Guide Gene

Gene ID
g1510
Organism
Synechococcus elongatus PCC 7942
Platform ID
PCC7942
Description
RNA polymerase sigma factor SigF

    Coexpressed Gene Network
    Gene Information

Coexpressed Gene List


Synechococcus elongatus PCC 7942
Rank Gene ID Description MR PCC
Guide g1510 RNA polymerase sigma factor SigF 0.00 1.0000
1 g1352 Acetyl-CoA synthetase 2.00 0.8653
2 g1225 Phycocyanobilin:ferredoxin oxidoreductase 4.00 0.8376
3 g2243 Glutamate-5-semialdehyde dehydrogenase 4.00 0.7483
4 g0415 Hypothetical protein 4.90 0.7937
5 g0309 NAD(P)H-quinone oxidoreductase subunit F 6.00 0.7594
6 g1054 PBS lyase HEAT-like repeat 6.93 0.7808
7 g0451 Esterase 8.06 0.7624
8 g0433 Hypothetical protein 9.49 0.7197
9 g2503 Protochlorophyllide oxidoreductase 9.54 0.7515
10 g2322 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 9.80 0.7292
11 g2439 Beta-carotene hydroxylase 9.95 0.7301
12 g1906 Hypothetical protein 10.20 0.7254
13 g2188 Isochorismate synthase 13.27 0.7160
14 g0407 Photosystem I reaction center subunit X 14.07 0.7417
15 g0849 Hypothetical protein 14.70 0.7029
16 g2010 Cytochrome c550 15.49 0.7337
17 g1882 Photosystem II complex extrinsic protein precursor PsuB 18.76 0.6873
18 g2030 Phycobilisome rod-core linker polypeptide 20.98 0.6987
19 g0215 Hypothetical protein 21.82 0.7069
20 g0143 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component 21.98 0.6893
21 g2504 Hypothetical protein 22.45 0.6280
22 g0551 Hypothetical protein 22.80 0.6801
23 g2321 Photosystem I assembly protein Ycf3 24.27 0.7013
24 g1099 Ubiquinone/menaquinone biosynthesis methyltransferase 24.39 0.6523
25 g0674 Coproporphyrinogen III oxidase 24.82 0.7216
26 gB2647 Response regulator receiver domain protein (CheY-like) 25.98 0.5538
27 g1845 Hypothetical protein 27.15 0.5711
28 g0326 Allophycocyanin, beta subunit 27.28 0.6824
29 g0325 Lc 7.8 apoprotein (core components of the phycobilisomes) 27.39 0.6672
30 g1718 Glycolate oxidase subunit GlcE 27.46 0.6715
31 g1274 TPR repeat 27.50 0.6736
32 g0920 Photosystem I reaction center 28.37 0.6848
33 g2476 Hypothetical protein 28.77 0.6192
34 gB2645 Hypothetical protein 29.48 0.5449
35 g1858 Heme oxygenase (decyclizing) 30.41 0.6812
36 g0504 Glutamyl-tRNA reductase 31.61 0.6454
37 g0781 Phosphoenolpyruvate synthase 34.29 0.6732
38 g0240 Hypothetical protein 34.99 0.6494
39 g0236 Cyclic nucleotide-binding domain (cNMP-BD) protein 35.41 0.6543
40 g0276 Glycolate oxidase subunit GlcD 35.41 0.6452
41 g0593 Hypothetical protein 35.62 0.6176
42 g1002 Photosystem I reaction center subunit II 35.71 0.6065
43 g1717 Glycolate oxidase subunit (Fe-S) protein 35.78 0.6633
44 g0089 Carboxymethylenebutenolidase 35.87 0.6429
45 g0294 Photosystem II manganese-stabilizing polypeptide 35.94 0.6540
46 g2137 Magnesium chelatase 37.76 0.6633
47 g0349 Hypothetical protein 38.11 0.6242
48 g1792 Delta-aminolevulinic acid dehydratase 39.05 0.5823
49 g1345 NADH dehydrogenase subunit J 39.50 0.5485
50 g0462 Hypothetical protein 40.07 0.5582
51 g0237 Hypothetical protein 40.35 0.5559
52 g2342 Photosystem I reaction center protein subunit XI 41.00 0.6303
53 g1407 Iron(III) ABC transporter permease protein 41.41 0.6101
54 g1852 Precorrin-8X methylmutase 44.50 0.6201
55 g0918 Long-chain-fatty-acid CoA ligase 48.37 0.5846
56 g1633 Hypothetical protein 48.37 0.4508
57 gB2622 Probable chromate transport transmembrane protein 48.74 0.5261
58 gB2635 Hypothetical protein 49.94 0.5883
59 g1343 NADH dehydrogenase subunit H 52.46 0.5286
60 g1476 Hypothetical protein 53.58 0.5025
61 g1143 Hypothetical protein 54.47 0.6250
62 g0385 Geranylgeranyl reductase 54.99 0.6122
63 g2605 Hypothetical protein 55.44 0.6014
64 g0645 Glutamate-1-semialdehyde aminotransferase 55.86 0.6026
65 g0620 Hypothetical protein 63.17 0.4911
66 g2403 Hypothetical protein 63.62 0.5891
67 g0214 Hypothetical protein 64.11 0.4471
68 g1851 Ferredoxin--nitrite reductase 67.16 0.5989
69 g2038 Transcriptional regulator, XRE family with cupin sensor domain 67.35 0.5973
70 g2234 NADH dehydrogenase I subunit N 67.51 0.5122
71 gB2660 Hypothetical protein 67.99 0.5657
72 g1091 Hypothetical protein 68.09 0.4656
73 g1016 CheW protein 68.64 0.5521
74 g1250 Photosystem I reaction center subunit III precursor 69.99 0.5588
75 g0946 UDP-galactopyranose mutase 70.48 0.4868
76 g1984 Phytoene synthase 70.87 0.5992
77 g1776 Hypothetical protein 72.00 0.5585
78 g1052 Phycocyanin, beta subunit 76.06 0.5200
79 g1046 Hypothetical protein 76.41 0.4408
80 g2152 Hypothetical protein 77.19 0.5878
81 g0710 Hypothetical protein 77.79 0.5699
82 gB2623 Cysteine synthase A 79.18 0.4801
83 g0607 Hypothetical protein 80.37 0.5078
84 gB2646 Two-component sensor histidine kinase 80.37 0.4048
85 g0939 Adenylylsulfate kinase 82.46 0.6084
86 g0414 Hypothetical protein 85.70 0.4995
87 g2160 Alanine-glyoxylate aminotransferase 86.49 0.6309
88 g1631 TPR repeat 89.64 0.5383
89 g0053 Hypothetical protein 90.50 0.5175
90 g0993 Hypothetical protein 93.17 0.5766
91 g1349 Hypothetical protein 93.17 0.4258
92 g1826 MRNA-binding protein 93.24 0.4214
93 g1047 Phycocyanin, beta subunit 93.64 0.4792
94 g1053 Phycocyanin, alpha subunit 96.12 0.5488
95 g2449 1-Cys peroxiredoxin 98.48 0.4228
96 g2048 Photosystem I P700 chlorophyll a apoprotein A2 98.87 0.3913
97 g0863 Hypothetical protein 99.14 0.5327
98 g0917 Hypothetical protein 101.49 0.5007
99 g1987 Hypothetical protein 102.62 0.5178
100 g1048 Phycocyanin, alpha subunit 104.67 0.5347
101 g0333 F0F1 ATP synthase subunit B' 105.17 0.5590
102 g1752 Armadillo:PBS lyase HEAT-like repeat 106.35 0.5286
103 g1660 Potassium channel protein 106.82 0.4169
104 g1159 Transcriptional regulator, MarR family 109.44 0.3694
105 g2361 Glutamate racemase 110.20 0.3937
106 g0327 Allophycocyanin alpha chain 110.27 0.5402
107 g2343 Photosystem I reaction center subunit VIII 110.36 0.4726
108 g1881 L-aspartate oxidase 110.84 0.5755
109 g1946 Hypothetical protein 112.50 0.4768
110 g1545 Plasmid stabilization protein StbB-like 114.72 0.3627
111 g1914 Hypothetical protein 115.10 0.5140
112 g0122 EAL 115.79 0.4643
113 g1357 Multi-sensor signal transduction histidine kinase 118.36 0.4476
114 g1346 NADH dehydrogenase subunit K 118.44 0.4102
115 gB2663 Putative serine acetyltransferase 118.72 0.3574
116 g0324 Cell division protein FtsW 119.22 0.4963
117 g2037 Hypothetical protein 119.34 0.4396
118 g1126 ABC transporter permease protein 119.66 0.4545
119 g2282 GAF sensor signal transduction histidine kinase 119.95 0.4826
120 g2161 Hypothetical protein 121.33 0.5738
121 g1823 PBS lyase HEAT-like repeat 121.97 0.4047
122 g0329 Hypothetical protein 122.40 0.5729
123 g1913 Hypothetical protein 123.55 0.5070
124 g1003 Anthranilate synthase, component I 126.41 0.5309
125 g2039 Hypothetical protein 127.15 0.4700
126 g0430 1-deoxy-D-xylulose-5-phosphate synthase 127.66 0.5067
127 g1098 Hypothetical protein 128.45 0.4625
128 g0096 Hypothetical protein 128.70 0.4999
129 g1086 Uroporphyrinogen decarboxylase 130.25 0.5730
130 g0065 Translation initiation factor IF-3 130.49 0.4503
131 g1630 Cytochrome c553 132.82 0.4664
132 g0187 Hypothetical protein 133.29 0.4588
133 gB2664 Cysteine synthase 133.60 0.3772
134 g0171 Cysteine synthase A 134.70 0.3702
135 g2056 Hypothetical protein 139.14 0.4656
136 g0503 Hypothetical protein 140.39 0.4480
137 g2534 Diguanylate cyclase with GAF sensor 140.39 0.4341
138 g1170 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 140.64 0.4506
139 g2089 Thioredoxin domain 2 140.76 0.4554
140 g0328 Phycobilisome core-membrane linker polypeptide 141.07 0.4873
141 g0151 Response regulator receiver modulated diguanylate cyclase 142.99 0.4349
142 g0308 CO2 hydration protein 145.33 0.4214
143 g0901 Haloalkane dehalogenase 145.40 0.5399
144 g2592 Orotate phosphoribosyltransferase 145.83 0.3740
145 g1743 NAD(P)H-quinone oxidoreductase subunit H 146.14 0.3894
146 g2409 Adenylosuccinate synthetase 146.69 0.4895
147 g2501 Phospho-2-dehydro-3-heoxyheptonate aldolase 147.21 0.4039
148 g1125 Putative CheA signal transduction histidine kinase, no good domain identification 147.31 0.4637
149 g1894 Integral membrane protein of the ABC-type Nat permease for neutral amino acids 148.84 0.3777
150 g1092 Hypothetical protein 152.72 0.4694
151 gR0025 TRNA-Asn 153.35 0.4725
152 g1912a Photosystem I reaction center subunit XII 154.24 0.3849
153 g1975 Hypothetical protein 154.51 0.4458
154 g2158 Allophycocyanin, beta subunit 155.15 0.4487
155 g1025 TPR repeat 159.20 0.3973
156 g0062 Glucose-1-phosphate cytidylyltransferase 162.69 0.4283
157 g2073 Heat shock protein Hsp70 164.10 0.3834
158 g1587 Integral membrane protein-like 164.95 0.4292
159 g0896 Septum site-determining protein MinD 164.97 0.4776
160 g0678 3'-5' exonuclease 167.50 0.4086
161 g2057 Acyl-phosphate glycerol-3-phosphate acyltransferase 169.83 0.4747
162 g1824 CBS 172.70 0.4552
163 g1055 Phycocyanin alpha-subunit phycocyanobilin lyase 174.30 0.5041
164 g1893 ATPase 174.90 0.3886
165 g0452 Hypothetical protein 177.52 0.3878
166 g0864 Hypothetical protein 179.40 0.4283
167 g2244 Riboflavin synthase subunit beta 179.44 0.4403
168 gR0043 TRNA-Thr 181.05 0.4334
169 g0082 ATPase 182.42 0.5118
170 g1298 Diguanylate cyclase (GGDEF domain) 182.44 0.3964
171 g0330 Hypothetical protein 183.99 0.4257
172 g0406 Hypothetical protein 184.45 0.4212
173 g2352 Sigma 54 modulation protein / SSU ribosomal protein S30P 186.00 0.3929
174 g0978 Ferredoxin-NADP oxidoreductase 186.69 0.4254
175 g1499 Ferredoxin (2Fe-2S) 191.59 0.3675
176 g0758 Hypothetical protein 193.00 0.3859
177 g1860 Two component transcriptional regulator, LuxR family 195.27 0.3801
178 g2353 Lipoyltransferase 198.52 0.4325
179 g1014 CheA signal transduction histidine kinase 199.84 0.3872
180 g1323 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase 200.16 0.4482
181 g0267 Glucose-inhibited division protein B 201.52 0.4385
182 g0321 Nitrogen regulatory protein P-II 201.91 0.3727
183 g0697 Photosystem II core light harvesting protein 202.58 0.4388
184 g0073 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 202.64 0.4001
185 g1001 Aspartate kinase 202.68 0.4925
186 g1853 Cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase 202.88 0.3847
187 g1373 Hydrogenase accessory protein 203.70 0.3867
188 g0179 Secretion chaperone CsaA 204.29 0.4334
189 g0759 Hypothetical protein 207.47 0.3772
190 g2341 Cobalt transport system permease protein 207.97 0.3531
191 g2453 Type IV pilus assembly protein PilM 209.13 0.3940
192 gB2656 Hypothetical protein 214.94 0.3456
193 g2545 Aspartate aminotransferase 217.14 0.4741
194 g2367 Hypothetical protein 217.62 0.3937
195 g0246 Extracellular solute-binding protein, family 3 220.25 0.3946
196 g2502 Hypothetical protein 222.92 0.3670
197 gB2624 Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 224.61 0.3528
198 g0535 Photosystem I subunit VII 226.78 0.3316
199 g1309 Hypothetical protein 227.75 0.3385
200 g1976 NAD(P)H-quinone oxidoreductase subunit D 228.34 0.4238