Guide Gene

Gene ID
Mapoly0005s0289
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF13540] Regulator of chromosome condensation (RCC1) repeat; [PF00415] Regulator of chromosome condensation (RCC1) repeat

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0005s0289 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF13540] Regulator of chromosome condensation (RCC1) repeat; [PF00415] Regulator of chromosome condensation (RCC1) repeat 0.00 1.0000
1 Mapoly0050s0018 [PTHR14467] ARV1; [KOG3134] Predicted membrane protein; [PF04161] Arv1-like family1.730.7601
2 Mapoly0046s0029 -4.690.7633
3 Mapoly0133s0009 [PTHR11679:SF3] VACUOLAR PROTEIN SORTING-ASSOCIATED; [GO:0006904] vesicle docking involved in exocytosis; [GO:0016192] vesicle-mediated transport; [PTHR11679] VESICLE PROTEIN SORTING-ASSOCIATED; [KOG1299] Vacuolar sorting protein VPS45/Stt10 (Sec1 family); [PF00995] Sec1 family5.480.7681
4 Mapoly0093s0028 [GO:0003677] DNA binding; [PTHR11850] HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; [GO:0006355] regulation of transcription, DNA-dependent; [PF05920] Homeobox KN domain6.320.7438
5 Mapoly0167s0008 [GO:0008654] phospholipid biosynthetic process; [GO:0016780] phosphotransferase activity, for other substituted phosphate groups; [KOG3964] Phosphatidylglycerolphosphate synthase; [2.7.8.5] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.; [PTHR12586] CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE; [K00995] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]; [PTHR12586:SF1] CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE7.420.7380
6 Mapoly0051s0053 [PF14774] FAM177 family12.250.7222
7 Mapoly0005s0290 [GO:0008168] methyltransferase activity; [PF05063] MT-A70; [PTHR14475] DROSOPHILA MELANOGASTER BITHORAX COMPLEX (BX-C)-RELATED; [GO:0006139] nucleobase-containing compound metabolic process; [PTHR14475:SF2] SUBFAMILY NOT NAMED14.070.6968
8 Mapoly0062s0088 [GO:0008915] lipid-A-disaccharide synthase activity; [PTHR30372] LIPID-A-DISACCHARIDE SYNTHASE; [PF02684] Lipid-A-disaccharide synthetase; [GO:0009245] lipid A biosynthetic process14.490.7376
9 Mapoly0096s0017 [PTHR12526:SF23] ASPARAGINE-LINKED GLYCOSYLATION PROTEIN 11 HOMOLOG; [KOG1387] Glycosyltransferase; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [PTHR12526] GLYCOSYLTRANSFERASE; [K03844] alpha-1,2-mannosyltransferase [EC:2.4.1.-]; [2.4.1.-] Hexosyltransferases.15.000.6790
10 Mapoly0043s0091 [3.5.1.26] N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase.; [GO:0016787] hydrolase activity; [K01444] N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]; [PTHR10188:SF6] N(4)-(BETA-N-ACETYLGLUCOSAMINYL)-L-ASPARAGINASE; [PTHR10188] L-ASPARAGINASE; [PF01112] Asparaginase; [KOG1593] Asparaginase17.750.7224
11 Mapoly0096s0043 [PF14968] Coiled coil protein 84; [PTHR31198] FAMILY NOT NAMED18.470.7175
12 Mapoly0052s0009 -24.450.6958
13 Mapoly0041s0121 [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain24.540.7101
14 Mapoly1163s0001 [GO:0016020] membrane; [GO:0004222] metalloendopeptidase activity; [GO:0008233] peptidase activity; [GO:0071586] CAAX-box protein processing; [PF01435] Peptidase family M48; [PTHR10120] CAAX PRENYL PROTEASE 1; [GO:0006508] proteolysis24.960.7274
15 Mapoly0010s0154 [KOG4484] Uncharacterized conserved protein; [PF10153] Uncharacterised conserved protein (DUF2361)30.200.6785
16 Mapoly0055s0100 -35.070.6820
17 Mapoly0046s0019 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [KOG3396] Glucosamine-phosphate N-acetyltransferase; [PTHR13355] GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE; [K00621] glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4]; [2.3.1.4] Glucosamine-phosphate N-acetyltransferase.35.710.6740
18 Mapoly0138s0047 -35.940.6830
19 Mapoly0028s0047 [PF10283] Zinc-finger (CX5CX6HX5H) motif36.540.7089
20 Mapoly0035s0135 [PF13833] EF-hand domain pair42.050.7243
21 Mapoly0029s0047 [KOG3332] N-acetylglucosaminyl phosphatidylinositol de-N-acetylase; [PTHR12993] N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED; [PF02585] GlcNAc-PI de-N-acetylase43.950.6593
22 Mapoly0001s0293 [PTHR23106] FAMILY NOT NAMED; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding45.890.6733
23 Mapoly0125s0040 [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [KOG2940] Predicted methyltransferase; [GO:0008152] metabolic process; [PTHR13090] UNCHARACTERIZED49.510.7004
24 Mapoly0003s0229 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain51.300.6476
25 Mapoly0019s0002 [PTHR12176] UNCHARACTERIZED; [KOG2352] Predicted spermine/spermidine synthase52.750.5996
26 Mapoly0065s0092 [PTHR24012] FAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)55.510.6027
27 Mapoly0010s0070 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0008270] zinc ion binding; [PTHR11685] RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING); [KOG1812] Predicted E3 ubiquitin ligase; [PF01485] IBR domain; [GO:0046872] metal ion binding; [PF13456] Reverse transcriptase-like58.960.6792
28 Mapoly0120s0015 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071:SF152] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [KOG0885] Peptidyl-prolyl cis-trans isomerase; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K12737] peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.59.140.7118
29 Mapoly0064s0067 [KOG2989] Uncharacterized conserved protein; [PTHR12111:SF1] UNCHARACTERIZED; [PF04502] Family of unknown function (DUF572); [PTHR12111] CELL CYCLE CONTROL PROTEIN CWF16-RELATED60.600.7155
30 Mapoly0104s0041 [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily; [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF06813] Nodulin-like61.770.6581
31 Mapoly0028s0096 -63.780.6833
32 Mapoly0006s0011 -64.900.6823
33 Mapoly0140s0034 -67.170.6953
34 Mapoly0004s0235 [K12115] clock-associated PAS protein ZTL; [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [GO:0005515] protein binding; [KOG4693] Uncharacterized conserved protein, contains kelch repeat; [GO:0004871] signal transducer activity; [PF13426] PAS domain; [GO:0007165] signal transduction; [PF00646] F-box domain69.650.6968
35 Mapoly0123s0027 [GO:0042127] regulation of cell proliferation; [K05954] protein farnesyltransferase subunit beta [EC:2.5.1.58]; [2.5.1.58] Protein farnesyltransferase.; [KOG0366] Protein geranylgeranyltransferase type II, beta subunit; [PF13249] Prenyltransferase-like; [GO:0005965] protein farnesyltransferase complex; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [GO:0018343] protein farnesylation; [PTHR11774:SF6] PROTEIN FARNESYLTRANSFERASE BETA SUBUNIT (CAAX FARNESYLTRANSFERASE BETA SUBUNIT) (RAS PROTEINS PRENYLTRANSFERASE BETA) (FTASE-BETA)70.430.6856
36 Mapoly0001s0234 [PTHR21230] VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED; [KOG3251] Golgi SNAP receptor complex member; [K08496] golgi SNAP receptor complex member 2; [PF12352] Snare region anchored in the vesicle membrane C-terminus; [PTHR21230:SF1] MEMBRIN72.950.7041
37 Mapoly0001s0482 [PF05764] YL1 nuclear protein; [KOG2897] DNA-binding protein YL1 and related proteins; [GO:0006355] regulation of transcription, DNA-dependent; [PF08265] YL1 nuclear protein C-terminal domain; [K11664] vacuolar protein sorting-associated protein 72; [GO:0005634] nucleus; [PTHR13275] YL-1 PROTEIN (TRANSCRIPTION FACTOR-LIKE 1)75.780.7029
38 Mapoly0112s0019 [GO:0003723] RNA binding; [PTHR15838:SF1] SUBFAMILY NOT NAMED; [PF00575] S1 RNA binding domain; [PTHR15838] FAMILY NOT NAMED77.070.7004
39 Mapoly0047s0037 [PTHR13299] UNCHARACTERIZED; [PTHR13299:SF0] SUBFAMILY NOT NAMED; [KOG4546] Peroxisomal biogenesis protein (peroxin 16); [K13335] peroxin-16; [PF08610] Peroxisomal membrane protein (Pex16)77.650.6496
40 Mapoly0036s0155 [PF11510] Fanconi Anaemia group E protein FANCE; [PTHR32094] FAMILY NOT NAMED79.080.6831
41 Mapoly0023s0081 [GO:0003677] DNA binding; [PF03791] KNOX2 domain; [PF03790] KNOX1 domain; [GO:0005634] nucleus80.600.7057
42 Mapoly0138s0006 [GO:0070985] TFIIK complex; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016538] cyclin-dependent protein serine/threonine kinase regulator activity; [GO:0019901] protein kinase binding; [PTHR10026:SF8] CYCLIN H; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [KOG2496] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit; [GO:0006351] transcription, DNA-dependent; [K06634] cyclin H; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity81.670.6787
43 Mapoly0023s0038 [PF13917] Zinc knuckle; [PTHR13491] ZCCHC10 PROTEIN82.090.5895
44 Mapoly0021s0149 [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding82.310.6948
45 Mapoly0007s0033 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN85.730.6867
46 Mapoly0036s0080 [PF07524] Bromodomain associated; [PF10406] Transcription factor TFIID complex subunit 8 C-term; [PTHR23307:SF0] SUBFAMILY NOT NAMED; [PTHR23307] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8; [KOG2389] Predicted bromodomain transcription factor86.630.6902
47 Mapoly0028s0019 [K07359] calcium/calmodulin-dependent protein kinase kinase [EC:2.7.11.17]; [GO:0005524] ATP binding; [PTHR24347] SERINE/THREONINE-PROTEIN KINASE; [PF00069] Protein kinase domain; [PTHR24347:SF1] CALCIUM/CALMODULIN DEPENDENT PROTEIN KINASE KINASE 1; [2.7.11.17] Calcium/calmodulin-dependent protein kinase.; [GO:0004672] protein kinase activity; [KOG0616] cAMP-dependent protein kinase catalytic subunit (PKA); [GO:0006468] protein phosphorylation88.430.6842
48 Mapoly0042s0034 [PTHR23131:SF0] SUBFAMILY NOT NAMED; [KOG0813] Glyoxylase; [PF00753] Metallo-beta-lactamase superfamily; [PTHR23131] METALLO-BETA-LACTAMASE RELATED88.460.6933
49 Mapoly0032s0094 [KOG1533] Predicted GTPase; [PTHR21231:SF3] XPA-BINDING PROTEIN 1-RELATED; [GO:0000166] nucleotide binding; [K06883] 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]; [PTHR21231] XPA-BINDING PROTEIN 1-RELATED; [PF03029] Conserved hypothetical ATP binding protein90.650.6843
50 Mapoly0147s0040 -92.200.6200
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