytosine-specific DNA methylase; [2.1.1.37] DNA (cytosine-5-)-methyltransferase.73.420.7606
32 Mapoly0146s0009 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE73.890.7357
33 Mapoly0122s0038 [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis; [PTHR23327:SF0] SUBFAMILY NOT NAMED75.370.7656
34 Mapoly0141s0031 -76.810.7362
35 Mapoly0164s0014 [KOG0341] DEAD-box protein abstrakt; [GO:0005524] ATP binding; [K13116] ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF20] SUBFAMILY NOT NAMED77.970.7629
36 Mapoly0122s0055 [GO:0031625] ubiquitin protein ligase binding; [PTHR11932:SF5] ANAPHASE-PROMOTING COMPLEX SUBUNIT 2; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03349] anaphase-promoting complex subunit 2; [KOG2165] Anaphase-promoting complex (APC), subunit 2; [PTHR11932] CULLIN; [PF00888] Cullin family; [PF08672] Anaphase promoting complex (APC) subunit 279.530.7576
37 Mapoly0037s0011 [PF12842] Domain of unknown function (DUF3819); [PF04054] CCR4-Not complex component, Not1; [PTHR13162:SF8] SUBFAMILY NOT NAMED; [PTHR13162] CCR4-NOT TRANSCRIPTION COMPLEX; [K12604] CCR4-NOT transcription complex subunit 181.290.7561
38 Mapoly0083s0005 [PF05773] RWD domain; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00035] Double-stranded RNA binding motif; [GO:0005515] protein binding; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold82.160.7552
39 Mapoly0190s0006 [KOG3794] CBF1-interacting corepressor CIR and related proteins; [PF10197] N-terminal domain of CBF1 interacting co-repressor CIR86.550.7539
40 Mapoly0027s0145 [PF01902] ATP-binding region; [KOG2316] Predicted ATPase (PP-loop superfamily); [PTHR12196] DOMAIN OF UNKNOWN FUNCTION 71 (DUF71)-CONTAINING PROTEIN; [PF01042] Endoribonuclease L-PSP88.020.7353
41 Mapoly0020s0141 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT90.500.7456
42 Mapoly0082s0059 -90.980.7549
43 Mapoly0154s0004 [PTHR12999] FAMILY NOT NAMED; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)91.900.7459
44 Mapoly0117s0021 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family95.250.7597
45 Mapoly0211s0012 -96.870.7533
46 Mapoly0150s0009 [PF12937] F-box-like; [PF00514] Armadillo/beta-catenin-like repeat; [KOG2120] SCF ubiquitin ligase, Skp2 component; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING97.150.7339
47 Mapoly0137s0034 [PF02676] Methyltransferase TYW3; [PTHR23245] UNCHARACTERIZED; [PF13415] Galactose oxidase, central domain; [KOG1227] Putative methyltransferase; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity97.820.7546
48 Mapoly0202s0013 [PF12937] F-box-like; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG4341] F-box protein containing LRR101.100.7498
49 Mapoly0044s0018 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [KOG0926] DEAH-box RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold101.110.7521
50 Mapoly0080s0020 [PTHR12072] CWF19, CELL CYCLE CONTROL PROTEIN; [PF04677] Protein similar to CwfJ C-terminus 1; [KOG2477] Uncharacterized conserved protein; [PTHR12072:SF5] gb def: putative protein [arabidopsis thaliana]; [PF04676] Protein similar to CwfJ C-terminus 2101.470.7440
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