Guide Gene

Gene ID
Mapoly0001s0353
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005515] protein binding; [PF11566] PI31 proteasome regulator N-terminal; [PTHR15537] FAMILY NOT NAMED; [PF00646] F-box domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0353 [GO:0005515] protein binding; [PF11566] PI31 proteasome regulator N-terminal; [PTHR15537] FAMILY NOT NAMED; [PF00646] F-box domain 0.00 1.0000
1 Mapoly0014s0208 [KOG1587] Cytoplasmic dynein intermediate chain; [GO:0005515] protein binding; [PTHR12442:SF5] TESTIS DEVELOPMENT PROTEIN NYD-SP29; [PTHR12442] DYNEIN INTERMEDIATE CHAIN; [PF00400] WD domain, G-beta repeat4.240.7813
2 Mapoly0032s0156 [PF14652] Domain of unknown function (DUF4457); [PTHR21534] UNCHARACTERIZED; [PTHR21534:SF0] SUBFAMILY NOT NAMED7.000.7827
3 Mapoly0014s0032 [PTHR14873] FAMILY NOT NAMED; [PF10521] Protein of unknown function (DUF2454); [PTHR14873:SF1] SUBFAMILY NOT NAMED9.380.7568
4 Mapoly0063s0002 [PF01480] PWI domain; [K13171] serine/arginine repetitive matrix protein 1; [PTHR23148] SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN; [GO:0006397] mRNA processing; [KOG2146] Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain)10.390.7776
5 Mapoly0096s0073 [PF13964] Kelch motif; [PTHR24412] FAMILY NOT NAMED14.700.7177
6 Mapoly0013s0166 [KOG1731] FAD-dependent sulfhydryl oxidase/quiescin and related proteins; [GO:0016972] thiol oxidase activity; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PTHR22897:SF8] SUBFAMILY NOT NAMED; [PTHR22897] QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE; [PF04777] Erv1 / Alr family; [PF00085] Thioredoxin17.150.7274
7 Mapoly0001s0420 [PTHR16212:SF4] SUBFAMILY NOT NAMED; [PF12530] Protein of unknown function (DUF3730); [PTHR16212] FAMILY NOT NAMED18.570.7235
8 Mapoly0009s0092 -18.710.7077
9 Mapoly0154s0010 -20.710.7293
10 Mapoly0038s0101 [K12837] splicing factor U2AF 65 kDa subunit; [PTHR23139] RNA-BINDING PROTEIN; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0120] Splicing factor U2AF, large subunit (RRM superfamily); [GO:0003676] nucleic acid binding; [PTHR23139:SF9] SPLICING FACTOR U2AF LARGE SUBUNIT; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)21.790.7557
11 Mapoly0041s0148 [PF01426] BAH domain; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR22.360.7351
12 Mapoly0007s0152 [PTHR23147] SERINE/ARGININE RICH SPLICING FACTOR; [KOG4207] Predicted splicing factor, SR protein superfamily; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)24.370.7352
13 Mapoly0067s0005 [PTHR24012] FAMILY NOT NAMED; [PTHR24012:SF39] SUBFAMILY NOT NAMED; [KOG0147] Transcriptional coactivator CAPER (RRM superfamily); [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [K13091] RNA-binding protein 39; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)26.610.7402
14 Mapoly0072s0033 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family26.870.7147
15 Mapoly0125s0028 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0205] Plasma membrane H+-transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase29.260.7369
16 Mapoly0001s0473 -30.280.7397
17 Mapoly0043s0039 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PF13771] PHD-like zinc-binding domain31.300.7029
18 Mapoly0080s0074 -33.500.7110
19 Mapoly0065s0067 [PTHR13165] ARSENITE-RESISTANCE PROTEIN 2; [PF12066] Domain of unknown function (DUF3546); [PF04959] Arsenite-resistance protein 2; [KOG2295] C2H2 Zn-finger protein; [PTHR13165:SF0] SUBFAMILY NOT NAMED36.500.7306
20 Mapoly0187s0003 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [K06062] histone acetyltransferase [EC:2.3.1.48]; [GO:0005515] protein binding; [PF00439] Bromodomain; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [2.3.1.48] Histone acetyltransferase.37.150.7138
21 Mapoly0169s0013 -38.340.6787
22 Mapoly0048s0088 [PF00397] WW domain; [GO:0005515] protein binding; [K12824] transcription elongation regulator 1; [PTHR15377:SF3] SUBFAMILY NOT NAMED; [PTHR15377] TRANSCRIPTION FACTOR CA150B RELATEDTCERG1; [PF01846] FF domain; [KOG0155] Transcription factor CA15039.520.7314
23 Mapoly0027s0185 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24056:SF39] CDC2-RELATED PROTEIN KINASE; [KOG0600] Cdc2-related protein kinase; [K08819] Cdc2-related kinase, arginine/serine-rich [EC:2.7.11.22]; [2.7.11.22] Cyclin-dependent kinase.; [PTHR24056] CELL DIVISION PROTEIN KINASE40.000.7181
24 Mapoly0014s0037 [PTHR22850] WD40 REPEAT FAMILY40.400.6738
25 Mapoly0084s0037 [GO:0046983] protein dimerization activity; [PTHR11800:SF2] DNA-DIRECTED RNA POLYMERASE II SUBUNIT 3; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF01000] RNA polymerase Rpb3/RpoA insert domain; [KOG1522] RNA polymerase II, subunit POLR2C/RPB3; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11800] DNA-DIRECTED RNA POLYMERASE; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PF01193] RNA polymerase Rpb3/Rpb11 dimerisation domain42.580.6735
26 Mapoly0075s0016 [PTHR15830] FAMILY NOT NAMED; [PF10193] Telomere length regulation protein42.770.6976
27 Mapoly0123s0009 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF13540] Regulator of chromosome condensation (RCC1) repeat; [PF00415] Regulator of chromosome condensation (RCC1) repeat45.610.5438
28 Mapoly0013s0178 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00515] Tetratricopeptide repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR46.740.7103
29 Mapoly0107s0024 [GO:0005524] ATP binding; [GO:0046982] protein heterodimerization activity; [KOG0018] Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1); [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR18937:SF12] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC1; [GO:0007064] mitotic sister chromatid cohesion; [PTHR18937] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0008278] cohesin complex; [GO:0051276] chromosome organization; [GO:0005694] chromosome; [PF06470] SMC proteins Flexible Hinge Domain; [K06636] structural maintenance of chromosome 147.370.7179
30 Mapoly0038s0047 [PTHR20929] LUNG ADENOMA SUSCEPTIBILITY 1-RELATED50.440.7090
31 Mapoly0029s0023 -52.150.6552
32 Mapoly0001s0024 [GO:0005634] nucleus; [GO:0003677] DNA binding; [KOG2402] Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein); [GO:0006352] DNA-dependent transcription, initiation; [GO:0016570] histone modification; [PTHR13115:SF8] SUBFAMILY NOT NAMED; [PF03126] Plus-3 domain; [PTHR13115] UNCHARACTERIZED53.050.7119
33 Mapoly0096s0071 -53.890.6950
34 Mapoly0004s0132 -58.310.6793
35 Mapoly0010s0030 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [GO:0005515] protein binding; [PF00439] Bromodomain58.740.6989
36 Mapoly0004s0118 [KOG0121] Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily); [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)60.930.6634
37 Mapoly0056s0123 [KOG2494] C3H1-type Zn-finger protein; [PTHR12675] MUSCLEBLIND-LIKE PROTEIN61.020.6602
38 Mapoly0009s0245 [PF00397] WW domain; [GO:0005515] protein binding; [KOG0144] RNA-binding protein CUGBP1/BRUNO (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)61.160.6899
39 Mapoly0047s0018 [PF02080] TrkA-C domain; [KOG0956] PHD finger protein AF10; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006813] potassium ion transport; [PF03600] Citrate transporter; [PTHR10283] SOLUTE CARRIER FAMILY 13 MEMBER; [GO:0008324] cation transmembrane transporter activity61.800.6629
40 Mapoly0029s0099 [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR23336:SF7] SUBFAMILY NOT NAMED; [KOG1845] MORC family ATPases; [PTHR23336] ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.63.750.6950
41 Mapoly0005s0105 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR64.310.6745
42 Mapoly0052s0068 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE64.950.6680
43 Mapoly0008s0026 [GO:0019773] proteasome core complex, alpha-subunit complex; [PTHR11599:SF14] PROTEASOME SUBUNIT ALPHA TYPE 5; [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0176] 20S proteasome, regulatory subunit alpha type PSMA5/PUP2; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA65.730.6770
44 Mapoly0011s0007 -66.000.6780
45 Mapoly0015s0190 -66.810.6849
46 Mapoly0069s0005 [PF11919] Domain of unknown function (DUF3437); [KOG1851] Uncharacterized conserved protein; [K06699] proteasome activator subunit 4; [PTHR32170] FAMILY NOT NAMED67.450.6633
47 Mapoly0005s0268 -71.480.6856
48 Mapoly0139s0023 -71.480.6608
49 Mapoly0072s0016 [GO:0005515] protein binding; [PTHR15398] BROMODOMAIN-CONTAINING PROTEIN 8; [PF00439] Bromodomain; [K11321] bromodomain-containing protein 8; [PTHR15398:SF0] SUBFAMILY NOT NAMED71.780.6764
50 Mapoly0045s0119 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR13161] SPLICING FACTOR (SUPPRESSOR OF WHITE APRICOT); [PF01805] Surp module; [PF09750] Alternative splicing regulator; [KOG1847] mRNA splicing factor72.680.6833
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